Rh2AG015300

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0002858
Physical Location & Seq
Reverse (-)
1184897 .. 1188772
3876 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG015300.1

Sequence Viewer

Length: 2982 bp
ATGGAACTCATCCTAAATGCAGATGAGAATGAATACAGAGAAGGTGTGGAGCCAACTTTGGAGTTTGTGATGACCGAAAAAGACATAACTGGGACTGGAGCACCAGCCACTCTGCTGGTTTTTAATAATGAGGTTGGATTTTCCAGGGAGAACATGGATTCCATTTGTGGTATGGGCCATTCTACAAAGAAGGACAAGAGACAGCAGAGTCTTATTGGAGAGAGAGGAAGTGGATTTAAAAGTGTATTTCTTGTGAGTTCACAGCCTCACATAATTAGCCATGGTTATTGTGTCAGATTCTTGGAAGAACCAGATCAAGATTGTGGTATTGGTTATATAGTTCCCCATTGGGTTAGTGGGGAGCCTTCTCTTTCTAGCATATTAGATGTATATGGGTTATGCAATGTCTTGCCTACTACCACGATTGTTCTTCCTCTGAAGCCTGAGAAGGTTGAAGCCGTGAGAGTTCAATTGTCACAATTGCGTCCAGAGATTCTCTTGTTCTTGTCCAAGCTAAAGCAAGTACATGTACGCTGGTGTGATCCTGAAGCAACAGATGATTTCTCAAGGTTTTGTAAAACTAGTGAGACTGAACAAATGGAGTTACATAAAGCCACGTCACGTGTTGTTCAACTTTCAGTTAAGCAAAGAAAGGGTGATAGTGAGGAGTTGTGCAAGTATTACTTGTGGGAGGAGGCATTTCCCGTAAAACCTGCTAATAGAGTTGGTATAAGGATGAATGTGCAGAAATGGGTGATTACCCTTGCTTTTCCATCCAGAGAAAGGATGGGAAAGGCAACTTCTTCTGTTGGTATATTTGCTTGCCTGCCCACGGAAATGGTCACAAACTTCCCATTTCTCATTCAAGCAGACTTCATTATGAATGCTTCACGAGATTGTATACTGTTAGACAATGTATGGAACTTGGGAATTCTTGAGTGTATCCCATCATTATTTGTGGATGCTTTTCAGTCTCACTCCCTCCATTCTTCAGTGGATGAGCCATTTGAATATTTACCTGCTCAAGCTTCATCAATTCCTGAGTTTAACAAGGTAAGAGAGTCCATTAGAACTAGATTGCAAAGTTTAGTGATAGTGCCTTGCCAAATACTTGAGGGTACACTTTCCTTCGTGCTGCCTCAAGATGCAGTTCGAGTCCTGCCAAAATTTAGGGACCTAGTGATTGGAATTAGAGCAAAGGGTAATGTTTTGAGTGGTTCATCTTCATCTTTATTGAGGAGAGTCTTGCATCCGACTCTGGACCTTGAAAAGTACAATGCAGTTCTGAAGTTTCTAGATGTGAAATGTGCTGATGATCATTGGTATACAAAATGCGTCCAAGGTCTCTGCAACCCCACTGAGGATGAAATGGTTATAGCAGATAGCATTATTTCATTGCTAGAGTGTATCAAGTTTCTGATGTCAAGCTCTCTTGATGATCCCTTGGTGCGTGACTTCATCAAGAGCATTGGAAAAAGAAGGTTTTTGAAGACCTTGAATGGTTATAAAACACCAGAAGAATGTGTTCTGTTTGATCCTGCCTGGGAAAGTATTCTGAATGGGACAGATACACCGACCATTGATGTAAATTTTTACGGAACTGAAATTTTTCAGTACAAGAATCAGTTGAGAGATATTGGCGTGATGGTAGATCCTTTGAGTGTTTGTTCTCTTCTTTCTGGAATTCTGACCAAGCTGGCAAACCAGCCCCATTCTTGTTATACACCAGACACTACCTTTATAACGAGGATTTACAGCTTCCTCAACAAGTTCCACTGGCGTCCAGAAGCACCAGATGAAAGCCAATTTCAGGTGTGGATACCTGACCCTCCTCCAGGTGGATGGATTATGCCTCAGCAATGTGTACTTCATGTCAATCATGTTAGGAAGTATCTGTTTAGCTCATTCTTTTGGCTTGACGAACTTTACGCTGAAGAGCTCCTCCCCTTGTTTTCTTCAGCCTTTGGGGTTGCAGAAAATCCTTCCATCCATCATTACTTAAAGCTATGGGAAACATGGGCGTCATCGGAGAACTTGCAAGTGACTCTGGTAGAGTGCTGCTCCTTCTGGGAGTATGTTATAGACAACTGGAATCCAAAAGTTGAAGAGACTCTAAGACAGAAGTTGACAAAATTACCTGCCACAAAGTCAACAGCTGAAGAAATATATCTGATCAACAGAACAGAAGTGTTCCTAGCTGATGACTTGCAACTGAAGAAAACTTTCCTGAGCTATGACAAGGCCCCATTGTTCGTGTGGTTTCCCACAAGCAACTGCTTGTCATCTGTTCCTCCTAGAAGACTTTATGCCATTTACGAGTCCCTTGGAGTGAGGATGGTGTCCGAGTCATTTGTGTGCAAACCGCATACCATCCTATTATTGGAGGACCTGGATAAGATTGATGCACAAGATGGATTGATTGGCAGGGGTTTAATCAAACTTATTTTGGGTTTTCTTGCTGGTCCGGAGGTTAATATGCCATTGAAAGAGAGACACAATGCTGCATGCTCACTCATTAAACTATCAGTGTATAAACTTGAGAGACCAAATCAAGTCATTTATCGACTGATGCCATCTGCTTGTACAACAGTAGATGTAAAAAAAGTGAAGCTAGTTACCTGGAAGAAGATTTCTCATCGTTTGCTCATTGATAACTCAGGCTACAGAAATGGAAAATCTGATCCAGAATTTGTTACAGCTTTCGCTGACGAACTCGCTCAAGGACTGTTAGTGCAGGCAAGACATTATGCAGCAGCACTGAGCAAACTTATCCAATGGGGATTTATGTTCGATTTTAATGAGAAGGAAGTGGATTTTTGGCTGATGAGAGAAAATTTAGAGTTGCCTATGGAAGATAAGGAGTTTCTTAGTGCTGCATTCCTCTCATCAACAGAACTTGTTAGGGGAAAGCAGTCATCTATGGAGACAGAGGAATCAGGTCGTTCCACAGCAATGCCTTCATGCAAGAAGTTGCGTCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

993

Amino Acids

112.94

Weight (kDa)

5.7

Isoelectric Point (pI)

43.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SACS PF25794 7 - 98 2.6e-07 Sacsin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1506, 1742
AasI GACNNNNNNGTC 1 cut(s) 207
Acc36I ACCTGC 3 cut(s) 721, 1027, 2146
AccI GTMKAC 2 cut(s) 901, 1325
AccIII TCCGGA 1 cut(s) 2464
AciI CCGC 1 cut(s) 2363
AclWI GGATC 5 cut(s) 536, 1433, 1529, 1646, 2675
AcsI RAATTY 7 cut(s) 930, 1166, 1588, 1605, 1683, 2687, 2833
AcuI CTGAAG 8 cut(s) 458, 567, 975, 1307, 1941, 1953, 2178, 2234
AcvI CACGTG 1 cut(s) 623
AcyI GRCGYC 2 cut(s) 1780, 2021
AfaI GTAC 7 cut(s) 525, 531, 1120, 1274, 1616, 1866, 2584
AfiI CCNNNNNNNGG 7 cut(s) 783, 832, 1360, 1810, 1835, 1838, 2380
AflIII ACRYGT 2 cut(s) 526, 622
AhlI ACTAGT 1 cut(s) 581
AjiI CACGTC 1 cut(s) 618
AjnI CCWGG 5 cut(s) 143, 1541, 1834, 2388, 2618
AloI GAACNNNNNNTCC 2 cut(s) 143, 175
Alw21I GWGCWC 2 cut(s) 103, 1941
Alw26I GTCTC 8 cut(s) 193, 581, 978, 1349, 2102, 2485, 2536, 2918
AlwI GGATC 5 cut(s) 536, 1433, 1529, 1646, 2675
Aor13HI TCCGGA 1 cut(s) 2464
AoxI GGCC 2 cut(s) 175, 2241
ApeKI GCWGC 6 cut(s) 1135, 2058, 2501, 2750, 2753, 2873
ApoI RAATTY 7 cut(s) 930, 1166, 1588, 1605, 1683, 2687, 2833
Asp700I GAANNNNTTC 4 cut(s) 1524, 1551, 1608, 2222
AspS9I GGNCC 6 cut(s) 175, 1174, 1261, 2242, 2386, 2462
AsuHPI GGTGA 2 cut(s) 668, 766
AvaII GGWCC 4 cut(s) 1174, 1261, 2386, 2462
BanII GRGCYC 1 cut(s) 1941
BauI CACGAG 1 cut(s) 891
BbrPI CACGTG 1 cut(s) 623
BbsI GAAGAC 2 cut(s) 1496, 2305
Bbv12I GWGCWC 2 cut(s) 103, 1941
BbvCI CCTCAGC 1 cut(s) 1854
BbvI GCAGC 6 cut(s) 1122, 2045, 2488, 2762, 2765, 2860
BceAI ACGGC 1 cut(s) 443
BciT130I CCWGG 5 cut(s) 145, 1543, 1836, 2390, 2620
BciVI GTATCC 2 cut(s) 953, 1812
BclI TGATCA 2 cut(s) 1315, 2172
BcoDI GTCTC 8 cut(s) 193, 581, 978, 1349, 2102, 2485, 2536, 2918
BcuI ACTAGT 1 cut(s) 581
BfaI CTAG 9 cut(s) 375, 582, 1074, 1178, 1295, 1400, 2195, 2295, 2612
BfmI CTRYAG 1 cut(s) 2662
BfuAI ACCTGC 3 cut(s) 721, 1027, 2146
BfuI GTATCC 2 cut(s) 953, 1812
BisI GCNGC 6 cut(s) 1136, 2059, 2502, 2751, 2754, 2874
BlsI GCNGC 6 cut(s) 1137, 2060, 2503, 2752, 2755, 2875
Bme1390I CCNGG 5 cut(s) 145, 1543, 1836, 2390, 2620
Bme18I GGWCC 4 cut(s) 1174, 1261, 2386, 2462
BmgBI CACGTC 1 cut(s) 618
BmgT120I GGNCC 6 cut(s) 175, 1174, 1261, 2242, 2386, 2462
BmiI GGNNCC 4 cut(s) 51, 363, 1175, 2244
BmrFI CCNGG 5 cut(s) 145, 1543, 1836, 2390, 2620
BmrI ACTGGG 1 cut(s) 99
BmsI GCATC 5 cut(s) 952, 1135, 1258, 2392, 2559
BmuI ACTGGG 1 cut(s) 99
BpiI GAAGAC 2 cut(s) 1496, 2305
BplI GAGNNNNNCTC 2 cut(s) 2045, 2077
BpmI CTGGAG 2 cut(s) 117, 1818
Bpu10I CCTNAGC 2 cut(s) 1854, 2228
BpuEI CTTGAG 7 cut(s) 550, 956, 1008, 1125, 1133, 2558, 2703
BsaAI YACGTR 1 cut(s) 623
BsaHI GRCGYC 2 cut(s) 1780, 2021
BsaI GGTCTC 2 cut(s) 1349, 2536
BsaJI CCNNGG 7 cut(s) 144, 280, 831, 1339, 1443, 1542, 2323
BsaWI WCCGGW 1 cut(s) 2464
Bsc4I CCNNNNNNNGG 7 cut(s) 783, 832, 1360, 1810, 1835, 1838, 2380
Bse1I ACTGG 4 cut(s) 94, 100, 1781, 2093
Bse3DI GCAATG 4 cut(s) 409, 1394, 1865, 2958
BseAI TCCGGA 1 cut(s) 2464
BseBI CCWGG 5 cut(s) 145, 1543, 1836, 2390, 2620
BseDI CCNNGG 7 cut(s) 144, 280, 831, 1339, 1443, 1542, 2323
BseLI CCNNNNNNNGG 7 cut(s) 783, 832, 1360, 1810, 1835, 1838, 2380
BseMI GCAATG 4 cut(s) 409, 1394, 1865, 2958
BseMII CTCAG 7 cut(s) 435, 1032, 1350, 1868, 2219, 2670, 2750
BseNI ACTGG 4 cut(s) 94, 100, 1781, 2093
BseRI GAGGAG 5 cut(s) 680, 707, 1252, 1821, 1931
BseXI GCAGC 6 cut(s) 1122, 2045, 2488, 2762, 2765, 2860
BsgI GTGCAG 2 cut(s) 764, 2753
BshFI GGCC 2 cut(s) 177, 2243
BsiHKAI GWGCWC 2 cut(s) 103, 1941
BsiSI CCGG 1 cut(s) 2465
BslFI GGGAC 4 cut(s) 106, 1187, 1576, 2305
BslI CCNNNNNNNGG 7 cut(s) 783, 832, 1360, 1810, 1835, 1838, 2380
BsmAI GTCTC 8 cut(s) 193, 581, 978, 1349, 2102, 2485, 2536, 2918
BsmFI GGGAC 4 cut(s) 106, 1187, 1576, 2305
BsmI GAATGC 2 cut(s) 889, 2876
BsnI GGCC 2 cut(s) 177, 2243
Bso31I GGTCTC 2 cut(s) 1349, 2536
Bsp1286I GDGCHC 2 cut(s) 103, 1941
Bsp13I TCCGGA 1 cut(s) 2464
Bsp1407I TGTACA 1 cut(s) 2582
Bsp143I GATC 8 cut(s) 313, 541, 1315, 1438, 1534, 1651, 2172, 2680
Bsp19I CCATGG 1 cut(s) 280
BspACI CCGC 1 cut(s) 2363
BspANI GGCC 2 cut(s) 177, 2243
BspCNI CTCAG 7 cut(s) 436, 1033, 1351, 1867, 2220, 2669, 2751
BspEI TCCGGA 1 cut(s) 2464
BspLI GGNNCC 4 cut(s) 51, 363, 1175, 2244
BspMI ACCTGC 3 cut(s) 721, 1027, 2146
BspPI GGATC 5 cut(s) 536, 1433, 1529, 1646, 2675
BspQI GCTCTTC 1 cut(s) 1929
BspTNI GGTCTC 2 cut(s) 1349, 2536
BsrDI GCAATG 4 cut(s) 409, 1394, 1865, 2958
BsrGI TGTACA 1 cut(s) 2582
BsrI ACTGG 4 cut(s) 94, 100, 1781, 2093
BssECI CCNNGG 7 cut(s) 144, 280, 831, 1339, 1443, 1542, 2323
BssMI GATC 8 cut(s) 313, 541, 1315, 1438, 1534, 1651, 2172, 2680
BssNAI GTATAC 2 cut(s) 902, 1326
BssNI GRCGYC 2 cut(s) 1780, 2021
BssSI CACGAG 1 cut(s) 891
BssT1I CCWWGG 4 cut(s) 280, 1339, 1443, 2323
Bst1107I GTATAC 2 cut(s) 902, 1326
Bst2BI CACGAG 1 cut(s) 891
Bst2UI CCWGG 5 cut(s) 145, 1543, 1836, 2390, 2620
Bst4CI ACNGT 3 cut(s) 906, 2590, 2727
Bst6I CTCTTC 3 cut(s) 1677, 1929, 2100
BstACI GRCGYC 2 cut(s) 1780, 2021
BstAUI TGTACA 1 cut(s) 2582
BstBAI YACGTR 1 cut(s) 623
BstC8I GCNNGC 5 cut(s) 823, 827, 1698, 2506, 2736
BstDEI CTNAG 9 cut(s) 444, 1041, 1359, 1854, 2114, 2228, 2656, 2759, 2867
BstDSI CCRYGG 2 cut(s) 280, 831
BstENI CCTNNNNNAGG 1 cut(s) 1833
BstKTI GATC 8 cut(s) 316, 544, 1318, 1441, 1537, 1654, 2175, 2683
BstMAI GTCTC 8 cut(s) 193, 581, 978, 1349, 2102, 2485, 2536, 2918
BstMBI GATC 8 cut(s) 313, 541, 1315, 1438, 1534, 1651, 2172, 2680
BstNI CCWGG 5 cut(s) 145, 1543, 1836, 2390, 2620
BstNSI RCATGY 2 cut(s) 530, 2508
BstSCI CCNGG 5 cut(s) 143, 1541, 1834, 2388, 2618
BstSFI CTRYAG 1 cut(s) 2662
BstV1I GCAGC 6 cut(s) 1122, 2045, 2488, 2762, 2765, 2860
BstV2I GAAGAC 2 cut(s) 1496, 2305
BstX2I RGATCY 1 cut(s) 1651
BstXI CCANNNNNNTGG 3 cut(s) 115, 838, 1842
BstYI RGATCY 1 cut(s) 1651
BstZ17I GTATAC 2 cut(s) 902, 1326
BsuI GTATCC 2 cut(s) 953, 1812
BsuRI GGCC 2 cut(s) 177, 2243
BtgI CCRYGG 2 cut(s) 280, 831
BtrI CACGTC 1 cut(s) 618
BtsIMutI CAGTG 5 cut(s) 999, 1356, 1774, 2532, 2756
BveI ACCTGC 3 cut(s) 721, 1027, 2146
Cac8I GCNNGC 5 cut(s) 823, 827, 1698, 2506, 2736
Cfr13I GGNCC 6 cut(s) 175, 1174, 1261, 2242, 2386, 2462
CseI GACGC 5 cut(s) 473, 1324, 1769, 2010, 2963
Csp6I GTAC 7 cut(s) 524, 530, 1119, 1273, 1615, 1865, 2583
CviAII CATG 8 cut(s) 154, 281, 527, 1871, 1880, 2016, 2505, 2961
CviQI GTAC 7 cut(s) 524, 530, 1119, 1273, 1615, 1865, 2583
DdeI CTNAG 9 cut(s) 444, 1041, 1359, 1854, 2114, 2228, 2656, 2759, 2867
DpnI GATC 8 cut(s) 315, 543, 1317, 1440, 1536, 1653, 2174, 2682
DpnII GATC 8 cut(s) 313, 541, 1315, 1438, 1534, 1651, 2172, 2680
DraI TTTAAA 1 cut(s) 238
DrdI GACNNNNNNGTC 1 cut(s) 207
DseDI GACNNNNNNGTC 1 cut(s) 207
Eam1104I CTCTTC 3 cut(s) 1677, 1929, 2100
EarI CTCTTC 3 cut(s) 1677, 1929, 2100
Ecl136II GAGCTC 1 cut(s) 1939
Eco130I CCWWGG 4 cut(s) 280, 1339, 1443, 2323
Eco24I GRGCYC 1 cut(s) 1941
Eco31I GGTCTC 2 cut(s) 1349, 2536
Eco47I GGWCC 4 cut(s) 1174, 1261, 2386, 2462
Eco53kI GAGCTC 1 cut(s) 1939
Eco57I CTGAAG 8 cut(s) 458, 567, 975, 1307, 1941, 1953, 2178, 2234
Eco72I CACGTG 1 cut(s) 623
EcoICRI GAGCTC 1 cut(s) 1939
EcoNI CCTNNNNNAGG 1 cut(s) 1833
EcoO109I RGGNCCY 3 cut(s) 1174, 2242, 2386
EcoRI GAATTC 2 cut(s) 930, 1683
EcoRII CCWGG 5 cut(s) 143, 1541, 1834, 2388, 2618
EcoT14I CCWWGG 4 cut(s) 280, 1339, 1443, 2323
EcoT38I GRGCYC 1 cut(s) 1941
ErhI CCWWGG 4 cut(s) 280, 1339, 1443, 2323
FaeI CATG 8 cut(s) 157, 284, 530, 1874, 1883, 2019, 2508, 2964
FalI AAGNNNNNCTT 2 cut(s) 668, 700
FaqI GGGAC 4 cut(s) 106, 1187, 1576, 2305
FatI CATG 8 cut(s) 153, 280, 526, 1870, 1879, 2015, 2504, 2960
FbaI TGATCA 2 cut(s) 1315, 2172
FblI GTMKAC 2 cut(s) 901, 1325
Fnu4HI GCNGC 6 cut(s) 1136, 2059, 2502, 2751, 2754, 2874
FriOI GRGCYC 1 cut(s) 1941
Fsp4HI GCNGC 6 cut(s) 1136, 2059, 2502, 2751, 2754, 2874
FspBI CTAG 9 cut(s) 375, 582, 1074, 1178, 1295, 1400, 2195, 2295, 2612
GluI GCNGC 6 cut(s) 1136, 2059, 2502, 2751, 2754, 2874
GsuI CTGGAG 2 cut(s) 117, 1818
HaeIII GGCC 2 cut(s) 177, 2243
HapII CCGG 1 cut(s) 2465
HgaI GACGC 5 cut(s) 473, 1324, 1769, 2010, 2963
Hin1I GRCGYC 2 cut(s) 1780, 2021
Hin1II CATG 8 cut(s) 157, 284, 530, 1874, 1883, 2019, 2508, 2964
HincII GTYRAC 2 cut(s) 2127, 2151
HindII GTYRAC 2 cut(s) 2127, 2151
HindIII AAGCTT 1 cut(s) 1026
HpaII CCGG 1 cut(s) 2465
HphI GGTGA 2 cut(s) 668, 766
Hpy166II GTNNAC 7 cut(s) 260, 902, 1121, 1326, 1865, 2127, 2151
Hpy8I GTNNAC 7 cut(s) 260, 902, 1121, 1326, 1865, 2127, 2151
HpyCH4III ACNGT 3 cut(s) 906, 2590, 2727
HpyCH4IV ACGT 2 cut(s) 617, 622
HpyF3I CTNAG 9 cut(s) 444, 1041, 1359, 1854, 2114, 2228, 2656, 2759, 2867
HpySE526I ACGT 2 cut(s) 617, 622
Hsp92I GRCGYC 2 cut(s) 1780, 2021
Hsp92II CATG 8 cut(s) 157, 284, 530, 1874, 1883, 2019, 2508, 2964
Kpn2I TCCGGA 1 cut(s) 2464
Ksp22I TGATCA 2 cut(s) 1315, 2172
Kzo9I GATC 8 cut(s) 313, 541, 1315, 1438, 1534, 1651, 2172, 2680
LguI GCTCTTC 1 cut(s) 1929
LmnI GCTCC 5 cut(s) 49, 98, 361, 1944, 2066
Lsp1109I GCAGC 6 cut(s) 1122, 2045, 2488, 2762, 2765, 2860
LweI GCATC 5 cut(s) 952, 1135, 1258, 2392, 2559
MaeI CTAG 9 cut(s) 375, 582, 1074, 1178, 1295, 1400, 2195, 2295, 2612
MaeII ACGT 2 cut(s) 617, 622
MaeIII GTNAC 8 cut(s) 474, 603, 618, 841, 1451, 2041, 2614, 2692
MalI GATC 8 cut(s) 315, 543, 1317, 1440, 1536, 1653, 2174, 2682
MboI GATC 8 cut(s) 313, 541, 1315, 1438, 1534, 1651, 2172, 2680
MfeI CAATTG 2 cut(s) 470, 479
MflI RGATCY 1 cut(s) 1651
MhlI GDGCHC 2 cut(s) 103, 1941
MlyI GAGTC 9 cut(s) 217, 1070, 1164, 1249, 1251, 2038, 2104, 2327, 2354
MmeI TCCRAC 2 cut(s) 115, 1277
MroI TCCGGA 1 cut(s) 2464
MroXI GAANNNNTTC 4 cut(s) 1524, 1551, 1608, 2222
MseI TTAA 9 cut(s) 123, 237, 642, 1047, 2000, 2432, 2472, 2517, 2796
MslI CAYNNNNRTG 3 cut(s) 836, 2353, 2951
MspA1I CMGCKG 1 cut(s) 2156
MspI CCGG 1 cut(s) 2465
MspR9I CCNGG 5 cut(s) 145, 1543, 1836, 2390, 2620
MunI CAATTG 2 cut(s) 470, 479
Mva1269I GAATGC 2 cut(s) 889, 2876
MvaI CCWGG 5 cut(s) 145, 1543, 1836, 2390, 2620
NcoI CCATGG 1 cut(s) 280
NdeII GATC 8 cut(s) 313, 541, 1315, 1438, 1534, 1651, 2172, 2680
NlaIII CATG 8 cut(s) 157, 284, 530, 1874, 1883, 2019, 2508, 2964
NlaIV GGNNCC 4 cut(s) 51, 363, 1175, 2244
NmuCI GTSAC 5 cut(s) 474, 618, 841, 1451, 2041
NspI RCATGY 2 cut(s) 530, 2508
PaeI GCATGC 1 cut(s) 2508
PciI ACATGT 1 cut(s) 526
PciSI GCTCTTC 1 cut(s) 1929
PctI GAATGC 2 cut(s) 889, 2876
PdmI GAANNNNTTC 4 cut(s) 1524, 1551, 1608, 2222
PfeI GAWTC 6 cut(s) 158, 297, 493, 1621, 2092, 2933
PkrI GCNGC 6 cut(s) 1137, 2060, 2503, 2752, 2755, 2875
PleI GAGTC 9 cut(s) 216, 1069, 1163, 1249, 1250, 2038, 2104, 2326, 2353
PmaCI CACGTG 1 cut(s) 623
PmlI CACGTG 1 cut(s) 623
PpsI GAGTC 9 cut(s) 216, 1069, 1163, 1249, 1250, 2038, 2104, 2326, 2353
Ppu21I YACGTR 1 cut(s) 623
PpuMI RGGWCCY 2 cut(s) 1174, 2386
PscI ACATGT 1 cut(s) 526
PsiI TTATAA 2 cut(s) 1506, 1742
Psp124BI GAGCTC 1 cut(s) 1941
Psp5II RGGWCCY 2 cut(s) 1174, 2386
Psp6I CCWGG 5 cut(s) 143, 1541, 1834, 2388, 2618
PspCI CACGTG 1 cut(s) 623
PspGI CCWGG 5 cut(s) 143, 1541, 1834, 2388, 2618
PspN4I GGNNCC 4 cut(s) 51, 363, 1175, 2244
PspPI GGNCC 6 cut(s) 175, 1174, 1261, 2242, 2386, 2462
PspPPI RGGWCCY 2 cut(s) 1174, 2386
PsuI RGATCY 1 cut(s) 1651
PvuII CAGCTG 1 cut(s) 2156
RsaI GTAC 7 cut(s) 525, 531, 1120, 1274, 1616, 1866, 2584
RsaNI GTAC 7 cut(s) 524, 530, 1119, 1273, 1615, 1865, 2583
RseI CAYNNNNRTG 3 cut(s) 836, 2353, 2951
SacI GAGCTC 1 cut(s) 1941
SapI GCTCTTC 1 cut(s) 1929
SaqAI TTAA 9 cut(s) 123, 237, 642, 1047, 2000, 2432, 2472, 2517, 2796
SatI GCNGC 6 cut(s) 1136, 2059, 2502, 2751, 2754, 2874
Sau3AI GATC 8 cut(s) 313, 541, 1315, 1438, 1534, 1651, 2172, 2680
Sau96I GGNCC 6 cut(s) 175, 1174, 1261, 2242, 2386, 2462
SchI GAGTC 9 cut(s) 217, 1070, 1164, 1249, 1251, 2038, 2104, 2327, 2354
ScrFI CCNGG 5 cut(s) 145, 1543, 1836, 2390, 2620
SduI GDGCHC 2 cut(s) 103, 1941
SfaNI GCATC 5 cut(s) 952, 1135, 1258, 2392, 2559
SfcI CTRYAG 1 cut(s) 2662
SinI GGWCC 4 cut(s) 1174, 1261, 2386, 2462
SmiMI CAYNNNNRTG 3 cut(s) 836, 2353, 2951
SmlI CTYRAG 7 cut(s) 565, 935, 1023, 1112, 1140, 2537, 2718
SmoI CTYRAG 7 cut(s) 565, 935, 1023, 1112, 1140, 2537, 2718
SpeI ACTAGT 1 cut(s) 581
SphI GCATGC 1 cut(s) 2508
SsiI CCGC 1 cut(s) 2363
SspI AATATT 1 cut(s) 1013
SspMI CTAG 9 cut(s) 375, 582, 1074, 1178, 1295, 1400, 2195, 2295, 2612
SstI GAGCTC 1 cut(s) 1941
StyD4I CCNGG 5 cut(s) 143, 1541, 1834, 2388, 2618
StyI CCWWGG 4 cut(s) 280, 1339, 1443, 2323
TaaI ACNGT 3 cut(s) 906, 2590, 2727
TaiI ACGT 2 cut(s) 620, 625
TaqI TCGA 3 cut(s) 1153, 2563, 2790
TaqII GACCGA 1 cut(s) 89
TatI WGTACW 5 cut(s) 523, 1272, 1614, 1864, 2582
TfiI GAWTC 6 cut(s) 158, 297, 493, 1621, 2092, 2933
Tru1I TTAA 9 cut(s) 123, 237, 642, 1047, 2000, 2432, 2472, 2517, 2796
Tru9I TTAA 9 cut(s) 123, 237, 642, 1047, 2000, 2432, 2472, 2517, 2796
TscAI CASTG 5 cut(s) 999, 1363, 1781, 2532, 2763
TseFI GTSAC 5 cut(s) 474, 618, 841, 1451, 2041
TseI GCWGC 6 cut(s) 1135, 2058, 2501, 2750, 2753, 2873
Tsp45I GTSAC 5 cut(s) 474, 618, 841, 1451, 2041
TspGWI ACGGA 2 cut(s) 848, 1611
TspRI CASTG 5 cut(s) 999, 1363, 1781, 2532, 2763
VpaK11BI GGWCC 4 cut(s) 1174, 1261, 2386, 2462
XagI CCTNNNNNAGG 1 cut(s) 1833
XapI RAATTY 7 cut(s) 930, 1166, 1588, 1605, 1683, 2687, 2833
XbaI TCTAGA 1 cut(s) 1294
XceI RCATGY 2 cut(s) 530, 2508
XcmI CCANNNNNNNNNTGG 6 cut(s) 151, 169, 353, 784, 2253, 2377
XmiI GTMKAC 2 cut(s) 901, 1325
XmnI GAANNNNTTC 4 cut(s) 1524, 1551, 1608, 2222
XspI CTAG 9 cut(s) 375, 582, 1074, 1178, 1295, 1400, 2195, 2295, 2612
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.