60S ribosomal protein
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD10G1023200.v1.1 |
| pyrus_communis | pycom15g27830 |
| rosa_chinensis | RchiOBHm_Chr1g0317751 RchiOBHm_Chr1g0317841 RchiOBHm_Chr3g0492291 |
| rosa_laevigata | RLG00000030580 RLG00000030581 RLG00000030583 RLG00000030585 |
| rosa_multiflora | Rmu_co8140940.1_g000001 Rmu_sc0000654.1_g000001 Rmu_sc0006964.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00113770 |
| rosa_rugosa | Rorug01G0017100 Rorug01G0017600 Rorug01G0018000 |
| rosa_samantha | Rh1BG025500 Rh1CG026600 Rh1DG018400 Rh1DG041800 Rh1DG042000 Rh1DG042200 Rh1DG042900 Rh1DG043700 Rh2AG344000 Rh2BG352500 Rh2CG331200 Rh2DG370500 |
| rosa_wichuraiana | Rw1G001560 Rw1G002150 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 390 |
| AciI | CCGC | 1 cut(s) | 468 |
| AcsI | RAATTY | 2 cut(s) | 349, 400 |
| AfaI | GTAC | 1 cut(s) | 49 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 363 |
| AgsI | TTSAA | 5 cut(s) | 105, 170, 219, 405, 517 |
| AjnI | CCWGG | 2 cut(s) | 331, 481 |
| AluBI | AGCT | 4 cut(s) | 275, 323, 544, 555 |
| AluI | AGCT | 4 cut(s) | 275, 323, 544, 555 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 16 |
| ApeKI | GCWGC | 1 cut(s) | 272 |
| ApoI | RAATTY | 2 cut(s) | 349, 400 |
| AspLEI | GCGC | 2 cut(s) | 162, 391 |
| BbvI | GCAGC | 1 cut(s) | 284 |
| BccI | CCATC | 1 cut(s) | 241 |
| BceAI | ACGGC | 1 cut(s) | 242 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 295, 329 |
| BciT130I | CCWGG | 2 cut(s) | 333, 483 |
| BclI | TGATCA | 1 cut(s) | 495 |
| BfaI | CTAG | 2 cut(s) | 29, 552 |
| BisI | GCNGC | 1 cut(s) | 273 |
| BlsI | GCNGC | 1 cut(s) | 274 |
| Bme1390I | CCNGG | 2 cut(s) | 333, 483 |
| BmrFI | CCNGG | 2 cut(s) | 333, 483 |
| BmsI | GCATC | 3 cut(s) | 22, 91, 120 |
| BsaBI | GATNNNNATC | 1 cut(s) | 119 |
| BsaJI | CCNNGG | 2 cut(s) | 301, 481 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 363 |
| Bse1I | ACTGG | 1 cut(s) | 259 |
| Bse8I | GATNNNNATC | 1 cut(s) | 119 |
| BseBI | CCWGG | 2 cut(s) | 333, 483 |
| BseDI | CCNNGG | 2 cut(s) | 301, 481 |
| BseGI | GGATG | 3 cut(s) | 160, 233, 297 |
| BseJI | GATNNNNATC | 1 cut(s) | 119 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 363 |
| BseNI | ACTGG | 1 cut(s) | 259 |
| BseXI | GCAGC | 1 cut(s) | 284 |
| BsgI | GTGCAG | 1 cut(s) | 465 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 363 |
| Bsp143I | GATC | 2 cut(s) | 428, 495 |
| BspACI | CCGC | 1 cut(s) | 468 |
| BsrI | ACTGG | 1 cut(s) | 259 |
| BssECI | CCNNGG | 2 cut(s) | 301, 481 |
| BssMI | GATC | 2 cut(s) | 428, 495 |
| Bst2UI | CCWGG | 2 cut(s) | 333, 483 |
| Bst4CI | ACNGT | 4 cut(s) | 187, 204, 343, 490 |
| Bst6I | CTCTTC | 1 cut(s) | 553 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 353 |
| BstC8I | GCNNGC | 2 cut(s) | 472, 557 |
| BstDEI | CTNAG | 1 cut(s) | 419 |
| BstF5I | GGATG | 3 cut(s) | 160, 233, 297 |
| BstHHI | GCGC | 2 cut(s) | 162, 391 |
| BstKTI | GATC | 2 cut(s) | 431, 498 |
| BstMBI | GATC | 2 cut(s) | 428, 495 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 353 |
| BstNI | CCWGG | 2 cut(s) | 333, 483 |
| BstSCI | CCNGG | 2 cut(s) | 331, 481 |
| BstV1I | GCAGC | 1 cut(s) | 284 |
| BtsCI | GGATG | 3 cut(s) | 160, 233, 297 |
| BtsIMutI | CAGTG | 1 cut(s) | 339 |
| Cac8I | GCNNGC | 2 cut(s) | 472, 557 |
| CaiI | CAGNNNCTG | 1 cut(s) | 16 |
| CfoI | GCGC | 2 cut(s) | 162, 391 |
| Csp6I | GTAC | 1 cut(s) | 48 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 185, 220 |
| CviJI | RGCY | 6 cut(s) | 32, 229, 275, 323, 544, 555 |
| CviKI_1 | RGCY | 6 cut(s) | 32, 229, 275, 323, 544, 555 |
| CviQI | GTAC | 1 cut(s) | 48 |
| DdeI | CTNAG | 1 cut(s) | 419 |
| DpnI | GATC | 2 cut(s) | 430, 497 |
| DpnII | GATC | 2 cut(s) | 428, 495 |
| DraI | TTTAAA | 1 cut(s) | 63 |
| Eam1104I | CTCTTC | 1 cut(s) | 553 |
| EarI | CTCTTC | 1 cut(s) | 553 |
| Eco32I | GATATC | 1 cut(s) | 410 |
| EcoRI | GAATTC | 1 cut(s) | 400 |
| EcoRII | CCWGG | 2 cut(s) | 331, 481 |
| EcoRV | GATATC | 1 cut(s) | 410 |
| FaiI | YATR | 7 cut(s) | 96, 137, 190, 256, 267, 375, 461 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 515, 547 |
| FbaI | TGATCA | 1 cut(s) | 495 |
| Fnu4HI | GCNGC | 1 cut(s) | 273 |
| FokI | GGATG | 3 cut(s) | 167, 220, 284 |
| Fsp4HI | GCNGC | 1 cut(s) | 273 |
| FspAI | RTGCGCAY | 1 cut(s) | 390 |
| FspBI | CTAG | 2 cut(s) | 29, 552 |
| FspI | TGCGCA | 1 cut(s) | 390 |
| GlaI | GCGC | 2 cut(s) | 161, 390 |
| GluI | GCNGC | 1 cut(s) | 273 |
| HhaI | GCGC | 2 cut(s) | 162, 391 |
| Hin6I | GCGC | 2 cut(s) | 160, 389 |
| HinP1I | GCGC | 2 cut(s) | 160, 389 |
| HindIII | AAGCTT | 1 cut(s) | 321 |
| HinfI | GANTC | 1 cut(s) | 336 |
| Hpy188I | TCNGA | 1 cut(s) | 147 |
| Hpy188III | TCNNGA | 3 cut(s) | 17, 405, 432 |
| HpyAV | CCTTC | 3 cut(s) | 32, 304, 504 |
| HpyCH4III | ACNGT | 4 cut(s) | 187, 204, 343, 490 |
| HpyCH4IV | ACGT | 1 cut(s) | 442 |
| HpyCH4V | TGCA | 3 cut(s) | 119, 347, 446 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 353 |
| HpyF3I | CTNAG | 1 cut(s) | 419 |
| HpySE526I | ACGT | 1 cut(s) | 442 |
| HspAI | GCGC | 2 cut(s) | 160, 389 |
| Ksp22I | TGATCA | 1 cut(s) | 495 |
| Kzo9I | GATC | 2 cut(s) | 428, 495 |
| LmnI | GCTCC | 1 cut(s) | 79 |
| LpnPI | CCDG | 8 cut(s) | 2, 272, 318, 345, 348, 371, 468, 495 |
| Lsp1109I | GCAGC | 1 cut(s) | 284 |
| LweI | GCATC | 3 cut(s) | 22, 91, 120 |
| MaeI | CTAG | 2 cut(s) | 29, 552 |
| MaeII | ACGT | 1 cut(s) | 442 |
| MaeIII | GTNAC | 1 cut(s) | 380 |
| MalI | GATC | 2 cut(s) | 430, 497 |
| MboI | GATC | 2 cut(s) | 428, 495 |
| MboII | GAAGA | 1 cut(s) | 540 |
| MluCI | AATT | 5 cut(s) | 21, 89, 176, 349, 400 |
| MmeI | TCCRAC | 1 cut(s) | 437 |
| MnlI | CCTC | 3 cut(s) | 145, 311, 531 |
| MseI | TTAA | 2 cut(s) | 62, 571 |
| MslI | CAYNNNNRTG | 1 cut(s) | 128 |
| MspR9I | CCNGG | 2 cut(s) | 333, 483 |
| MvaI | CCWGG | 2 cut(s) | 333, 483 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 353 |
| NdeII | GATC | 2 cut(s) | 428, 495 |
| NmeAIII | GCCGAG | 1 cut(s) | 282 |
| NsbI | TGCGCA | 1 cut(s) | 390 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 439 |
| PfeI | GAWTC | 1 cut(s) | 336 |
| PfoI | TCCNGGA | 1 cut(s) | 331 |
| PkrI | GCNGC | 1 cut(s) | 274 |
| Psp6I | CCWGG | 2 cut(s) | 331, 481 |
| PspGI | CCWGG | 2 cut(s) | 331, 481 |
| PstNI | CAGNNNCTG | 1 cut(s) | 16 |
| RsaI | GTAC | 1 cut(s) | 49 |
| RsaNI | GTAC | 1 cut(s) | 48 |
| RseI | CAYNNNNRTG | 1 cut(s) | 128 |
| SaqAI | TTAA | 2 cut(s) | 62, 571 |
| SatI | GCNGC | 1 cut(s) | 273 |
| Sau3AI | GATC | 2 cut(s) | 428, 495 |
| ScrFI | CCNGG | 2 cut(s) | 333, 483 |
| SetI | ASST | 9 cut(s) | 30, 43, 277, 325, 445, 460, 515, 546, 557 |
| SfaNI | GCATC | 3 cut(s) | 22, 91, 120 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 128 |
| Sse9I | AATT | 5 cut(s) | 21, 89, 176, 349, 400 |
| SsiI | CCGC | 1 cut(s) | 468 |
| SspMI | CTAG | 2 cut(s) | 29, 552 |
| StyD4I | CCNGG | 2 cut(s) | 331, 481 |
| TaaI | ACNGT | 4 cut(s) | 187, 204, 343, 490 |
| TaiI | ACGT | 1 cut(s) | 445 |
| TaqI | TCGA | 1 cut(s) | 433 |
| TasI | AATT | 5 cut(s) | 21, 89, 176, 349, 400 |
| TatI | WGTACW | 1 cut(s) | 47 |
| TfiI | GAWTC | 1 cut(s) | 336 |
| Tru1I | TTAA | 2 cut(s) | 62, 571 |
| Tru9I | TTAA | 2 cut(s) | 62, 571 |
| TscAI | CASTG | 1 cut(s) | 346 |
| TseI | GCWGC | 1 cut(s) | 272 |
| TspDTI | ATGAA | 3 cut(s) | 17, 286, 384 |
| TspRI | CASTG | 1 cut(s) | 346 |
| XapI | RAATTY | 2 cut(s) | 349, 400 |
| XspI | CTAG | 2 cut(s) | 29, 552 |