RchiOBHm_Chr4g0392531

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Reverse (-)
8023190 .. 8024793
1604 bp
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UTR
Exon/CDS
Intron
PRQ36526

Sequence Viewer

Length: 126 bp
ATGCCAGTTATTTTGGGTATGATCTTGCATGCAGACTCTTACTTGATCTTCTGGGTATGGGACACTTTGACATCACATCGCAGAGTAGCAGCATTGAATCCTTTGCTCAAAGGATGCTTTTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

41

Amino Acids

4.7

Weight (kDa)

7.86

Isoelectric Point (pI)

40.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 1 cut(s) 97
ApeKI GCWGC 1 cut(s) 89
BbvI GCAGC 1 cut(s) 101
BisI GCNGC 1 cut(s) 90
BlsI GCNGC 1 cut(s) 91
BmsI GCATC 1 cut(s) 104
Bse1I ACTGG 1 cut(s) 5
BseGI GGATG 1 cut(s) 119
BseNI ACTGG 1 cut(s) 5
BseXI GCAGC 1 cut(s) 101
BslFI GGGAC 1 cut(s) 74
BsmFI GGGAC 1 cut(s) 74
Bsp143I GATC 2 cut(s) 21, 45
BsrI ACTGG 1 cut(s) 5
BssMI GATC 2 cut(s) 21, 45
BstC8I GCNNGC 1 cut(s) 30
BstF5I GGATG 1 cut(s) 119
BstKTI GATC 2 cut(s) 24, 48
BstMBI GATC 2 cut(s) 21, 45
BstNSI RCATGY 1 cut(s) 32
BstV1I GCAGC 1 cut(s) 101
BtgZI GCGATG 1 cut(s) 62
BtsCI GGATG 1 cut(s) 119
Cac8I GCNNGC 1 cut(s) 30
CviAII CATG 1 cut(s) 29
DpnI GATC 2 cut(s) 23, 47
DpnII GATC 2 cut(s) 21, 45
FaeI CATG 1 cut(s) 32
FaiI YATR 3 cut(s) 20, 30, 58
FaqI GGGAC 1 cut(s) 74
FatI CATG 1 cut(s) 28
Fnu4HI GCNGC 1 cut(s) 90
Fsp4HI GCNGC 1 cut(s) 90
FspEI CC 7 cut(s) 18, 37, 38, 43, 44, 96, 114
GluI GCNGC 1 cut(s) 90
Hin1II CATG 1 cut(s) 32
HinfI GANTC 2 cut(s) 35, 97
HpyCH4V TGCA 2 cut(s) 28, 32
Hsp92II CATG 1 cut(s) 32
Kzo9I GATC 2 cut(s) 21, 45
LpnPI CCDG 2 cut(s) 18, 37
Lsp1109I GCAGC 1 cut(s) 101
LweI GCATC 1 cut(s) 104
MalI GATC 2 cut(s) 23, 47
MboI GATC 2 cut(s) 21, 45
MboII GAAGA 1 cut(s) 40
MlyI GAGTC 1 cut(s) 29
MseI TTAA 1 cut(s) 124
NdeII GATC 2 cut(s) 21, 45
NlaIII CATG 1 cut(s) 32
NspI RCATGY 1 cut(s) 32
PaeI GCATGC 1 cut(s) 32
PfeI GAWTC 1 cut(s) 97
PkrI GCNGC 1 cut(s) 91
PleI GAGTC 1 cut(s) 29
PpsI GAGTC 1 cut(s) 29
SaqAI TTAA 1 cut(s) 124
SatI GCNGC 1 cut(s) 90
Sau3AI GATC 2 cut(s) 21, 45
SchI GAGTC 1 cut(s) 29
SfaNI GCATC 1 cut(s) 104
SgeI CNNG 5 cut(s) 17, 37, 41, 55, 64
SphI GCATGC 1 cut(s) 32
TfiI GAWTC 1 cut(s) 97
Tru1I TTAA 1 cut(s) 124
Tru9I TTAA 1 cut(s) 124
TseI GCWGC 1 cut(s) 89
XceI RCATGY 1 cut(s) 32
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.