RLG00000015743

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0002858
Physical Location & Seq
Reverse (-)
1128558 .. 1132370
3813 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000015743

Sequence Viewer

Length: 3084 bp
ATGAGTGAGAAAGAAGCCATAGATTGTGATGAAGGTTCATCAAGTTCTGATAGAACCAAAAAGGAAGAAGCTTTATTATGTTCTGCTAAGCTTCACATAGAAGAAATCCGGACCCAGAAATTCTCTATTGGTAAAAACCAATCTTTTCCTTTAACTCAAGACTTTCATTTTGCTGTAACCAACCTCTCAAAGCAGCTTTATCAAAAAGACTCAAACTTTTTGATGGAACTCATCCTAAATGCAGATGAGAATGAATACAGAGAAGGTGTGGAGCCAACTTTGGAGTTTGTGATGACCCCAAAAGACATAACTGGGACTGAAGCACCAGCCACTCTGCTGGTTTTTAATAATGAGGTTGGATTTTCCAGGGAGAACATGGATTCCATTTGTGGTTTGGGCCATTCTACAAAGAAGGACAAGAGACAGCAGAGTCTTATTGGAGAGAGAGGCAGTGGATTTAAAAGTGTATTTCTTGTGAGTTCACAGCCACACATAATTAGCAACGGTTATTGGGTCAGATTCTTGGAAGAACCAGATCAAGATTGTGGTATTGGTTATATAGTTCCCCATTGGGTTAGTGGAGAGCCTTCTCTTTCTAGCATATTAGATGTTTGTGGGTTATGCAATGTCTTGCCTACTACCATGATTATTCTTCCTCTGAAGCCTGAGAAGGTTGAAGCCGTGAGAGTTCAATTGTCACAATTGCGTCCAGAGATTCTCTTGTTCTTGTCCAAGCTAAAGCGAGTACATGTACGCGGGTGTGATCCTGAAGCAGTAGATGATGTCTCAAGGTTTTGTAAAACTAGTGGGACTGAACAAATGGAGTTATATAAAGCCACGTCACGTGTTGTTCAACTCTCAGTTAAGCAAAGAAAGGGTGATAGTGAGGAGTTGTGCAAGTATTACTTGTGGGAGGAGGCATTTCCCGTAAAACCTGCTAATAGAGTTGGTATAAGGATGAATGTGCAGAAATGGGTGATTACCCTTGCTTTTCCATCCAGAGAAAGAATGGGGAAGGCAACTTCTTCTGTTGGTATATTTGCTTGCCTGCCCACGGAAATGGTCACAAACTTCCCATTTCTCATTCAAGCAGACTTCATTCTGAATGCTTCACGAGATTGTATACTGTTAGAGAACGTATGGAACTTGGGAATTCTTGAGTGTATCCCATCATTATTTGTGGATGCTTTTCAGTCTCACTCCCTCCATTCTTCAGTGGATGAGCCATTTGAATATTTGCCAGCTCAAGCTTCACCAATTCCTGAGTTTAACAAGGTAAGAGAGTCCATTAGAACTAGATTGCAAAGTTTAGTGATAGTGCCTTGCCAAATACTTGAGGGCACACTTTCCTTCGTGCTGCCTCAAAATGCAGTTCGAGTCCTGCCAAAATTTAGGGACCTAGTGATTGGAATTAGAGCGAAGGGTAATGTTTTGAGTGGTTCATCTTCATCTTTATTGAGGAGAGTCTTGCATCCGACTCTGGACCTTGAAAAGTACAATGCAGTTCTGAAGTTTCTAGATGTGAAATGTGCTGATAATCATTGGTATACAAAATGCGTCGAAGGTCTCTGCAACCCCACTGAGGATGAAATGGTTATAGCAGATAGCATTATTTCGTTGCTAGAGTGTATCAAGTTTCTGATGTCAAGCTCTCTTGATGATCCCTTGGTGCATGACTTCATCAAGAGCATTGCAAAAAGCAGGTTTTTGAAGACCTTGAATGGTTATAAAACACCAGAAGAATGTGTTCTGTTTGATCCTGCCTGGGAAAGTATTCTGAATCGGACAGATACACCGACCATTGATGTAAATTTTTACGGAACTGAAATTTTTCAGTACAAGAATCAGTTGAGAGATATTGGCGTGAAGGTTGATCCTTTGAGTGTTTGTTCTTTTTTTTCTGGAATTCTGACCAAGCTGGCAAACCAGCCTCATTCTTGTTATACACCAGACACTGCCTTTATAACGAGGATTTACAGCTTCCTCAACAAGTTCCACTGGCATCCAGAAGCACCAGATGAAAGCCAATTTCAGGTGTGGATTCCTGACCCTCCTCCAGGTGGATGGATTATGCCTCAGCAATGTGTACTTCATGTCAATCATGCTAGGAAGTATCTGTTTAGCTCATTCTTTTGGCTTGACGAACTTTACACTGAAGAGCTCCTCCCCTTGTTTTCTTCAGCCTTTGGGGTTGCAGAAAATCCTTCCATCCATCATTACTTAAAGCTATGGGAAACATGGGCGTCATCGGAGAACTTGCAAGTGACTCTGGTAGAGTGCTGCTCCTTCTGGGAAACAGAAGTGTTCCTAGCTGATGAATTGCAACTGAAGAAAACTTTCCTGAGCTATGACGAGGCCCCATTGTTCGTGTGGTTTCCCACAAGCAACTGCTTGTCATCTGTTCCTCCTAGAAGACTTCATGACATTTACGAGTCCCTTGGAGTAAGGAAGGTGTCCGAGTCATTTGTGTGCAAACCGCATACCATCCTATTATTGGAGGACCTGGATAAGATTGATGCACAAGATCGATTGATTGGCAGGGGTTTAATCAAACTTATTTTGGGTTTTCTTGCTGGTCCGGAGGTTAATATGCCATTGAAAGAGAGACATAATGCCGCATGCTCACTCATTAAACTATCAGTGTATAAACTTGAGAGACCAAATCAAGTCATTTATCGACTGATGCCATCTGCGAGTACAACAGTGGATGTAAAAAAAGTGAAGCTAGTTACCTGGAAGAAGATTTCTCATCGTTTGCTCATTGATAACTCAGGCTACAGAAATGGAAAATCTGATCCAGAATTTGTTACTGCTTTCGCTGATGAACTCGCTCAAGGACTGTTAGTGCAGCCAAGACATTATGCAGCAGCACTGAGCAAACTTATCCAATGGGGATTTATATTCGATTTTAATGAGAAGGAAGTGATGAGAGAAAATTTAGAGTTGCCTATGGAAGATAAGGAGTTTCTTAATGCTGCATTCCTCTCATCAACAGAACTTGTTTGTGGGAAGCGGTCATCTATGGAGACGGAGGAATCAGGCCCTTCCATAGCGATGTCCTCATGCAAGAAGCCGCGTCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1028

Amino Acids

116.51

Weight (kDa)

5.71

Isoelectric Point (pI)

42.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SACS PF25794 77 - 172 4.3e-08 Sacsin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1728, 1964
AasI GACNNNNNNGTC 1 cut(s) 429
Acc36I ACCTGC 2 cut(s) 943, 1692
AccI GTMKAC 2 cut(s) 1123, 1547
AccII CGCG 2 cut(s) 756, 3076
AccIII TCCGGA 2 cut(s) 108, 2578
AciI CCGC 5 cut(s) 756, 2477, 2616, 3013, 3074
AclWI GGATC 5 cut(s) 758, 1655, 1751, 1868, 2789
AcsI RAATTY 8 cut(s) 119, 1152, 1388, 1810, 1827, 1905, 2801, 2935
AcuI CTGAAG 8 cut(s) 339, 680, 789, 1197, 1529, 2163, 2175, 2348
AcvI CACGTG 1 cut(s) 845
AcyI GRCGYC 1 cut(s) 2243
AfaI GTAC 6 cut(s) 747, 753, 1496, 1838, 2088, 2698
AfiI CCNNNNNNNGG 6 cut(s) 1054, 1582, 2032, 2057, 2060, 2494
AflIII ACRYGT 2 cut(s) 748, 844
AgsI TTSAA 9 cut(s) 677, 692, 854, 1088, 1232, 1490, 1711, 1720, 2599
AhlI ACTAGT 1 cut(s) 803
AjiI CACGTC 1 cut(s) 840
AjnI CCWGG 5 cut(s) 365, 1763, 2056, 2502, 2732
AloI GAACNNNNNNTCC 2 cut(s) 365, 397
Alw21I GWGCWC 1 cut(s) 2163
Alw26I GTCTC 7 cut(s) 415, 790, 1200, 1571, 2599, 2650, 3020
AlwI GGATC 5 cut(s) 758, 1655, 1751, 1868, 2789
AlwNI CAGNNNCTG 1 cut(s) 1955
Aor13HI TCCGGA 2 cut(s) 108, 2578
AoxI GGCC 3 cut(s) 397, 2355, 3040
ApeKI GCWGC 7 cut(s) 193, 1357, 2280, 2848, 2864, 2867, 2975
ApoI RAATTY 8 cut(s) 119, 1152, 1388, 1810, 1827, 1905, 2801, 2935
ArsI GACNNNNNNTTYG 2 cut(s) 152, 184
Asp700I GAANNNNTTC 4 cut(s) 1746, 1773, 1830, 2336
AspS9I GGNCC 8 cut(s) 111, 397, 1396, 1483, 2356, 2500, 2576, 3041
AsuHPI GGTGA 3 cut(s) 890, 988, 1245
AvaII GGWCC 5 cut(s) 111, 1396, 1483, 2500, 2576
BaeGI GKGCMC 1 cut(s) 1343
BanII GRGCYC 1 cut(s) 2163
BauI CACGAG 1 cut(s) 1113
BbrPI CACGTG 1 cut(s) 845
BbsI GAAGAC 2 cut(s) 1718, 2419
Bbv12I GWGCWC 1 cut(s) 2163
BbvCI CCTCAGC 1 cut(s) 2076
BbvI GCAGC 7 cut(s) 205, 1344, 2267, 2860, 2876, 2879, 2962
BccI CCATC 8 cut(s) 217, 1003, 1177, 2058, 2216, 2220, 2492, 2695
BceAI ACGGC 1 cut(s) 665
BciT130I CCWGG 5 cut(s) 367, 1765, 2058, 2504, 2734
BciVI GTATCC 1 cut(s) 1175
BcoDI GTCTC 7 cut(s) 415, 790, 1200, 1571, 2599, 2650, 3020
BcuI ACTAGT 1 cut(s) 803
BfmI CTRYAG 1 cut(s) 2776
BfuAI ACCTGC 2 cut(s) 943, 1692
BfuI GTATCC 1 cut(s) 1175
BisI GCNGC 9 cut(s) 194, 1358, 2281, 2616, 2849, 2865, 2868, 2976, 3074
BlpI GCTNAGC 1 cut(s) 87
BlsI GCNGC 9 cut(s) 195, 1359, 2282, 2617, 2850, 2866, 2869, 2977, 3075
Bme1390I CCNGG 5 cut(s) 367, 1765, 2058, 2504, 2734
Bme18I GGWCC 5 cut(s) 111, 1396, 1483, 2500, 2576
BmgBI CACGTC 1 cut(s) 840
BmgT120I GGNCC 8 cut(s) 111, 397, 1396, 1483, 2356, 2500, 2576, 3041
BmiI GGNNCC 4 cut(s) 113, 273, 1397, 2358
BmrFI CCNGG 5 cut(s) 367, 1765, 2058, 2504, 2734
BmrI ACTGGG 1 cut(s) 321
BmsI GCATC 5 cut(s) 1174, 1480, 2011, 2506, 2673
BmuI ACTGGG 1 cut(s) 321
BpiI GAAGAC 2 cut(s) 1718, 2419
BplI GAGNNNNNCTC 2 cut(s) 2267, 2299
BpmI CTGGAG 1 cut(s) 2040
Bpu10I CCTNAGC 2 cut(s) 2076, 2342
Bpu1102I GCTNAGC 1 cut(s) 87
BpuEI CTTGAG 7 cut(s) 141, 772, 1178, 1230, 1355, 2672, 2817
Bsa29I ATCGAT 1 cut(s) 2527
BsaAI YACGTR 1 cut(s) 845
BsaHI GRCGYC 1 cut(s) 2243
BsaI GGTCTC 2 cut(s) 1571, 2650
BsaJI CCNNGG 5 cut(s) 366, 1053, 1665, 1764, 2437
BsaWI WCCGGW 2 cut(s) 108, 2578
Bsc4I CCNNNNNNNGG 6 cut(s) 1054, 1582, 2032, 2057, 2060, 2494
Bse1I ACTGG 2 cut(s) 316, 2003
Bse3DI GCAATG 3 cut(s) 631, 1689, 2087
BseAI TCCGGA 2 cut(s) 108, 2578
BseBI CCWGG 5 cut(s) 367, 1765, 2058, 2504, 2734
BseCI ATCGAT 1 cut(s) 2527
BseDI CCNNGG 5 cut(s) 366, 1053, 1665, 1764, 2437
BseLI CCNNNNNNNGG 6 cut(s) 1054, 1582, 2032, 2057, 2060, 2494
BseMI GCAATG 3 cut(s) 631, 1689, 2087
BseMII CTCAG 8 cut(s) 657, 873, 1254, 1572, 2090, 2333, 2784, 2864
BseNI ACTGG 2 cut(s) 316, 2003
BseRI GAGGAG 5 cut(s) 902, 929, 1474, 2043, 2153
BseSI GKGCMC 1 cut(s) 1343
BseXI GCAGC 7 cut(s) 205, 1344, 2267, 2860, 2876, 2879, 2962
BsgI GTGCAG 2 cut(s) 986, 2867
Bsh1236I CGCG 2 cut(s) 756, 3076
BshFI GGCC 3 cut(s) 399, 2357, 3042
BshVI ATCGAT 1 cut(s) 2527
BsiHKAI GWGCWC 1 cut(s) 2163
BsiSI CCGG 2 cut(s) 109, 2579
BslFI GGGAC 4 cut(s) 328, 823, 1409, 2419
BslI CCNNNNNNNGG 6 cut(s) 1054, 1582, 2032, 2057, 2060, 2494
BsmAI GTCTC 7 cut(s) 415, 790, 1200, 1571, 2599, 2650, 3020
BsmBI CGTCTC 1 cut(s) 3020
BsmFI GGGAC 4 cut(s) 328, 823, 1409, 2419
BsmI GAATGC 2 cut(s) 1111, 2978
BsnI GGCC 3 cut(s) 399, 2357, 3042
Bso31I GGTCTC 2 cut(s) 1571, 2650
Bsp1286I GDGCHC 2 cut(s) 1343, 2163
Bsp13I TCCGGA 2 cut(s) 108, 2578
Bsp143I GATC 7 cut(s) 535, 763, 1660, 1756, 1873, 2524, 2794
Bsp1720I GCTNAGC 1 cut(s) 87
BspACI CCGC 5 cut(s) 756, 2477, 2616, 3013, 3074
BspANI GGCC 3 cut(s) 399, 2357, 3042
BspCNI CTCAG 8 cut(s) 658, 872, 1255, 1573, 2089, 2334, 2783, 2865
BspDI ATCGAT 1 cut(s) 2527
BspEI TCCGGA 2 cut(s) 108, 2578
BspFNI CGCG 2 cut(s) 756, 3076
BspHI TCATGA 1 cut(s) 2419
BspLI GGNNCC 4 cut(s) 113, 273, 1397, 2358
BspMI ACCTGC 2 cut(s) 943, 1692
BspPI GGATC 5 cut(s) 758, 1655, 1751, 1868, 2789
BspQI GCTCTTC 1 cut(s) 2151
BspTNI GGTCTC 2 cut(s) 1571, 2650
BsrDI GCAATG 3 cut(s) 631, 1689, 2087
BsrI ACTGG 2 cut(s) 316, 2003
BssECI CCNNGG 5 cut(s) 366, 1053, 1665, 1764, 2437
BssMI GATC 7 cut(s) 535, 763, 1660, 1756, 1873, 2524, 2794
BssNAI GTATAC 2 cut(s) 1124, 1548
BssNI GRCGYC 1 cut(s) 2243
BssSI CACGAG 1 cut(s) 1113
BssT1I CCWWGG 2 cut(s) 1665, 2437
Bst1107I GTATAC 2 cut(s) 1124, 1548
Bst2BI CACGAG 1 cut(s) 1113
Bst2UI CCWGG 5 cut(s) 367, 1765, 2058, 2504, 2734
Bst4CI ACNGT 4 cut(s) 506, 1128, 2704, 2841
Bst6I CTCTTC 1 cut(s) 2151
BstACI GRCGYC 1 cut(s) 2243
BstBAI YACGTR 1 cut(s) 845
BstC8I GCNNGC 5 cut(s) 1045, 1049, 1242, 1920, 2620
BstDEI CTNAG 9 cut(s) 87, 666, 859, 1263, 1581, 2076, 2342, 2770, 2873
BstDSI CCRYGG 1 cut(s) 1053
BstENI CCTNNNNNAGG 1 cut(s) 2055
BstFNI CGCG 2 cut(s) 756, 3076
BstKTI GATC 7 cut(s) 538, 766, 1663, 1759, 1876, 2527, 2797
BstMAI GTCTC 7 cut(s) 415, 790, 1200, 1571, 2599, 2650, 3020
BstMBI GATC 7 cut(s) 535, 763, 1660, 1756, 1873, 2524, 2794
BstNI CCWGG 5 cut(s) 367, 1765, 2058, 2504, 2734
BstNSI RCATGY 2 cut(s) 752, 2622
BstSCI CCNGG 5 cut(s) 365, 1763, 2056, 2502, 2732
BstSFI CTRYAG 1 cut(s) 2776
BstSLI GKGCMC 1 cut(s) 1343
BstUI CGCG 2 cut(s) 756, 3076
BstV1I GCAGC 7 cut(s) 205, 1344, 2267, 2860, 2876, 2879, 2962
BstV2I GAAGAC 2 cut(s) 1718, 2419
BstXI CCANNNNNNTGG 3 cut(s) 337, 1060, 2064
BstZ17I GTATAC 2 cut(s) 1124, 1548
Bsu15I ATCGAT 1 cut(s) 2527
BsuI GTATCC 1 cut(s) 1175
BsuRI GGCC 3 cut(s) 399, 2357, 3042
BsuTUI ATCGAT 1 cut(s) 2527
BtgI CCRYGG 1 cut(s) 1053
BtgZI GCGATG 1 cut(s) 3068
BtrI CACGTC 1 cut(s) 840
BtsI GCAGTG 2 cut(s) 457, 1953
BtsIMutI CAGTG 9 cut(s) 457, 1221, 1578, 1953, 1996, 2151, 2646, 2709, 2870
BveI ACCTGC 2 cut(s) 943, 1692
Cac8I GCNNGC 5 cut(s) 1045, 1049, 1242, 1920, 2620
CaiI CAGNNNCTG 1 cut(s) 1955
CciI TCATGA 1 cut(s) 2419
Cfr13I GGNCC 8 cut(s) 111, 397, 1396, 1483, 2356, 2500, 2576, 3041
ClaI ATCGAT 1 cut(s) 2527
CseI GACGC 4 cut(s) 695, 1546, 2232, 3065
Csp6I GTAC 6 cut(s) 746, 752, 1495, 1837, 2087, 2697
CviQI GTAC 6 cut(s) 746, 752, 1495, 1837, 2087, 2697
DdeI CTNAG 9 cut(s) 87, 666, 859, 1263, 1581, 2076, 2342, 2770, 2873
DpnI GATC 7 cut(s) 537, 765, 1662, 1758, 1875, 2526, 2796
DpnII GATC 7 cut(s) 535, 763, 1660, 1756, 1873, 2524, 2794
DraI TTTAAA 1 cut(s) 460
DrdI GACNNNNNNGTC 1 cut(s) 429
DseDI GACNNNNNNGTC 1 cut(s) 429
Eam1104I CTCTTC 1 cut(s) 2151
EarI CTCTTC 1 cut(s) 2151
Ecl136II GAGCTC 1 cut(s) 2161
Eco130I CCWWGG 2 cut(s) 1665, 2437
Eco24I GRGCYC 1 cut(s) 2163
Eco31I GGTCTC 2 cut(s) 1571, 2650
Eco47I GGWCC 5 cut(s) 111, 1396, 1483, 2500, 2576
Eco53kI GAGCTC 1 cut(s) 2161
Eco57I CTGAAG 8 cut(s) 339, 680, 789, 1197, 1529, 2163, 2175, 2348
Eco72I CACGTG 1 cut(s) 845
EcoICRI GAGCTC 1 cut(s) 2161
EcoNI CCTNNNNNAGG 1 cut(s) 2055
EcoO109I RGGNCCY 4 cut(s) 1396, 2356, 2500, 3041
EcoRI GAATTC 2 cut(s) 1152, 1905
EcoRII CCWGG 5 cut(s) 365, 1763, 2056, 2502, 2732
EcoT14I CCWWGG 2 cut(s) 1665, 2437
EcoT38I GRGCYC 1 cut(s) 2163
ErhI CCWWGG 2 cut(s) 1665, 2437
Esp3I CGTCTC 1 cut(s) 3020
FalI AAGNNNNNCTT 2 cut(s) 890, 922
FaqI GGGAC 4 cut(s) 328, 823, 1409, 2419
FauI CCCGC 1 cut(s) 749
FblI GTMKAC 2 cut(s) 1123, 1547
Fnu4HI GCNGC 9 cut(s) 194, 1358, 2281, 2616, 2849, 2865, 2868, 2976, 3074
FriOI GRGCYC 1 cut(s) 2163
Fsp4HI GCNGC 9 cut(s) 194, 1358, 2281, 2616, 2849, 2865, 2868, 2976, 3074
GluI GCNGC 9 cut(s) 194, 1358, 2281, 2616, 2849, 2865, 2868, 2976, 3074
GsuI CTGGAG 1 cut(s) 2040
HaeIII GGCC 3 cut(s) 399, 2357, 3042
HapII CCGG 2 cut(s) 109, 2579
HgaI GACGC 4 cut(s) 695, 1546, 2232, 3065
Hin1I GRCGYC 1 cut(s) 2243
HindIII AAGCTT 3 cut(s) 69, 89, 1248
HpaII CCGG 2 cut(s) 109, 2579
HphI GGTGA 3 cut(s) 890, 988, 1245
Hpy166II GTNNAC 4 cut(s) 482, 1124, 1548, 2087
Hpy8I GTNNAC 4 cut(s) 482, 1124, 1548, 2087
Hpy99I CGWCG 1 cut(s) 1562
HpyCH4III ACNGT 4 cut(s) 506, 1128, 2704, 2841
HpyCH4IV ACGT 3 cut(s) 839, 844, 1137
HpyF3I CTNAG 9 cut(s) 87, 666, 859, 1263, 1581, 2076, 2342, 2770, 2873
HpySE526I ACGT 3 cut(s) 839, 844, 1137
Hsp92I GRCGYC 1 cut(s) 2243
Kpn2I TCCGGA 2 cut(s) 108, 2578
Kzo9I GATC 7 cut(s) 535, 763, 1660, 1756, 1873, 2524, 2794
LguI GCTCTTC 1 cut(s) 2151
LmnI GCTCC 3 cut(s) 271, 2166, 2288
Lsp1109I GCAGC 7 cut(s) 205, 1344, 2267, 2860, 2876, 2879, 2962
LweI GCATC 5 cut(s) 1174, 1480, 2011, 2506, 2673
MaeII ACGT 3 cut(s) 839, 844, 1137
MaeIII GTNAC 7 cut(s) 175, 696, 840, 1063, 2263, 2728, 2806
MalI GATC 7 cut(s) 537, 765, 1662, 1758, 1875, 2526, 2796
MboI GATC 7 cut(s) 535, 763, 1660, 1756, 1873, 2524, 2794
MfeI CAATTG 2 cut(s) 692, 701
MhlI GDGCHC 2 cut(s) 1343, 2163
MlyI GAGTC 9 cut(s) 203, 439, 1292, 1386, 1471, 1473, 2260, 2441, 2468
MmeI TCCRAC 2 cut(s) 337, 1499
MroI TCCGGA 2 cut(s) 108, 2578
MroXI GAANNNNTTC 4 cut(s) 1746, 1773, 1830, 2336
MslI CAYNNNNRTG 3 cut(s) 1058, 2467, 3053
MspI CCGG 2 cut(s) 109, 2579
MspR9I CCNGG 5 cut(s) 367, 1765, 2058, 2504, 2734
MunI CAATTG 2 cut(s) 692, 701
Mva1269I GAATGC 2 cut(s) 1111, 2978
MvaI CCWGG 5 cut(s) 367, 1765, 2058, 2504, 2734
MvnI CGCG 2 cut(s) 756, 3076
NdeII GATC 7 cut(s) 535, 763, 1660, 1756, 1873, 2524, 2794
NlaIV GGNNCC 4 cut(s) 113, 273, 1397, 2358
NmuCI GTSAC 4 cut(s) 696, 840, 1063, 2263
NspI RCATGY 2 cut(s) 752, 2622
PaeI GCATGC 1 cut(s) 2622
PagI TCATGA 1 cut(s) 2419
PciI ACATGT 1 cut(s) 748
PciSI GCTCTTC 1 cut(s) 2151
PctI GAATGC 2 cut(s) 1111, 2978
PdmI GAANNNNTTC 4 cut(s) 1746, 1773, 1830, 2336
PfeI GAWTC 7 cut(s) 380, 519, 715, 1780, 1843, 2041, 3035
PkrI GCNGC 9 cut(s) 195, 1359, 2282, 2617, 2850, 2866, 2869, 2977, 3075
PleI GAGTC 9 cut(s) 203, 438, 1291, 1385, 1471, 1472, 2260, 2440, 2467
PmaCI CACGTG 1 cut(s) 845
PmlI CACGTG 1 cut(s) 845
PpsI GAGTC 9 cut(s) 203, 438, 1291, 1385, 1471, 1472, 2260, 2440, 2467
Ppu21I YACGTR 1 cut(s) 845
PpuMI RGGWCCY 2 cut(s) 1396, 2500
PscI ACATGT 1 cut(s) 748
PsiI TTATAA 2 cut(s) 1728, 1964
Psp124BI GAGCTC 1 cut(s) 2163
Psp5II RGGWCCY 2 cut(s) 1396, 2500
Psp6I CCWGG 5 cut(s) 365, 1763, 2056, 2502, 2732
PspCI CACGTG 1 cut(s) 845
PspGI CCWGG 5 cut(s) 365, 1763, 2056, 2502, 2732
PspN4I GGNNCC 4 cut(s) 113, 273, 1397, 2358
PspPI GGNCC 8 cut(s) 111, 397, 1396, 1483, 2356, 2500, 2576, 3041
PspPPI RGGWCCY 2 cut(s) 1396, 2500
PstNI CAGNNNCTG 1 cut(s) 1955
RsaI GTAC 6 cut(s) 747, 753, 1496, 1838, 2088, 2698
RsaNI GTAC 6 cut(s) 746, 752, 1495, 1837, 2087, 2697
RseI CAYNNNNRTG 3 cut(s) 1058, 2467, 3053
SacI GAGCTC 1 cut(s) 2163
SapI GCTCTTC 1 cut(s) 2151
SatI GCNGC 9 cut(s) 194, 1358, 2281, 2616, 2849, 2865, 2868, 2976, 3074
Sau3AI GATC 7 cut(s) 535, 763, 1660, 1756, 1873, 2524, 2794
Sau96I GGNCC 8 cut(s) 111, 397, 1396, 1483, 2356, 2500, 2576, 3041
SchI GAGTC 9 cut(s) 203, 439, 1292, 1386, 1471, 1473, 2260, 2441, 2468
ScrFI CCNGG 5 cut(s) 367, 1765, 2058, 2504, 2734
SduI GDGCHC 2 cut(s) 1343, 2163
SfaNI GCATC 5 cut(s) 1174, 1480, 2011, 2506, 2673
SfcI CTRYAG 1 cut(s) 2776
SinI GGWCC 5 cut(s) 111, 1396, 1483, 2500, 2576
SmiMI CAYNNNNRTG 3 cut(s) 1058, 2467, 3053
SmlI CTYRAG 7 cut(s) 156, 787, 1157, 1245, 1334, 2651, 2832
SmoI CTYRAG 7 cut(s) 156, 787, 1157, 1245, 1334, 2651, 2832
SpeI ACTAGT 1 cut(s) 803
SphI GCATGC 1 cut(s) 2622
SsiI CCGC 5 cut(s) 756, 2477, 2616, 3013, 3074
SspI AATATT 1 cut(s) 1235
SstI GAGCTC 1 cut(s) 2163
StyD4I CCNGG 5 cut(s) 365, 1763, 2056, 2502, 2732
StyI CCWWGG 2 cut(s) 1665, 2437
TaaI ACNGT 4 cut(s) 506, 1128, 2704, 2841
TaiI ACGT 3 cut(s) 842, 847, 1140
TaqI TCGA 5 cut(s) 1375, 1560, 2527, 2677, 2904
TatI WGTACW 5 cut(s) 745, 1494, 1836, 2086, 2696
TauI GCSGC 2 cut(s) 2618, 3076
TfiI GAWTC 7 cut(s) 380, 519, 715, 1780, 1843, 2041, 3035
TscAI CASTG 9 cut(s) 457, 1221, 1585, 1960, 2003, 2158, 2646, 2709, 2877
TseFI GTSAC 4 cut(s) 696, 840, 1063, 2263
TseI GCWGC 7 cut(s) 193, 1357, 2280, 2848, 2864, 2867, 2975
Tsp45I GTSAC 4 cut(s) 696, 840, 1063, 2263
TspGWI ACGGA 3 cut(s) 1070, 1833, 3044
TspRI CASTG 9 cut(s) 457, 1221, 1585, 1960, 2003, 2158, 2646, 2709, 2877
VpaK11BI GGWCC 5 cut(s) 111, 1396, 1483, 2500, 2576
XagI CCTNNNNNAGG 1 cut(s) 2055
XapI RAATTY 8 cut(s) 119, 1152, 1388, 1810, 1827, 1905, 2801, 2935
XbaI TCTAGA 1 cut(s) 1516
XceI RCATGY 2 cut(s) 752, 2622
XcmI CCANNNNNNNNNTGG 6 cut(s) 373, 391, 575, 1006, 2367, 2491
XmiI GTMKAC 2 cut(s) 1123, 1547
XmnI GAANNNNTTC 4 cut(s) 1746, 1773, 1830, 2336
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.