Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0002858

Physical Location & Seq

Genomic Coordinates Reverse (-)

34160093 .. 34166793

Gene Structure 6701 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000018704

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2478 bp

ATGCTGTACCCAAAAGACGCGAACTTTTTGGGGGAACTCATCCTGAATGCAGAAGAAGATGCAGTGCGGCCAGTGCCAGAGCTGAAATTTGTGTTGACCAAGAAAGACATAACTGAGACTGGAGCACCAGCTACTCTGTTGGTTTTCAATAATGAAGTTGGCTTTTCCAGGGAGAACATAGCATCTATTTGCGGCATTTTCCATTCTACAAAGAAGGGGAGGAGACAGCAGAGGCTTATTGAAGAGAATGGAAGTGGATTCAAAAGTGTATTTCTCGTGAGTTCACAGCCTTACATTTTCAGCAACGGCTATCGTGTCAGATTCCAGGAAGTAACAGATCAAGATTGTGGTATTGGGTATATAGTTCCCCAGTGGGTGAGCAGACATCCTTCTCTTTCTAGAATATATGATGTATATGGGCTCAGTAATGCCTACCCTGCAACCACAATTATCCTTCCTCTAAAGCCTGAGATGATTGAAGCCGTGAGAGAGCAATTGTCACAGTTGTGCCCAGAGATTATCCTGTTCTTATCGAAATTAAAGCGACTATATGTATGTAGTTATGATCCTGAAGTAGCTGATAGAGTCTCAAGCTTTCTTATATCTAGTATGACTAAACACGAGGTTTCTTCACGTGTGGTTCAACTTTCAAAGAAAAACTTGGATGATACTGAGGAATCGTGCGATTATTACTTGTGGGAAATGACATTGCAGATGGATGTGCAGAGCTGGGTGATTACCATTGCTTTCCCATCTGGAGAAAGGATGACAACGGCAACTTCTTCTGTTGGTATATTCGCTTTCCTTCCCACGACAATGGTCACAGACTTCCTGTTCCTAATTCAGGCTGACTTCATTCTTAATTCGTCAAGAGATTCTATAATGTTGGACAATGTATGGAAATTGGGGATTCTCAACTGTATCCCATCAGCATTTGTGAATGCCTTTCAGTCTCACTCCTTGTGTTATCCAGTGGGTAAGAGATTTGAATTTTTACCTGCTCAAGCTCCATCAATTCCCAAGTTTAAAGACTTAAGAGAGTCCATTAGAGCTGAATTGCAGAGTCTAGTGATAGTGCCTTGTGAAATTATTGAGGGTATGTCTTCCTCTGCGAGGCCTCAAGAGGCAGTTCGTGTCCTTCCGAACTTCAGGGACCTAGTGGGTGGATTTAAAATAGAAGGTTATGCTTTGAGCAGTTTATCAAAATATTTAATGAGCAGGGTCTTGCATCCATCTGTGGACCTTGAAAAATACAATGCAGTTCTGGAGTTTCTAGGTGTGGAATTTGCTAACAACCATTGGTATACAGAATGCATCCAAAGGCTCTGCAGCTCAATTCATGAAAAGGTTACTGGAGCTGGCATTATTTCATTGCTAAAGTGCATCAAGAATCTGACGTCAAGCTCTCCTGATGATCCCTTACTGAGGGACTTAATCAACAGCATTAAGAAACTTCTGTTTGATCTAGCCTGGGAAAGTATTCTGGATCGGACAAAGATACCAACCATTGATGAGAACTTTTATGGAACTGATATTCTTGTATACAAGAAGCAGTTGAGATATATCGGTGTGAAGGTAGATCCTTTGACTGTTTGTTCTTTTCTTTCTGGGATTCTTGCTAAGCTGGTAAAGCCAGACGTTTATTTTGAAGAAACTTTCATAGAAACGATTTACACATTCCTGAACAAGTTCCAGTGGCGTCCAGAAGTGCCAGATGGAACCACACCTGTGTGGAGCTCAGCCCAACGCCCCCCAGTTGCAGAGAATCCTTCCTTCGATCATTACATGGATCTCTGGAACAAATGGAATGGGAAGGTCCAAGTGACTCTGGAAGAGTACTGCTGCTCCTTCTGGAAGTATGTTGTAGACAACTGGAATCCAGAAGTTGAAGAGGCTTTTAAAAGTTTGACAAAACTACCTGCCACAAAGTCGATGTCTGAGAAAATTACTATGCCATTGGAAGATAGAAAAGATACTGCATCCTCAATTGCTAGACTTAAGAAGCAGTCTGAGCAGTTGTTCACTGATAGTTCAGGGTACAACAATGGAAAATCTGATCTAAAATTTGTTGCAGCTTTCGCTGACGAACTTGCTCAAGGACTGTTGGTGCAAGCAAAAGCAAGAGCAACATCGAGCAAGATCATCCAAATTGGGTTTTTGTCTGGTTTTAGTGAGAATGAAGTGGATGTCTTGCTAATGGGAGAAAATTTAGCGTTATCCACCACCGGAGAGCTGAAAGATGAGGAGGCATTCTTGAAATCACAGGTCGGAGCGTTCTTCGCCGCAGACGGTGACCGGACACTTGACCGTCTGCACATTCCACTCCTCGACGAGGATCGTCCTCACTTGCTCACACAGCGTCTTCACCTCCGCCTCCTTCAGAGGCTTACACTGCATCAGGTGGTTGATCTGACGGTCCAGATCGGCGTTCGGCGGCATCGTGGTGGAGATTTTAGCTCTCGATTGGTGGTGCGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

826

Amino Acids

93.4

Weight (kDa)

5.79

Isoelectric Point (pI)

43.15

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002858)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g13480
pyrus_communis	pycom08g06270
rosa_chinensis	RchiOBHm_Chr2g0086071 RchiOBHm_Chr2g0086081 RchiOBHm_Chr2g0086101 RchiOBHm_Chr2g0122661
rosa_laevigata	RLG00000015740 RLG00000015743 RLG00000018698 RLG00000018704
rosa_multiflora	Rmu_sc0003133.1_g000025 Rmu_sc0006012.1_g000008 Rmu_sc0017765.1_g000003 Rmu_sc0020050.1_g000004 Rmu_ssc0000041.1_g000003 Rmu_ssc0000355.1_g000017
rosa_roxburghii	Rroxscaffold_2G00106820 Rroxscaffold_2G00121390 Rroxscaffold_2G00154810 Rroxscaffold_6G00408820
rosa_rugosa	Rorug01G0465700 Rorug01G0465700 Rorug02G0241200
rosa_samantha	Rh2AG014900 Rh2AG015300 Rh2AG298900 Rh2BG015400 Rh2BG307800 Rh2CG015900 Rh2CG016300 Rh2CG285900 Rh2DG017200 Rh2DG017400 Rh4BG170400 Rh6CG207900 Rh6DG198200
rosa_wichuraiana	Rw2G001310 Rw2G001330 Rw2G023820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1400
Acc36I	ACCTGC	2 cut(s)	1006, 1927
AccI	GTMKAC	3 cut(s)	1304, 1542, 1866
AccII	CGCG	1 cut(s)	20
AciI	CCGC	6 cut(s)	67, 192, 2283, 2371, 2434, 2473
AclWI	GGATC	6 cut(s)	560, 1409, 1494, 1574, 1797, 2343
AcoI	YGGCCR	1 cut(s)	68
AcsI	RAATTY	5 cut(s)	86, 989, 1283, 2063, 2206
AcuI	CTGAAG	3 cut(s)	591, 1132, 2363
AcvI	CACGTG	1 cut(s)	635
AcyI	GRCGYC	2 cut(s)	1397, 1699
AfaI	GTAC	3 cut(s)	8, 1838, 2039
AfiI	CCNNNNNNNGG	4 cut(s)	844, 1113, 1425, 2332
AflII	CTTAAG	2 cut(s)	1033, 1997
AflIII	ACRYGT	1 cut(s)	634
AjnI	CCWGG	3 cut(s)	167, 324, 1469
AleI	CACNNNNGTG	3 cut(s)	505, 1727, 1729
Alw21I	GWGCWC	2 cut(s)	127, 1739
Alw26I	GTCTC	4 cut(s)	110, 217, 592, 957
AlwI	GGATC	6 cut(s)	560, 1409, 1494, 1574, 1797, 2343
AoxI	GGCC	2 cut(s)	68, 1115
ApeKI	GCWGC	3 cut(s)	1329, 1842, 2072
ApoI	RAATTY	5 cut(s)	86, 989, 1283, 2063, 2206
ArsI	GACNNNNNNTTYG	4 cut(s)	1628, 1660, 1919, 1951
Asp700I	GAANNNNTTC	2 cut(s)	1479, 1688
AspS9I	GGNCC	4 cut(s)	1153, 1240, 1816, 2416
AsuHPI	GGTGA	4 cut(s)	388, 745, 2303, 2357
AvaII	GGWCC	4 cut(s)	1153, 1240, 1816, 2416
BaeGI	GKGCMC	1 cut(s)	512
BanII	GRGCYC	2 cut(s)	423, 1739
BauI	CACGAG	2 cut(s)	275, 620
BbrPI	CACGTG	1 cut(s)	635
BbsI	GAAGAC	2 cut(s)	1095, 2354
Bbv12I	GWGCWC	2 cut(s)	127, 1739
BbvI	GCAGC	3 cut(s)	1341, 1829, 2084
BccI	CCATC	6 cut(s)	709, 760, 934, 1018, 1240, 1709
BceAI	ACGGC	3 cut(s)	322, 467, 789
BciT130I	CCWGG	3 cut(s)	169, 326, 1471
BciVI	GTATCC	1 cut(s)	932
BcoDI	GTCTC	4 cut(s)	110, 217, 592, 957
BfaI	CTAG	7 cut(s)	399, 606, 1067, 1157, 1274, 1466, 1992
BfmI	CTRYAG	1 cut(s)	1327
BfrI	CTTAAG	2 cut(s)	1033, 1997
BfuAI	ACCTGC	2 cut(s)	1006, 1927
BfuI	GTATCC	1 cut(s)	932
BisI	GCNGC	7 cut(s)	68, 193, 1330, 1843, 2073, 2283, 2435
BlpI	GCTNAGC	2 cut(s)	1620, 1738
BlsI	GCNGC	7 cut(s)	69, 194, 1331, 1844, 2074, 2284, 2436
BmcAI	AGTACT	1 cut(s)	1838
Bme1390I	CCNGG	3 cut(s)	169, 326, 1471
Bme18I	GGWCC	4 cut(s)	1153, 1240, 1816, 2416
BmgT120I	GGNCC	4 cut(s)	1153, 1240, 1816, 2416
BmiI	GGNNCC	2 cut(s)	1154, 1720
BmrFI	CCNGG	3 cut(s)	169, 326, 1471
BmrI	ACTGGG	2 cut(s)	364, 1748
BmsI	GCATC	8 cut(s)	49, 191, 1237, 1323, 1392, 1988, 2404, 2446
BmuI	ACTGGG	2 cut(s)	364, 1748
BoxI	GACNNNNGTC	1 cut(s)	818
BpiI	GAAGAC	2 cut(s)	1095, 2354
BpmI	CTGGAG	4 cut(s)	141, 777, 1286, 1374
Bpu1102I	GCTNAGC	2 cut(s)	1620, 1738
BpuEI	CTTGAG	4 cut(s)	574, 987, 1104, 2079
BsaAI	YACGTR	1 cut(s)	635
BsaHI	GRCGYC	2 cut(s)	1397, 1699
BsaJI	CCNNGG	2 cut(s)	168, 1470
BsaWI	WCCGGW	2 cut(s)	2225, 2295
BsaXI	ACNNNNNCTCC	2 cut(s)	1829, 1859
Bsc4I	CCNNNNNNNGG	4 cut(s)	844, 1113, 1425, 2332
Bse1I	ACTGG	8 cut(s)	71, 124, 370, 971, 1357, 1693, 1754, 1877
Bse3DI	GCAATG	3 cut(s)	707, 741, 1370
BseBI	CCWGG	3 cut(s)	169, 326, 1471
BseDI	CCNNGG	2 cut(s)	168, 1470
BseLI	CCNNNNNNNGG	4 cut(s)	844, 1113, 1425, 2332
BseMI	GCAATG	3 cut(s)	707, 741, 1370
BseMII	CTCAG	8 cut(s)	105, 436, 459, 663, 1415, 1752, 1929, 2001
BseNI	ACTGG	8 cut(s)	71, 124, 370, 971, 1357, 1693, 1754, 1877
BseRI	GAGGAG	3 cut(s)	235, 2258, 2315
BseSI	GKGCMC	1 cut(s)	512
BseXI	GCAGC	3 cut(s)	1341, 1829, 2084
BseYI	CCCAGC	1 cut(s)	729
BsgI	GTGCAG	2 cut(s)	743, 2297
Bsh1236I	CGCG	1 cut(s)	20
BshFI	GGCC	2 cut(s)	70, 1117
BsiHKAI	GWGCWC	2 cut(s)	127, 1739
BsiSI	CCGG	2 cut(s)	2226, 2296
BslFI	GGGAC	2 cut(s)	1166, 1442
BslI	CCNNNNNNNGG	4 cut(s)	844, 1113, 1425, 2332
BsmAI	GTCTC	4 cut(s)	110, 217, 592, 957
BsmFI	GGGAC	2 cut(s)	1166, 1442
BsmI	GAATGC	4 cut(s)	52, 946, 1316, 2249
BsnI	GGCC	2 cut(s)	70, 1117
Bsp1286I	GDGCHC	4 cut(s)	127, 423, 512, 1739
Bsp1720I	GCTNAGC	2 cut(s)	1620, 1738
BspACI	CCGC	6 cut(s)	67, 192, 2283, 2371, 2434, 2473
BspANI	GGCC	2 cut(s)	70, 1117
BspCNI	CTCAG	8 cut(s)	106, 435, 460, 664, 1416, 1751, 1930, 2002
BspFNI	CGCG	1 cut(s)	20
BspHI	TCATGA	1 cut(s)	1339
BspLI	GGNNCC	2 cut(s)	1154, 1720
BspMAI	CTGCAG	1 cut(s)	1331
BspMI	ACCTGC	2 cut(s)	1006, 1927
BspPI	GGATC	6 cut(s)	560, 1409, 1494, 1574, 1797, 2343
BspTI	CTTAAG	2 cut(s)	1033, 1997
BsrDI	GCAATG	3 cut(s)	707, 741, 1370
BsrI	ACTGG	8 cut(s)	71, 124, 370, 971, 1357, 1693, 1754, 1877
BssECI	CCNNGG	2 cut(s)	168, 1470
BssNAI	GTATAC	2 cut(s)	1305, 1543
BssNI	GRCGYC	2 cut(s)	1397, 1699
BssSI	CACGAG	2 cut(s)	275, 620
Bst1107I	GTATAC	2 cut(s)	1305, 1543
Bst2BI	CACGAG	2 cut(s)	275, 620
Bst2UI	CCWGG	3 cut(s)	169, 326, 1471
Bst4CI	ACNGT	7 cut(s)	504, 920, 1591, 2103, 2291, 2309, 2416
Bst6I	CTCTTC	3 cut(s)	237, 1827, 1884
BstACI	GRCGYC	2 cut(s)	1397, 1699
BstAFI	CTTAAG	2 cut(s)	1033, 1997
BstBAI	YACGTR	1 cut(s)	635
BstC8I	GCNNGC	2 cut(s)	1360, 2112
BstDEI	CTNAG	9 cut(s)	114, 422, 468, 672, 1424, 1620, 1738, 1938, 2010
BstEII	GGTNACC	1 cut(s)	2291
BstENI	CCTNNNNNAGG	4 cut(s)	842, 1111, 1423, 2330
BstFNI	CGCG	1 cut(s)	20
BstMAI	GTCTC	4 cut(s)	110, 217, 592, 957
BstMWI	GCNNNNNNNGC	8 cut(s)	73, 437, 1630, 2011, 2078, 2279, 2356, 2392
BstNI	CCWGG	3 cut(s)	169, 326, 1471
BstPAI	GACNNNNGTC	1 cut(s)	818
BstPI	GGTNACC	1 cut(s)	2291
BstSCI	CCNGG	3 cut(s)	167, 324, 1469
BstSFI	CTRYAG	1 cut(s)	1327
BstSLI	GKGCMC	1 cut(s)	512
BstUI	CGCG	1 cut(s)	20
BstV1I	GCAGC	3 cut(s)	1341, 1829, 2084
BstV2I	GAAGAC	2 cut(s)	1095, 2354
BstX2I	RGATCY	2 cut(s)	1579, 1789
BstXI	CCANNNNNNTGG	1 cut(s)	817
BstYI	RGATCY	2 cut(s)	1579, 1789
BstZ17I	GTATAC	2 cut(s)	1305, 1543
BsuI	GTATCC	1 cut(s)	932
BsuRI	GGCC	2 cut(s)	70, 1117
BtsI	GCAGTG	2 cut(s)	69, 2390
BtsIMutI	CAGTG	7 cut(s)	69, 78, 377, 978, 1700, 2022, 2390
BveI	ACCTGC	2 cut(s)	1006, 1927
Cac8I	GCNNGC	2 cut(s)	1360, 2112
CciI	TCATGA	1 cut(s)	1339
Cfr13I	GGNCC	4 cut(s)	1153, 1240, 1816, 2416
CseI	GACGC	3 cut(s)	26, 1688, 2348
Csp6I	GTAC	3 cut(s)	7, 1837, 2038
CviAII	CATG	2 cut(s)	1340, 1786
CviQI	GTAC	3 cut(s)	7, 1837, 2038
DdeI	CTNAG	9 cut(s)	114, 422, 468, 672, 1424, 1620, 1738, 1938, 2010
DraI	TTTAAA	3 cut(s)	1027, 1171, 1900
EaeI	YGGCCR	1 cut(s)	68
Eam1104I	CTCTTC	3 cut(s)	237, 1827, 1884
EarI	CTCTTC	3 cut(s)	237, 1827, 1884
EciI	GGCGGA	1 cut(s)	2360
Ecl136II	GAGCTC	1 cut(s)	1737
Eco147I	AGGCCT	1 cut(s)	1117
Eco24I	GRGCYC	2 cut(s)	423, 1739
Eco47I	GGWCC	4 cut(s)	1153, 1240, 1816, 2416
Eco53kI	GAGCTC	1 cut(s)	1737
Eco57I	CTGAAG	3 cut(s)	591, 1132, 2363
Eco72I	CACGTG	1 cut(s)	635
Eco91I	GGTNACC	1 cut(s)	2291
EcoICRI	GAGCTC	1 cut(s)	1737
EcoNI	CCTNNNNNAGG	4 cut(s)	842, 1111, 1423, 2330
EcoO109I	RGGNCCY	1 cut(s)	1153
EcoO65I	GGTNACC	1 cut(s)	2291
EcoRII	CCWGG	3 cut(s)	167, 324, 1469
EcoT22I	ATGCAT	1 cut(s)	1316
EcoT38I	GRGCYC	2 cut(s)	423, 1739
FaeI	CATG	2 cut(s)	1343, 1789
FalI	AAGNNNNNCTT	2 cut(s)	644, 676
FaqI	GGGAC	2 cut(s)	1166, 1442
FatI	CATG	2 cut(s)	1339, 1785
FblI	GTMKAC	3 cut(s)	1304, 1542, 1866
Fnu4HI	GCNGC	7 cut(s)	68, 193, 1330, 1843, 2073, 2283, 2435
FriOI	GRGCYC	2 cut(s)	423, 1739
Fsp4HI	GCNGC	7 cut(s)	68, 193, 1330, 1843, 2073, 2283, 2435
FspBI	CTAG	7 cut(s)	399, 606, 1067, 1157, 1274, 1466, 1992
GluI	GCNGC	7 cut(s)	68, 193, 1330, 1843, 2073, 2283, 2435
GsaI	CCCAGC	1 cut(s)	733
GsuI	CTGGAG	4 cut(s)	141, 777, 1286, 1374
HaeIII	GGCC	2 cut(s)	70, 1117
HapII	CCGG	2 cut(s)	2226, 2296
HgaI	GACGC	3 cut(s)	26, 1688, 2348
Hin1I	GRCGYC	2 cut(s)	1397, 1699
Hin1II	CATG	2 cut(s)	1343, 1789
HincII	GTYRAC	1 cut(s)	96
HindII	GTYRAC	1 cut(s)	96
HindIII	AAGCTT	1 cut(s)	592
HpaII	CCGG	2 cut(s)	2226, 2296
HphI	GGTGA	4 cut(s)	388, 745, 2303, 2357
Hpy166II	GTNNAC	7 cut(s)	96, 284, 1240, 1305, 1543, 1867, 2022
Hpy8I	GTNNAC	7 cut(s)	96, 284, 1240, 1305, 1543, 1867, 2022
Hpy99I	CGWCG	1 cut(s)	2333
HpyCH4III	ACNGT	7 cut(s)	504, 920, 1591, 2103, 2291, 2309, 2416
HpyCH4IV	ACGT	3 cut(s)	634, 1397, 1638
HpyF10VI	GCNNNNNNNGC	8 cut(s)	73, 437, 1630, 2011, 2078, 2279, 2356, 2392
HpyF3I	CTNAG	9 cut(s)	114, 422, 468, 672, 1424, 1620, 1738, 1938, 2010
HpySE526I	ACGT	3 cut(s)	634, 1397, 1638
Hsp92I	GRCGYC	2 cut(s)	1397, 1699
Hsp92II	CATG	2 cut(s)	1343, 1789
LmnI	GCTCC	6 cut(s)	122, 1012, 1355, 1734, 1850, 2270
Lsp1109I	GCAGC	3 cut(s)	1341, 1829, 2084
LweI	GCATC	8 cut(s)	49, 191, 1237, 1323, 1392, 1988, 2404, 2446
MaeI	CTAG	7 cut(s)	399, 606, 1067, 1157, 1274, 1466, 1992
MaeII	ACGT	3 cut(s)	634, 1397, 1638
MaeIII	GTNAC	6 cut(s)	331, 498, 820, 1348, 1822, 2291
MfeI	CAATTG	2 cut(s)	494, 1986
MflI	RGATCY	2 cut(s)	1579, 1789
MhlI	GDGCHC	4 cut(s)	127, 423, 512, 1739
MlyI	GAGTC	4 cut(s)	594, 1049, 1072, 1819
MmeI	TCCRAC	2 cut(s)	867, 2248
Mph1103I	ATGCAT	1 cut(s)	1316
MroXI	GAANNNNTTC	2 cut(s)	1479, 1688
MslI	CAYNNNNRTG	5 cut(s)	505, 815, 1727, 1729, 2442
MspCI	CTTAAG	2 cut(s)	1033, 1997
MspI	CCGG	2 cut(s)	2226, 2296
MspR9I	CCNGG	3 cut(s)	169, 326, 1471
MunI	CAATTG	2 cut(s)	494, 1986
Mva1269I	GAATGC	4 cut(s)	52, 946, 1316, 2249
MvaI	CCWGG	3 cut(s)	169, 326, 1471
MvnI	CGCG	1 cut(s)	20
MwoI	GCNNNNNNNGC	8 cut(s)	73, 437, 1630, 2011, 2078, 2279, 2356, 2392
NlaIII	CATG	2 cut(s)	1343, 1789
NlaIV	GGNNCC	2 cut(s)	1154, 1720
NmuCI	GTSAC	4 cut(s)	498, 820, 1822, 2291
NsiI	ATGCAT	1 cut(s)	1316
OliI	CACNNNNGTG	3 cut(s)	505, 1727, 1729
PagI	TCATGA	1 cut(s)	1339
PceI	AGGCCT	1 cut(s)	1117
PcsI	WCGNNNNNNNCGW	1 cut(s)	2437
PctI	GAATGC	4 cut(s)	52, 946, 1316, 2249
PdmI	GAANNNNTTC	2 cut(s)	1479, 1688
PfeI	GAWTC	9 cut(s)	258, 321, 677, 875, 910, 1390, 1612, 1765, 1876
PfoI	TCCNGGA	1 cut(s)	324
PkrI	GCNGC	7 cut(s)	69, 194, 1331, 1844, 2074, 2284, 2436
PleI	GAGTC	4 cut(s)	593, 1048, 1071, 1819
PmaCI	CACGTG	1 cut(s)	635
PmlI	CACGTG	1 cut(s)	635
PpsI	GAGTC	4 cut(s)	593, 1048, 1071, 1819
Ppu21I	YACGTR	1 cut(s)	635
PpuMI	RGGWCCY	1 cut(s)	1153
PshAI	GACNNNNGTC	1 cut(s)	818
Psp124BI	GAGCTC	1 cut(s)	1739
Psp5II	RGGWCCY	1 cut(s)	1153
Psp6I	CCWGG	3 cut(s)	167, 324, 1469
PspCI	CACGTG	1 cut(s)	635
PspEI	GGTNACC	1 cut(s)	2291
PspFI	CCCAGC	1 cut(s)	729
PspGI	CCWGG	3 cut(s)	167, 324, 1469
PspN4I	GGNNCC	2 cut(s)	1154, 1720
PspPI	GGNCC	4 cut(s)	1153, 1240, 1816, 2416
PspPPI	RGGWCCY	1 cut(s)	1153
PstI	CTGCAG	1 cut(s)	1331
PsuI	RGATCY	2 cut(s)	1579, 1789
RsaI	GTAC	3 cut(s)	8, 1838, 2039
RsaNI	GTAC	3 cut(s)	7, 1837, 2038
RseI	CAYNNNNRTG	5 cut(s)	505, 815, 1727, 1729, 2442
SacI	GAGCTC	1 cut(s)	1739
SatI	GCNGC	7 cut(s)	68, 193, 1330, 1843, 2073, 2283, 2435
Sau96I	GGNCC	4 cut(s)	1153, 1240, 1816, 2416
ScaI	AGTACT	1 cut(s)	1838
SchI	GAGTC	4 cut(s)	594, 1049, 1072, 1819
ScrFI	CCNGG	3 cut(s)	169, 326, 1471
SduI	GDGCHC	4 cut(s)	127, 423, 512, 1739
SfaNI	GCATC	8 cut(s)	49, 191, 1237, 1323, 1392, 1988, 2404, 2446
SfcI	CTRYAG	1 cut(s)	1327
SinI	GGWCC	4 cut(s)	1153, 1240, 1816, 2416
SmiMI	CAYNNNNRTG	5 cut(s)	505, 815, 1727, 1729, 2442
SmlI	CTYRAG	6 cut(s)	589, 1002, 1033, 1119, 1997, 2094
SmoI	CTYRAG	6 cut(s)	589, 1002, 1033, 1119, 1997, 2094
SseBI	AGGCCT	1 cut(s)	1117
SsiI	CCGC	6 cut(s)	67, 192, 2283, 2371, 2434, 2473
SspI	AATATT	1 cut(s)	1208
SspMI	CTAG	7 cut(s)	399, 606, 1067, 1157, 1274, 1466, 1992
SstI	GAGCTC	1 cut(s)	1739
StuI	AGGCCT	1 cut(s)	1117
StyD4I	CCNGG	3 cut(s)	167, 324, 1469
TaaI	ACNGT	7 cut(s)	504, 920, 1591, 2103, 2291, 2309, 2416
TaiI	ACGT	3 cut(s)	637, 1400, 1641
TaqI	TCGA	6 cut(s)	533, 1776, 1931, 2132, 2328, 2461
TatI	WGTACW	1 cut(s)	1836
TauI	GCSGC	4 cut(s)	70, 195, 2285, 2437
TfiI	GAWTC	9 cut(s)	258, 321, 677, 875, 910, 1390, 1612, 1765, 1876
TscAI	CASTG	7 cut(s)	69, 78, 377, 978, 1700, 2029, 2397
TseFI	GTSAC	4 cut(s)	498, 820, 1822, 2291
TseI	GCWGC	3 cut(s)	1329, 1842, 2072
Tsp45I	GTSAC	4 cut(s)	498, 820, 1822, 2291
TspDTI	ATGAA	7 cut(s)	168, 844, 1328, 1356, 1359, 1648, 2193
TspRI	CASTG	7 cut(s)	69, 78, 377, 978, 1700, 2029, 2397
Vha464I	CTTAAG	2 cut(s)	1033, 1997
VpaK11BI	GGWCC	4 cut(s)	1153, 1240, 1816, 2416
XagI	CCTNNNNNAGG	4 cut(s)	842, 1111, 1423, 2330
XapI	RAATTY	5 cut(s)	86, 989, 1283, 2063, 2206
XbaI	TCTAGA	1 cut(s)	398
XmiI	GTMKAC	3 cut(s)	1304, 1542, 1866
XmnI	GAANNNNTTC	2 cut(s)	1479, 1688
XspI	CTAG	7 cut(s)	399, 606, 1067, 1157, 1274, 1466, 1992
ZraI	GACGTC	1 cut(s)	1398
ZrmI	AGTACT	1 cut(s)	1838
Zsp2I	ATGCAT	1 cut(s)	1316

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.