RchiOBHm_Chr3g0450521

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Reverse (-)
2018433 .. 2019236
804 bp
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UTR
Exon/CDS
Intron
PRQ41785

Sequence Viewer

Length: 156 bp
ATGCTCTCTTCTCTGAATCCCGTAAGGGAGGTTTCTCGACGGCGGCTATCTTCGGGTGGTGGTGGTCTTGTGTTCTTGACTACGACGGGTGTCCTTTCGCCTTTCTCTAGTCTAATTCTTGGTGGTGCCGGCGGGACTACTCGACGGGGCTCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

51

Amino Acids

5.16

Weight (kDa)

12.0

Isoelectric Point (pI)

83.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 125
AciI CCGC 2 cut(s) 43, 132
BanI GGYRCC 1 cut(s) 125
BanII GRGCYC 1 cut(s) 152
BceAI ACGGC 1 cut(s) 56
BfaI CTAG 2 cut(s) 108, 154
BisI GCNGC 1 cut(s) 44
BlsI GCNGC 1 cut(s) 45
BmiI GGNNCC 2 cut(s) 127, 151
BoxI GACNNNNGTC 1 cut(s) 89
Bse118I RCCGGY 1 cut(s) 128
BshNI GGYRCC 1 cut(s) 125
BsiSI CCGG 1 cut(s) 129
BslFI GGGAC 1 cut(s) 148
BsmFI GGGAC 1 cut(s) 148
Bsp1286I GDGCHC 1 cut(s) 152
BspACI CCGC 2 cut(s) 43, 132
BspLI GGNNCC 2 cut(s) 127, 151
BspT107I GGYRCC 1 cut(s) 125
BsrFI RCCGGY 1 cut(s) 128
BssAI RCCGGY 1 cut(s) 128
Bst6I CTCTTC 1 cut(s) 13
BstC8I GCNNGC 1 cut(s) 130
BstPAI GACNNNNGTC 1 cut(s) 89
Cac8I GCNNGC 1 cut(s) 130
Cfr10I RCCGGY 1 cut(s) 128
CviJI RGCY 2 cut(s) 46, 150
CviKI_1 RGCY 2 cut(s) 46, 150
Eam1104I CTCTTC 1 cut(s) 13
EarI CTCTTC 1 cut(s) 13
Eco24I GRGCYC 1 cut(s) 152
EcoT38I GRGCYC 1 cut(s) 152
FaqI GGGAC 1 cut(s) 148
FauI CCCGC 1 cut(s) 125
Fnu4HI GCNGC 1 cut(s) 44
FriOI GRGCYC 1 cut(s) 152
Fsp4HI GCNGC 1 cut(s) 44
FspBI CTAG 2 cut(s) 108, 154
GluI GCNGC 1 cut(s) 44
HapII CCGG 1 cut(s) 129
HinfI GANTC 1 cut(s) 16
HpaII CCGG 1 cut(s) 129
Hpy188I TCNGA 1 cut(s) 15
Hpy188III TCNNGA 2 cut(s) 36, 76
Hpy99I CGWCG 3 cut(s) 42, 88, 147
KroI GCCGGC 1 cut(s) 128
KroNI GCCGGC 1 cut(s) 130
LmnI GCTCC 1 cut(s) 155
LpnPI CCDG 1 cut(s) 142
MaeI CTAG 2 cut(s) 108, 154
MboII GAAGA 1 cut(s) 42
MhlI GDGCHC 1 cut(s) 152
MluCI AATT 1 cut(s) 114
MnlI CCTC 1 cut(s) 22
MroNI GCCGGC 1 cut(s) 128
MspI CCGG 1 cut(s) 129
NaeI GCCGGC 1 cut(s) 130
NgoMIV GCCGGC 1 cut(s) 128
NlaIV GGNNCC 2 cut(s) 127, 151
PdiI GCCGGC 1 cut(s) 130
PfeI GAWTC 1 cut(s) 16
PkrI GCNGC 1 cut(s) 45
PshAI GACNNNNGTC 1 cut(s) 89
PspN4I GGNNCC 2 cut(s) 127, 151
SatI GCNGC 1 cut(s) 44
SduI GDGCHC 1 cut(s) 152
SetI ASST 1 cut(s) 33
Sse9I AATT 1 cut(s) 114
SsiI CCGC 2 cut(s) 43, 132
SspMI CTAG 2 cut(s) 108, 154
TaqI TCGA 2 cut(s) 37, 142
TasI AATT 1 cut(s) 114
TauI GCSGC 1 cut(s) 46
TfiI GAWTC 1 cut(s) 16
XspI CTAG 2 cut(s) 108, 154
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.