E3 ubiquitin-protein ligase
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD10G1023200.v1.1 |
| pyrus_communis | pycom15g27830 |
| rosa_chinensis | RchiOBHm_Chr1g0317751 RchiOBHm_Chr1g0317841 RchiOBHm_Chr3g0492291 |
| rosa_laevigata | RLG00000030580 RLG00000030581 RLG00000030583 RLG00000030585 |
| rosa_multiflora | Rmu_co8140940.1_g000001 Rmu_sc0000654.1_g000001 Rmu_sc0006964.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00113770 |
| rosa_rugosa | Rorug01G0017100 Rorug01G0017600 Rorug01G0018000 |
| rosa_samantha | Rh1BG025500 Rh1CG026600 Rh1DG018400 Rh1DG041800 Rh1DG042000 Rh1DG042200 Rh1DG042900 Rh1DG043700 Rh2AG344000 Rh2BG352500 Rh2CG331200 Rh2DG370500 |
| rosa_wichuraiana | Rw1G001560 Rw1G002150 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 146 |
| AciI | CCGC | 3 cut(s) | 68, 144, 146 |
| AclWI | GGATC | 1 cut(s) | 4 |
| AcoI | YGGCCR | 2 cut(s) | 120, 138 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 118 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 30, 62 |
| AluBI | AGCT | 1 cut(s) | 42 |
| AluI | AGCT | 1 cut(s) | 42 |
| Alw26I | GTCTC | 1 cut(s) | 65 |
| AlwI | GGATC | 1 cut(s) | 4 |
| AoxI | GGCC | 2 cut(s) | 120, 138 |
| AsuHPI | GGTGA | 1 cut(s) | 70 |
| BalI | TGGCCA | 1 cut(s) | 122 |
| BccI | CCATC | 1 cut(s) | 89 |
| BcoDI | GTCTC | 1 cut(s) | 65 |
| BfaI | CTAG | 2 cut(s) | 98, 157 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 146 |
| BisI | GCNGC | 1 cut(s) | 147 |
| BlsI | GCNGC | 1 cut(s) | 148 |
| BsaI | GGTCTC | 1 cut(s) | 65 |
| BsaJI | CCNNGG | 2 cut(s) | 123, 144 |
| BsaWI | WCCGGW | 1 cut(s) | 115 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 118 |
| Bse118I | RCCGGY | 1 cut(s) | 64 |
| BseDI | CCNNGG | 2 cut(s) | 123, 144 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 118 |
| Bsh1236I | CGCG | 1 cut(s) | 146 |
| BshFI | GGCC | 2 cut(s) | 122, 140 |
| BsiSI | CCGG | 2 cut(s) | 65, 116 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 118 |
| BsmAI | GTCTC | 1 cut(s) | 65 |
| BsnI | GGCC | 2 cut(s) | 122, 140 |
| Bso31I | GGTCTC | 1 cut(s) | 65 |
| Bsp143I | GATC | 1 cut(s) | 9 |
| BspACI | CCGC | 3 cut(s) | 68, 144, 146 |
| BspANI | GGCC | 2 cut(s) | 122, 140 |
| BspFNI | CGCG | 1 cut(s) | 146 |
| BspPI | GGATC | 1 cut(s) | 4 |
| BspTNI | GGTCTC | 1 cut(s) | 65 |
| BsrFI | RCCGGY | 1 cut(s) | 64 |
| BssAI | RCCGGY | 1 cut(s) | 64 |
| BssECI | CCNNGG | 2 cut(s) | 123, 144 |
| BssMI | GATC | 1 cut(s) | 9 |
| BssT1I | CCWWGG | 1 cut(s) | 123 |
| Bst4CI | ACNGT | 1 cut(s) | 76 |
| BstC8I | GCNNGC | 1 cut(s) | 88 |
| BstDSI | CCRYGG | 1 cut(s) | 144 |
| BstFNI | CGCG | 1 cut(s) | 146 |
| BstKTI | GATC | 1 cut(s) | 12 |
| BstMAI | GTCTC | 1 cut(s) | 65 |
| BstMBI | GATC | 1 cut(s) | 9 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 146 |
| BstUI | CGCG | 1 cut(s) | 146 |
| BstX2I | RGATCY | 1 cut(s) | 9 |
| BstYI | RGATCY | 1 cut(s) | 9 |
| BsuRI | GGCC | 2 cut(s) | 122, 140 |
| BtgI | CCRYGG | 1 cut(s) | 144 |
| BtgZI | GCGATG | 1 cut(s) | 67 |
| Cac8I | GCNNGC | 1 cut(s) | 88 |
| Cfr10I | RCCGGY | 1 cut(s) | 64 |
| Cfr42I | CCGCGG | 1 cut(s) | 147 |
| CviJI | RGCY | 4 cut(s) | 42, 122, 140, 149 |
| CviKI_1 | RGCY | 4 cut(s) | 42, 122, 140, 149 |
| DpnI | GATC | 1 cut(s) | 11 |
| DpnII | GATC | 1 cut(s) | 9 |
| EaeI | YGGCCR | 2 cut(s) | 120, 138 |
| EciI | GGCGGA | 1 cut(s) | 83 |
| Eco130I | CCWWGG | 1 cut(s) | 123 |
| Eco31I | GGTCTC | 1 cut(s) | 65 |
| EcoT14I | CCWWGG | 1 cut(s) | 123 |
| ErhI | CCWWGG | 1 cut(s) | 123 |
| Fnu4HI | GCNGC | 1 cut(s) | 147 |
| Fsp4HI | GCNGC | 1 cut(s) | 147 |
| FspBI | CTAG | 2 cut(s) | 98, 157 |
| GluI | GCNGC | 1 cut(s) | 147 |
| HaeIII | GGCC | 2 cut(s) | 122, 140 |
| HapII | CCGG | 2 cut(s) | 65, 116 |
| HpaII | CCGG | 2 cut(s) | 65, 116 |
| HphI | GGTGA | 1 cut(s) | 70 |
| Hpy188I | TCNGA | 2 cut(s) | 9, 14 |
| HpyAV | CCTTC | 1 cut(s) | 122 |
| HpyCH4III | ACNGT | 1 cut(s) | 76 |
| HpyCH4V | TGCA | 1 cut(s) | 29 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 146 |
| KspI | CCGCGG | 1 cut(s) | 147 |
| Kzo9I | GATC | 1 cut(s) | 9 |
| LpnPI | CCDG | 2 cut(s) | 78, 129 |
| MaeI | CTAG | 2 cut(s) | 98, 157 |
| MaeIII | GTNAC | 1 cut(s) | 76 |
| MalI | GATC | 1 cut(s) | 11 |
| MboI | GATC | 1 cut(s) | 9 |
| MflI | RGATCY | 1 cut(s) | 9 |
| MlsI | TGGCCA | 1 cut(s) | 122 |
| MluNI | TGGCCA | 1 cut(s) | 122 |
| MmeI | TCCRAC | 1 cut(s) | 37 |
| MnlI | CCTC | 2 cut(s) | 102, 113 |
| Mox20I | TGGCCA | 1 cut(s) | 122 |
| MscI | TGGCCA | 1 cut(s) | 122 |
| Msp20I | TGGCCA | 1 cut(s) | 122 |
| MspA1I | CMGCKG | 1 cut(s) | 146 |
| MspI | CCGG | 2 cut(s) | 65, 116 |
| MvnI | CGCG | 1 cut(s) | 146 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 146 |
| NdeII | GATC | 1 cut(s) | 9 |
| NmuCI | GTSAC | 1 cut(s) | 76 |
| PkrI | GCNGC | 1 cut(s) | 148 |
| PsuI | RGATCY | 1 cut(s) | 9 |
| SacII | CCGCGG | 1 cut(s) | 147 |
| SatI | GCNGC | 1 cut(s) | 147 |
| Sau3AI | GATC | 1 cut(s) | 9 |
| SetI | ASST | 2 cut(s) | 44, 114 |
| Sfr303I | CCGCGG | 1 cut(s) | 147 |
| SgeI | CNNG | 8 cut(s) | 59, 77, 99, 105, 110, 116, 128, 136 |
| SgrBI | CCGCGG | 1 cut(s) | 147 |
| SsiI | CCGC | 3 cut(s) | 68, 144, 146 |
| SspMI | CTAG | 2 cut(s) | 98, 157 |
| StyI | CCWWGG | 1 cut(s) | 123 |
| TaaI | ACNGT | 1 cut(s) | 76 |
| TauI | GCSGC | 1 cut(s) | 149 |
| TseFI | GTSAC | 1 cut(s) | 76 |
| Tsp45I | GTSAC | 1 cut(s) | 76 |
| XspI | CTAG | 2 cut(s) | 98, 157 |