Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000042.1

Orthogroup ID

OG0006968

Physical Location & Seq

Genomic Coordinates Forward (+)

261803 .. 268791

Gene Structure 6989 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000042.1_g000043.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2028 bp

atgcttgcgtacggtgcagttgctgatcaatgtgatgaaatcactagaatgggagcttctacagcgctgaaatgtctgaagaagttatgtaggcaagtcaagtttctttactctgggtggttccttcgtcctccaaattctgttgacttatataggcttctcaatagaggacaacgtcgtgggtttctaggcatgattgggagcatcgattgcatgcattgggagtggaagaattgcctaactggctgggctggagctttctcgggtcgaaagggtagactaactattattcttgaagctgtggcgtcttacgatacgcatatatggcatgctttctttggaacccctggagctcaaaatgacctcaacgttcttggtgcatctaatgtgttcgagcgtgtcataagtggaactgctcatctggttgagtttgaggtagagttggcctacctccacaaatgcctacaagatgatttggtgatgcacaactggaacatggatgataaatctaaaggttataaattatattctgctaatcattcacctagaatttttgaaacacatcaagtaactgtaactggtcatgtaactgaccatgtcactgaccaagtaactgtaactggtcacgtaactgaccatgtcactgttactggtcacttttgggctgatctgagtttggatcagtatactagtgatgtggattctctggggaggatggatgcgagggtgggtattggtgttcgatctgtggattgtggtggtgatcgcatctttggtggtcgctgcgttgattcttcaggttggctttcttgggatcacttagcttcgatggtgctgatggtggatcggtcttgctcagcgacagatctgagttattatggtgatggcggggtattatcggacattgctggtgggttattgttatggcttgccttgggatcggcaacggaagtgatcctggggacggcggcggttttggccttattggtggcggcggcattgctgggacagaggtctctagggcttctccaagctggtcgtcacactgatcatcgcacagattccaccgatcatcacacagatagccatcgtcctactgatcatcacatagatttcaaggatcatcacatagatagcaattgtccagctgatcatcacatagatttcaccgattcactgtgcaccgccgatcttcaacccttgatcttccactccacatgcaaaatcgtccctcaaggcgggtatgaggatgatcagaaggaggaggagattccaaaaccaagaaggatcggccgagacgtcgtcgaaaaagtggatttcctgtctggtcaggctacgcgccactgttcacatatgcgatttccacttttcggtgaaccattgtgcaaaccaacaccacagagcaaagcacgaggctggtctgagtcatttccggcttgtcccgtcgtcggaggtgagagaaccagtcgggtcaggtcggcgggtttctgtcgggtctgggttgggcgaaggagagagaacagacagaagggagagtttccgaaaaaggaaatgagattttatgaaaatattttcggaaattccttatttataccaaaatggaaacttcttccaatggccataacttcttcattcgaactccgatcttcacgttcctcttgtccacgaactcgtatcgacgcgctgtacaactttcgtgaaggaagttttcagagaatcccaacaaataaaaagtttgctgtgggaaaacaagtggtggtttgggggactagatggagaattggagatggaaggagggtgagcattatggctgataaacggttacctagcccagcaagcttcaagattgtaacacattttaattggccagtccaacaaaaggtggagtctctctttaccgagagcgttcttgataaattggtgtggcattacaccaaaaatggtgtctacaatgtgatgtccgcatattgggcagcaaggagttacaaaaccgaaaacgtggttctgagcaagttcaagctacaatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Plant_tran

Protein Analysis

675

Amino Acids

75.93

Weight (kDa)

8.7

Isoelectric Point (pI)

40.01

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006968)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr3g0450521 RchiOBHm_Chr5g0016981 RchiOBHm_Chr5g0017131 RchiOBHm_Chr5g0080491
rosa_laevigata	RLG00000008380 RLG00000009306 RLG00000011699 RLG00000014050 RLG00000031887 RLG00000033397 RLG00000034207
rosa_multiflora	Rmu_sc0009984.1_g000012 Rmu_sc0018107.1_g000004 Rmu_sc0020711.1_g000003 Rmu_ssc0000042.1_g000043
rosa_roxburghii	Rroxscaffold_1G00045480 Rroxscaffold_2G00124780 Rroxscaffold_2G00144500 Rroxscaffold_4G00280800 Rroxscaffold_4G00281990 Rroxscaffold_5G00338410
rosa_rugosa	Rorug01G0207900
rosa_samantha	Rh5BG544600 Rh5CG139000 Rh7CG293400
rosa_wichuraiana	Rw5G039350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	519
AatII	GACGTC	1 cut(s)	1302
AccI	GTMKAC	3 cut(s)	277, 686, 1947
AccII	CGCG	2 cut(s)	1339, 1682
AciI	CCGC	9 cut(s)	888, 968, 971, 992, 995, 1185, 1239, 1481, 1962
AclI	AACGTT	1 cut(s)	369
AclWI	GGATC	7 cut(s)	687, 822, 852, 946, 949, 1128, 1295
AcoI	YGGCCR	3 cut(s)	1291, 1617, 1865
AcsI	RAATTY	3 cut(s)	136, 549, 1579
AcuI	CTGAAG	2 cut(s)	98, 780
AcyI	GRCGYC	2 cut(s)	305, 1299
AfaI	GTAC	2 cut(s)	11, 1688
AfeI	AGCGCT	1 cut(s)	66
AfiI	CCNNNNNNNGG	6 cut(s)	964, 1238, 1370, 1448, 1879, 1968
AgsI	TTSAA	6 cut(s)	296, 557, 1117, 1196, 1843, 2017
AhlI	ACTAGT	1 cut(s)	689
AjnI	CCWGG	2 cut(s)	346, 957
AluBI	AGCT	9 cut(s)	56, 257, 299, 353, 824, 1034, 1148, 1839, 2020
AluI	AGCT	9 cut(s)	56, 257, 299, 353, 824, 1034, 1148, 1839, 2020
Alw21I	GWGCWC	2 cut(s)	355, 1184
Alw26I	GTCTC	3 cut(s)	1020, 1290, 1893
Alw44I	GTGCAC	1 cut(s)	1180
AlwI	GGATC	7 cut(s)	687, 822, 852, 946, 949, 1128, 1295
AlwNI	CAGNNNCTG	1 cut(s)	23
Ama87I	CYCGRG	1 cut(s)	262
Aor51HI	AGCGCT	1 cut(s)	66
AoxI	GGCC	5 cut(s)	444, 978, 1291, 1617, 1865
ApaLI	GTGCAC	1 cut(s)	1180
ApeKI	GCWGC	2 cut(s)	783, 1973
ApoI	RAATTY	3 cut(s)	136, 549, 1579
ArsI	GACNNNNNNTTYG	2 cut(s)	1929, 1961
AspLEI	GCGC	3 cut(s)	67, 1341, 1684
AsuHPI	GGTGA	8 cut(s)	490, 534, 773, 893, 1159, 1385, 1466, 1810
AsuII	TTCGAA	1 cut(s)	1635
AvaI	CYCGRG	1 cut(s)	262
BaeGI	GKGCMC	1 cut(s)	1184
BalI	TGGCCA	2 cut(s)	1619, 1867
BanII	GRGCYC	1 cut(s)	355
BauI	CACGAG	1 cut(s)	1410
Bbv12I	GWGCWC	2 cut(s)	355, 1184
BbvI	GCAGC	2 cut(s)	770, 1985
BccI	CCATC	7 cut(s)	709, 823, 832, 878, 1095, 1767, 1781
BceAI	ACGGC	1 cut(s)	981
BciT130I	CCWGG	2 cut(s)	348, 959
BclI	TGATCA	5 cut(s)	25, 1048, 1099, 1150, 1252
BcoDI	GTCTC	3 cut(s)	1020, 1290, 1893
BcuI	ACTAGT	1 cut(s)	689
BfaI	CTAG	7 cut(s)	45, 188, 546, 690, 1019, 1770, 1827
BfmI	CTRYAG	1 cut(s)	60
BfoI	RGCGCY	1 cut(s)	68
BglI	GCCNNNNNGGC	1 cut(s)	243
BglII	AGATCT	1 cut(s)	865
BisI	GCNGC	5 cut(s)	784, 969, 993, 996, 1974
BlpI	GCTNAGC	1 cut(s)	856
BlsI	GCNGC	5 cut(s)	785, 970, 994, 997, 1975
Bme1390I	CCNGG	2 cut(s)	348, 959
BmeT110I	CYCGRG	1 cut(s)	262
BmiI	GGNNCC	2 cut(s)	122, 343
BmrFI	CCNGG	2 cut(s)	348, 959
BmsI	GCATC	5 cut(s)	213, 389, 471, 709, 777
BoxI	GACNNNNGTC	1 cut(s)	1012
BpmI	CTGGAG	2 cut(s)	273, 369
Bpu1102I	GCTNAGC	1 cut(s)	856
Bpu14I	TTCGAA	1 cut(s)	1635
BpuEI	CTTGAG	1 cut(s)	1218
Bsa29I	ATCGAT	1 cut(s)	207
BsaAI	YACGTR	1 cut(s)	628
BsaBI	GATNNNNATC	1 cut(s)	1086
BsaHI	GRCGYC	2 cut(s)	305, 1299
BsaI	GGTCTC	1 cut(s)	1020
BsaJI	CCNNGG	3 cut(s)	346, 933, 958
Bsc4I	CCNNNNNNNGG	6 cut(s)	964, 1238, 1370, 1448, 1879, 1968
Bse1I	ACTGG	7 cut(s)	247, 494, 583, 625, 655, 1464, 1868
Bse3DI	GCAATG	2 cut(s)	903, 998
Bse8I	GATNNNNATC	1 cut(s)	1086
BseBI	CCWGG	2 cut(s)	348, 959
BseCI	ATCGAT	1 cut(s)	207
BseDI	CCNNGG	3 cut(s)	346, 933, 958
BseGI	GGATG	4 cut(s)	505, 720, 724, 1255
BseJI	GATNNNNATC	1 cut(s)	1086
BseLI	CCNNNNNNNGG	6 cut(s)	964, 1238, 1370, 1448, 1879, 1968
BseMI	GCAATG	2 cut(s)	903, 998
BseMII	CTCAG	5 cut(s)	662, 860, 870, 1413, 1997
BseNI	ACTGG	7 cut(s)	247, 494, 583, 625, 655, 1464, 1868
BseRI	GAGGAG	2 cut(s)	1277, 1280
BseSI	GKGCMC	1 cut(s)	1184
BseX3I	CGGCCG	1 cut(s)	1291
BseXI	GCAGC	2 cut(s)	770, 1985
BseYI	CCCAGC	3 cut(s)	246, 1003, 1831
BsgI	GTGCAG	1 cut(s)	36
Bsh1236I	CGCG	2 cut(s)	1339, 1682
Bsh1285I	CGRYCG	1 cut(s)	1294
BshFI	GGCC	5 cut(s)	446, 980, 1293, 1619, 1867
BshVI	ATCGAT	1 cut(s)	207
BsiEI	CGRYCG	1 cut(s)	1294
BsiHKAI	GWGCWC	2 cut(s)	355, 1184
BsiHKCI	CYCGRG	1 cut(s)	262
BsiSI	CCGG	1 cut(s)	1433
BsiWI	CGTACG	1 cut(s)	9
BslFI	GGGAC	5 cut(s)	976, 1020, 1214, 1425, 1780
BslI	CCNNNNNNNGG	6 cut(s)	964, 1238, 1370, 1448, 1879, 1968
BsmAI	GTCTC	3 cut(s)	1020, 1290, 1893
BsmBI	CGTCTC	1 cut(s)	1290
BsmFI	GGGAC	5 cut(s)	976, 1020, 1214, 1425, 1780
BsnI	GGCC	5 cut(s)	446, 980, 1293, 1619, 1867
Bso31I	GGTCTC	1 cut(s)	1020
BsoBI	CYCGRG	1 cut(s)	262
Bsp119I	TTCGAA	1 cut(s)	1635
Bsp1286I	GDGCHC	2 cut(s)	355, 1184
Bsp1407I	TGTACA	1 cut(s)	1686
Bsp1720I	GCTNAGC	1 cut(s)	856
BspACI	CCGC	9 cut(s)	888, 968, 971, 992, 995, 1185, 1239, 1481, 1962
BspANI	GGCC	5 cut(s)	446, 980, 1293, 1619, 1867
BspCNI	CTCAG	5 cut(s)	663, 861, 869, 1414, 1998
BspDI	ATCGAT	1 cut(s)	207
BspFNI	CGCG	2 cut(s)	1339, 1682
BspLI	GGNNCC	2 cut(s)	122, 343
BspPI	GGATC	7 cut(s)	687, 822, 852, 946, 949, 1128, 1295
BspT104I	TTCGAA	1 cut(s)	1635
BspTNI	GGTCTC	1 cut(s)	1020
BsrDI	GCAATG	2 cut(s)	903, 998
BsrGI	TGTACA	1 cut(s)	1686
BsrI	ACTGG	7 cut(s)	247, 494, 583, 625, 655, 1464, 1868
BssECI	CCNNGG	3 cut(s)	346, 933, 958
BssNAI	GTATAC	1 cut(s)	687
BssNI	GRCGYC	2 cut(s)	305, 1299
BssSI	CACGAG	1 cut(s)	1410
BssT1I	CCWWGG	1 cut(s)	933
Bst1107I	GTATAC	1 cut(s)	687
Bst2BI	CACGAG	1 cut(s)	1410
Bst2UI	CCWGG	2 cut(s)	348, 959
Bst4CI	ACNGT	7 cut(s)	14, 574, 616, 646, 1179, 1346, 1821
BstACI	GRCGYC	2 cut(s)	305, 1299
BstAPI	GCANNNNNTGC	1 cut(s)	210
BstAUI	TGTACA	1 cut(s)	1686
BstBAI	YACGTR	1 cut(s)	628
BstBI	TTCGAA	1 cut(s)	1635
BstC8I	GCNNGC	5 cut(s)	6, 215, 330, 930, 1837
BstDEI	CTNAG	6 cut(s)	671, 820, 856, 869, 1422, 2006
BstEII	GGTNACC	1 cut(s)	1821
BstF5I	GGATG	4 cut(s)	505, 720, 724, 1255
BstFNI	CGCG	2 cut(s)	1339, 1682
BstH2I	RGCGCY	1 cut(s)	68
BstHHI	GCGC	3 cut(s)	67, 1341, 1684
BstMAI	GTCTC	3 cut(s)	1020, 1290, 1893
BstMCI	CGRYCG	1 cut(s)	1294
BstMWI	GCNNNNNNNGC	8 cut(s)	14, 62, 210, 243, 325, 977, 1836, 1970
BstNI	CCWGG	2 cut(s)	348, 959
BstNSI	RCATGY	3 cut(s)	217, 332, 1221
BstPAI	GACNNNNGTC	1 cut(s)	1012
BstPI	GGTNACC	1 cut(s)	1821
BstSCI	CCNGG	2 cut(s)	346, 957
BstSFI	CTRYAG	1 cut(s)	60
BstSLI	GKGCMC	1 cut(s)	1184
BstUI	CGCG	2 cut(s)	1339, 1682
BstV1I	GCAGC	2 cut(s)	770, 1985
BstX2I	RGATCY	1 cut(s)	865
BstYI	RGATCY	1 cut(s)	865
BstZ17I	GTATAC	1 cut(s)	687
BstZI	CGGCCG	1 cut(s)	1291
Bsu15I	ATCGAT	1 cut(s)	207
BsuRI	GGCC	5 cut(s)	446, 980, 1293, 1619, 1867
BsuTUI	ATCGAT	1 cut(s)	207
BtgZI	GCGATG	1 cut(s)	1037
BtsCI	GGATG	4 cut(s)	505, 720, 724, 1255
BtsIMutI	CAGTG	5 cut(s)	600, 642, 1044, 1175, 1342
Cac8I	GCNNGC	5 cut(s)	6, 215, 330, 930, 1837
CaiI	CAGNNNCTG	1 cut(s)	23
CfoI	GCGC	3 cut(s)	67, 1341, 1684
ClaI	ATCGAT	1 cut(s)	207
CseI	GACGC	2 cut(s)	294, 1688
Csp6I	GTAC	2 cut(s)	10, 1687
CviAII	CATG	8 cut(s)	193, 214, 329, 496, 584, 596, 638, 1218
CviQI	GTAC	2 cut(s)	10, 1687
DdeI	CTNAG	6 cut(s)	671, 820, 856, 869, 1422, 2006
EaeI	YGGCCR	3 cut(s)	1291, 1617, 1865
EagI	CGGCCG	1 cut(s)	1291
Ecl136II	GAGCTC	1 cut(s)	353
EclXI	CGGCCG	1 cut(s)	1291
Eco130I	CCWWGG	1 cut(s)	933
Eco24I	GRGCYC	1 cut(s)	355
Eco31I	GGTCTC	1 cut(s)	1020
Eco47III	AGCGCT	1 cut(s)	66
Eco52I	CGGCCG	1 cut(s)	1291
Eco53kI	GAGCTC	1 cut(s)	353
Eco57I	CTGAAG	2 cut(s)	98, 780
Eco88I	CYCGRG	1 cut(s)	262
Eco91I	GGTNACC	1 cut(s)	1821
EcoICRI	GAGCTC	1 cut(s)	353
EcoO65I	GGTNACC	1 cut(s)	1821
EcoRII	CCWGG	2 cut(s)	346, 957
EcoT14I	CCWWGG	1 cut(s)	933
EcoT22I	ATGCAT	1 cut(s)	219
EcoT38I	GRGCYC	1 cut(s)	355
ErhI	CCWWGG	1 cut(s)	933
Esp3I	CGTCTC	1 cut(s)	1290
FaeI	CATG	8 cut(s)	196, 217, 332, 499, 587, 599, 641, 1221
FaqI	GGGAC	5 cut(s)	976, 1020, 1214, 1425, 1780
FatI	CATG	8 cut(s)	192, 213, 328, 495, 583, 595, 637, 1217
FauI	CCCGC	3 cut(s)	881, 1232, 1474
FauNDI	CATATG	1 cut(s)	1353
FbaI	TGATCA	5 cut(s)	25, 1048, 1099, 1150, 1252
FblI	GTMKAC	3 cut(s)	277, 686, 1947
Fnu4HI	GCNGC	5 cut(s)	784, 969, 993, 996, 1974
FokI	GGATG	4 cut(s)	512, 727, 731, 1262
FriOI	GRGCYC	1 cut(s)	355
Fsp4HI	GCNGC	5 cut(s)	784, 969, 993, 996, 1974
FspBI	CTAG	7 cut(s)	45, 188, 546, 690, 1019, 1770, 1827
GlaI	GCGC	3 cut(s)	66, 1340, 1683
GluI	GCNGC	5 cut(s)	784, 969, 993, 996, 1974
GsaI	CCCAGC	3 cut(s)	250, 1007, 1835
GsuI	CTGGAG	2 cut(s)	273, 369
HaeII	RGCGCY	1 cut(s)	68
HaeIII	GGCC	5 cut(s)	446, 980, 1293, 1619, 1867
HapII	CCGG	1 cut(s)	1433
HgaI	GACGC	2 cut(s)	294, 1688
HhaI	GCGC	3 cut(s)	67, 1341, 1684
Hin1I	GRCGYC	2 cut(s)	305, 1299
Hin1II	CATG	8 cut(s)	196, 217, 332, 499, 587, 599, 641, 1221
Hin6I	GCGC	3 cut(s)	65, 1339, 1682
HinP1I	GCGC	3 cut(s)	65, 1339, 1682
HincII	GTYRAC	1 cut(s)	145
HindII	GTYRAC	1 cut(s)	145
HindIII	AAGCTT	1 cut(s)	1837
HinfI	GANTC	8 cut(s)	701, 791, 1061, 1172, 1270, 1424, 1716, 1886
HpaII	CCGG	1 cut(s)	1433
HphI	GGTGA	8 cut(s)	490, 534, 773, 893, 1159, 1385, 1466, 1810
Hpy166II	GTNNAC	8 cut(s)	145, 278, 687, 1182, 1349, 1376, 1664, 1948
Hpy188III	TCNNGA	4 cut(s)	293, 1697, 1843, 1910
Hpy8I	GTNNAC	8 cut(s)	145, 278, 687, 1182, 1349, 1376, 1664, 1948
Hpy99I	CGWCG	6 cut(s)	180, 1304, 1307, 1448, 1451, 1682
HpyAV	CCTTC	7 cut(s)	134, 1252, 1278, 1503, 1522, 1694, 1785
HpyCH4III	ACNGT	7 cut(s)	14, 574, 616, 646, 1179, 1346, 1821
HpyCH4IV	ACGT	6 cut(s)	175, 369, 627, 1299, 1651, 1998
HpyCH4V	TGCA	8 cut(s)	17, 213, 217, 380, 484, 1182, 1221, 1386
HpyF10VI	GCNNNNNNNGC	8 cut(s)	14, 62, 210, 243, 325, 977, 1836, 1970
HpyF3I	CTNAG	6 cut(s)	671, 820, 856, 869, 1422, 2006
HpySE526I	ACGT	6 cut(s)	175, 369, 627, 1299, 1651, 1998
Hsp92I	GRCGYC	2 cut(s)	305, 1299
Hsp92II	CATG	8 cut(s)	196, 217, 332, 499, 587, 599, 641, 1221
HspAI	GCGC	3 cut(s)	65, 1339, 1682
Ksp22I	TGATCA	5 cut(s)	25, 1048, 1099, 1150, 1252
LmnI	GCTCC	4 cut(s)	53, 201, 254, 350
Lsp1109I	GCAGC	2 cut(s)	770, 1985
LweI	GCATC	5 cut(s)	213, 389, 471, 709, 777
MaeI	CTAG	7 cut(s)	45, 188, 546, 690, 1019, 1770, 1827
MaeII	ACGT	6 cut(s)	175, 369, 627, 1299, 1651, 1998
MboII	GAAGA	8 cut(s)	91, 241, 786, 1184, 1198, 1601, 1620, 1638
MfeI	CAATTG	1 cut(s)	1138
MflI	RGATCY	1 cut(s)	865
MhlI	GDGCHC	2 cut(s)	355, 1184
MlsI	TGGCCA	2 cut(s)	1619, 1867
MluCI	AATT	9 cut(s)	136, 232, 521, 549, 1138, 1579, 1779, 1861, 1916
MluNI	TGGCCA	2 cut(s)	1619, 1867
MlyI	GAGTC	2 cut(s)	1433, 1895
MmeI	TCCRAC	2 cut(s)	1429, 1897
Mox20I	TGGCCA	2 cut(s)	1619, 1867
Mph1103I	ATGCAT	1 cut(s)	219
MscI	TGGCCA	2 cut(s)	1619, 1867
MseI	TTAA	1 cut(s)	1860
MslI	CAYNNNNRTG	1 cut(s)	47
Msp20I	TGGCCA	2 cut(s)	1619, 1867
MspA1I	CMGCKG	1 cut(s)	1148
MspI	CCGG	1 cut(s)	1433
MspR9I	CCNGG	2 cut(s)	348, 959
MunI	CAATTG	1 cut(s)	1138
MvaI	CCWGG	2 cut(s)	348, 959
MvnI	CGCG	2 cut(s)	1339, 1682
MwoI	GCNNNNNNNGC	8 cut(s)	14, 62, 210, 243, 325, 977, 1836, 1970
NdeI	CATATG	1 cut(s)	1353
NlaIII	CATG	8 cut(s)	196, 217, 332, 499, 587, 599, 641, 1221
NlaIV	GGNNCC	2 cut(s)	122, 343
NmeAIII	GCCGAG	1 cut(s)	1319
NmuCI	GTSAC	5 cut(s)	598, 623, 640, 653, 1040
NsiI	ATGCAT	1 cut(s)	219
NspI	RCATGY	3 cut(s)	217, 332, 1221
NspV	TTCGAA	1 cut(s)	1635
PaeI	GCATGC	2 cut(s)	217, 332
PcsI	WCGNNNNNNNCGW	1 cut(s)	1296
PfeI	GAWTC	6 cut(s)	701, 791, 1061, 1172, 1270, 1716
Pfl23II	CGTACG	1 cut(s)	9
PflFI	GACNNNGTC	4 cut(s)	174, 596, 638, 1301
PkrI	GCNGC	5 cut(s)	785, 970, 994, 997, 1975
PleI	GAGTC	2 cut(s)	1432, 1894
PpsI	GAGTC	2 cut(s)	1432, 1894
Ppu21I	YACGTR	1 cut(s)	628
PshAI	GACNNNNGTC	1 cut(s)	1012
PsiI	TTATAA	1 cut(s)	519
Psp124BI	GAGCTC	1 cut(s)	355
Psp1406I	AACGTT	1 cut(s)	369
Psp6I	CCWGG	2 cut(s)	346, 957
PspEI	GGTNACC	1 cut(s)	1821
PspFI	CCCAGC	3 cut(s)	246, 1003, 1831
PspGI	CCWGG	2 cut(s)	346, 957
PspLI	CGTACG	1 cut(s)	9
PspN4I	GGNNCC	2 cut(s)	122, 343
PstNI	CAGNNNCTG	1 cut(s)	23
PsuI	RGATCY	1 cut(s)	865
PsyI	GACNNNGTC	4 cut(s)	174, 596, 638, 1301
PvuII	CAGCTG	1 cut(s)	1148
RsaI	GTAC	2 cut(s)	11, 1688
RsaNI	GTAC	2 cut(s)	10, 1687
RseI	CAYNNNNRTG	1 cut(s)	47
SacI	GAGCTC	1 cut(s)	355
SaqAI	TTAA	1 cut(s)	1860
SatI	GCNGC	5 cut(s)	784, 969, 993, 996, 1974
SchI	GAGTC	2 cut(s)	1433, 1895
ScrFI	CCNGG	2 cut(s)	348, 959
SduI	GDGCHC	2 cut(s)	355, 1184
SfaNI	GCATC	5 cut(s)	213, 389, 471, 709, 777
SfcI	CTRYAG	1 cut(s)	60
SfuI	TTCGAA	1 cut(s)	1635
SmiMI	CAYNNNNRTG	1 cut(s)	47
SmlI	CTYRAG	1 cut(s)	1233
SmoI	CTYRAG	1 cut(s)	1233
SpeI	ACTAGT	1 cut(s)	689
SphI	GCATGC	2 cut(s)	217, 332
Sse9I	AATT	9 cut(s)	136, 232, 521, 549, 1138, 1579, 1779, 1861, 1916
SsiI	CCGC	9 cut(s)	888, 968, 971, 992, 995, 1185, 1239, 1481, 1962
SspI	AATATT	1 cut(s)	1570
SspMI	CTAG	7 cut(s)	45, 188, 546, 690, 1019, 1770, 1827
SstI	GAGCTC	1 cut(s)	355
StyD4I	CCNGG	2 cut(s)	346, 957
StyI	CCWWGG	1 cut(s)	933
TaaI	ACNGT	7 cut(s)	14, 574, 616, 646, 1179, 1346, 1821
TaiI	ACGT	6 cut(s)	178, 372, 630, 1302, 1654, 2001
TaqI	TCGA	8 cut(s)	207, 268, 393, 742, 827, 1305, 1635, 1677
TaqII	GACCGA	1 cut(s)	837
TasI	AATT	9 cut(s)	136, 232, 521, 549, 1138, 1579, 1779, 1861, 1916
TatI	WGTACW	1 cut(s)	1686
TauI	GCSGC	3 cut(s)	971, 995, 998
TfiI	GAWTC	6 cut(s)	701, 791, 1061, 1172, 1270, 1716
Tru1I	TTAA	1 cut(s)	1860
Tru9I	TTAA	1 cut(s)	1860
TscAI	CASTG	5 cut(s)	607, 649, 1051, 1182, 1349
TseFI	GTSAC	5 cut(s)	598, 623, 640, 653, 1040
TseI	GCWGC	2 cut(s)	783, 1973
Tsp45I	GTSAC	5 cut(s)	598, 623, 640, 653, 1040
TspDTI	ATGAA	3 cut(s)	51, 1578, 1620
TspGWI	ACGGA	1 cut(s)	962
TspRI	CASTG	5 cut(s)	607, 649, 1051, 1182, 1349
Tth111I	GACNNNGTC	4 cut(s)	174, 596, 638, 1301
VneI	GTGCAC	1 cut(s)	1180
XapI	RAATTY	3 cut(s)	136, 549, 1579
XceI	RCATGY	3 cut(s)	217, 332, 1221
XmiI	GTMKAC	3 cut(s)	277, 686, 1947
XspI	CTAG	7 cut(s)	45, 188, 546, 690, 1019, 1770, 1827
ZraI	GACGTC	1 cut(s)	1300
Zsp2I	ATGCAT	1 cut(s)	219

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.