Rh3CG344300

Phosphatidylinositol 4-kinase gamma 2-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
OG0003961
Physical Location & Seq
Forward (+)
38892061 .. 38899862
7802 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG344300.1

Sequence Viewer

Length: 972 bp
ATGCCATTATTTGCTTCTAATGGTTGCAATGGTACATATTTCCTAAGAGACAGGTTTGGAGATGTTGTTGGTGTCTTCAAACCCAGAGATGAGGAGTATGGAGCAATAAATAACCCCAGGGAAAAGTATTCGCTACCGGATGATTTGAAGAAAGTGGTGGAGGTCGGAGGATGGGCTGAAAGGGAAGTGGCAGCTTATCTCTTGGATCATGGGTTTGCTGATGTTCCTTTGACACTGATGGTTAAGTGTTTTCAAAAGTCTGTTGATGATTCTTCACAAGCAAATGAGAAGGTTGGTTCACTACAAAAGTATATGAAGCACGAAGGAAGTTTAGATGAGTTTGGTTGTGGCTGTTTTTCGACTCATGATGTGCATAAGTTATCAGTTTTGGATGTTAGAATTGCTAACATAGATAGACACATGGCAAATATGTTGGTTGCCCATGATGGCAAACTAATTCCTATTGATCATGGCTGCTGCTTGCCAACCAATCCTAATTTTGAAGCAGGCTGTAAGTTTGAATGGTTAGAATGGCCTCAGGCACAATCCTCATATTCAACTGTTGTTGTTGACGACATCAGAGATCTTGAGGCAAAAAAAGATATTGCACTGTTAAAGGAGAACCGAATTGACCTTATGAGGTCTGAAATCACTCTAAAGATCTGTACGATGCTTTTGAAGAAAGGGGTGGAAAGCAGCCTTACTCCATATGAAATTGGGTACATGATGATGAGGAAGAATGAGCATGACAAATCTTCTCTTGAAAAGTTGATAGAAGAGGCACGAGAAGCTCATGGAAATGATGGTTTGTTGTTGGATCATGTATTATCCATGATTGATGATCTCGGTTCCGCTGGCCGCAGACCTCGAGCAAGGGCAAGGATGAATGGACTATCACTTCTTCATGATGCCACTGCTGTTATTTTCATCAATGTAACGTGGGCATTGGCAGCTGCTTCTGGGAAGAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0006950 GO:0006970 GO:0008150 GO:0009628 GO:0009651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050896
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PI3_PI4_kinase ubiquitin

Protein Analysis

323

Amino Acids

36.1

Weight (kDa)

5.8

Isoelectric Point (pI)

21.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PI3_PI4_kinase PF00454 10 - 238 3.4e-25 Phosphatidylinositol 3- and 4-kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 852, 859
AclWI GGATC 2 cut(s) 213, 825
AcoI YGGCCR 1 cut(s) 856
AfaI GTAC 3 cut(s) 34, 667, 722
AgsI TTSAA 8 cut(s) 79, 148, 254, 503, 521, 558, 679, 764
AjnI CCWGG 1 cut(s) 116
AluBI AGCT 3 cut(s) 194, 791, 953
AluI AGCT 3 cut(s) 194, 791, 953
Alw26I GTCTC 1 cut(s) 42
AlwI GGATC 2 cut(s) 213, 825
Ama87I CYCGRG 1 cut(s) 867
AoxI GGCC 2 cut(s) 533, 856
ApeKI GCWGC 6 cut(s) 191, 474, 477, 696, 950, 953
AvaI CYCGRG 1 cut(s) 867
AxyI CCTNAGG 1 cut(s) 537
BauI CACGAG 1 cut(s) 783
BbsI GAAGAC 1 cut(s) 67
BbvI GCAGC 6 cut(s) 203, 461, 464, 708, 940, 962
BccI CCATC 4 cut(s) 165, 232, 440, 797
BciT130I CCWGG 1 cut(s) 118
BclI TGATCA 1 cut(s) 466
BcoDI GTCTC 1 cut(s) 42
BglII AGATCT 2 cut(s) 583, 660
BisI GCNGC 7 cut(s) 192, 475, 478, 697, 859, 951, 954
BlsI GCNGC 7 cut(s) 193, 476, 479, 698, 860, 952, 955
Bme1390I CCNGG 1 cut(s) 118
BmeT110I CYCGRG 1 cut(s) 867
BmiI GGNNCC 1 cut(s) 850
BmrFI CCNGG 1 cut(s) 118
BmsI GCATC 2 cut(s) 660, 898
BpiI GAAGAC 1 cut(s) 67
BpuEI CTTGAG 1 cut(s) 608
BsaJI CCNNGG 2 cut(s) 116, 117
BsaWI WCCGGW 1 cut(s) 136
BsaXI ACNNNNNCTCC 2 cut(s) 51, 81
Bse21I CCTNAGG 1 cut(s) 537
Bse3DI GCAATG 1 cut(s) 34
BseBI CCWGG 1 cut(s) 118
BseDI CCNNGG 2 cut(s) 116, 117
BseGI GGATG 4 cut(s) 145, 176, 397, 888
BseMI GCAATG 1 cut(s) 34
BseMII CTCAG 1 cut(s) 551
BseRI GAGGAG 1 cut(s) 107
BseXI GCAGC 6 cut(s) 203, 461, 464, 708, 940, 962
BshFI GGCC 2 cut(s) 535, 858
BsiHKCI CYCGRG 1 cut(s) 867
BsiSI CCGG 1 cut(s) 137
BsmAI GTCTC 1 cut(s) 42
BsnI GGCC 2 cut(s) 535, 858
BsoBI CYCGRG 1 cut(s) 867
Bsp143I GATC 6 cut(s) 205, 466, 583, 660, 817, 841
BspACI CCGC 2 cut(s) 852, 859
BspANI GGCC 2 cut(s) 535, 858
BspCNI CTCAG 1 cut(s) 550
BspHI TCATGA 2 cut(s) 364, 904
BspLI GGNNCC 1 cut(s) 850
BspPI GGATC 2 cut(s) 213, 825
BsrDI GCAATG 1 cut(s) 34
BssECI CCNNGG 2 cut(s) 116, 117
BssMI GATC 6 cut(s) 205, 466, 583, 660, 817, 841
BssSI CACGAG 1 cut(s) 783
Bst2BI CACGAG 1 cut(s) 783
Bst2UI CCWGG 1 cut(s) 118
Bst4CI ACNGT 2 cut(s) 562, 612
Bst6I CTCTTC 1 cut(s) 771
BstC8I GCNNGC 3 cut(s) 482, 508, 856
BstDEI CTNAG 2 cut(s) 44, 537
BstF5I GGATG 4 cut(s) 145, 176, 397, 888
BstKTI GATC 6 cut(s) 208, 469, 586, 663, 820, 844
BstMAI GTCTC 1 cut(s) 42
BstMBI GATC 6 cut(s) 205, 466, 583, 660, 817, 841
BstMWI GCNNNNNNNGC 2 cut(s) 788, 950
BstNI CCWGG 1 cut(s) 118
BstSCI CCNGG 1 cut(s) 116
BstV1I GCAGC 6 cut(s) 203, 461, 464, 708, 940, 962
BstV2I GAAGAC 1 cut(s) 67
BstX2I RGATCY 2 cut(s) 583, 660
BstYI RGATCY 2 cut(s) 583, 660
Bsu36I CCTNAGG 1 cut(s) 537
BsuRI GGCC 2 cut(s) 535, 858
BtsCI GGATG 4 cut(s) 145, 176, 397, 888
BtsI GCAGTG 1 cut(s) 912
BtsIMutI CAGTG 3 cut(s) 233, 608, 912
Cac8I GCNNGC 3 cut(s) 482, 508, 856
CciI TCATGA 2 cut(s) 364, 904
Csp6I GTAC 3 cut(s) 33, 666, 721
CviQI GTAC 3 cut(s) 33, 666, 721
DdeI CTNAG 2 cut(s) 44, 537
DpnI GATC 6 cut(s) 207, 468, 585, 662, 819, 843
DpnII GATC 6 cut(s) 205, 466, 583, 660, 817, 841
EaeI YGGCCR 1 cut(s) 856
Eam1104I CTCTTC 1 cut(s) 771
EarI CTCTTC 1 cut(s) 771
Eco81I CCTNAGG 1 cut(s) 537
Eco88I CYCGRG 1 cut(s) 867
EcoRII CCWGG 1 cut(s) 116
FauNDI CATATG 1 cut(s) 709
FbaI TGATCA 1 cut(s) 466
Fnu4HI GCNGC 7 cut(s) 192, 475, 478, 697, 859, 951, 954
FokI GGATG 4 cut(s) 152, 183, 404, 895
Fsp4HI GCNGC 7 cut(s) 192, 475, 478, 697, 859, 951, 954
GluI GCNGC 7 cut(s) 192, 475, 478, 697, 859, 951, 954
HaeIII GGCC 2 cut(s) 535, 858
HapII CCGG 1 cut(s) 137
HincII GTYRAC 1 cut(s) 571
HindII GTYRAC 1 cut(s) 571
HinfI GANTC 2 cut(s) 269, 361
HpaII CCGG 1 cut(s) 137
Hpy166II GTNNAC 2 cut(s) 299, 571
Hpy188I TCNGA 3 cut(s) 167, 581, 646
Hpy188III TCNNGA 4 cut(s) 365, 587, 761, 905
Hpy8I GTNNAC 2 cut(s) 299, 571
HpyAV CCTTC 2 cut(s) 283, 317
HpyCH4III ACNGT 2 cut(s) 562, 612
HpyCH4IV ACGT 1 cut(s) 938
HpyCH4V TGCA 3 cut(s) 27, 373, 608
HpyF10VI GCNNNNNNNGC 2 cut(s) 788, 950
HpyF3I CTNAG 2 cut(s) 44, 537
HpySE526I ACGT 1 cut(s) 938
Ksp22I TGATCA 1 cut(s) 466
Kzo9I GATC 6 cut(s) 205, 466, 583, 660, 817, 841
LmnI GCTCC 1 cut(s) 101
LpnPI CCDG 9 cut(s) 37, 97, 103, 130, 150, 492, 524, 840, 945
Lsp1109I GCAGC 6 cut(s) 203, 461, 464, 708, 940, 962
LweI GCATC 2 cut(s) 660, 898
MaeII ACGT 1 cut(s) 938
MaeIII GTNAC 1 cut(s) 934
MalI GATC 6 cut(s) 207, 468, 585, 662, 819, 843
MboI GATC 6 cut(s) 205, 466, 583, 660, 817, 841
MboII GAAGA 8 cut(s) 67, 160, 264, 691, 747, 748, 788, 893
MflI RGATCY 2 cut(s) 583, 660
MluCI AATT 5 cut(s) 399, 456, 496, 627, 714
MlyI GAGTC 1 cut(s) 355
MmeI TCCRAC 2 cut(s) 145, 795
MseI TTAA 2 cut(s) 243, 614
MslI CAYNNNNRTG 2 cut(s) 728, 798
MspA1I CMGCKG 2 cut(s) 854, 953
MspI CCGG 1 cut(s) 137
MspR9I CCNGG 1 cut(s) 118
MvaI CCWGG 1 cut(s) 118
MwoI GCNNNNNNNGC 2 cut(s) 788, 950
NdeI CATATG 1 cut(s) 709
NdeII GATC 6 cut(s) 205, 466, 583, 660, 817, 841
NlaIV GGNNCC 1 cut(s) 850
PaeR7I CTCGAG 1 cut(s) 867
PagI TCATGA 2 cut(s) 364, 904
PasI CCCWGGG 1 cut(s) 117
PfeI GAWTC 1 cut(s) 269
PkrI GCNGC 7 cut(s) 193, 476, 479, 698, 860, 952, 955
PleI GAGTC 1 cut(s) 355
PpsI GAGTC 1 cut(s) 355
Psp6I CCWGG 1 cut(s) 116
PspGI CCWGG 1 cut(s) 116
PspN4I GGNNCC 1 cut(s) 850
PspXI VCTCGAGB 1 cut(s) 867
PsuI RGATCY 2 cut(s) 583, 660
PvuII CAGCTG 1 cut(s) 953
RsaI GTAC 3 cut(s) 34, 667, 722
RsaNI GTAC 3 cut(s) 33, 666, 721
RseI CAYNNNNRTG 2 cut(s) 728, 798
SaqAI TTAA 2 cut(s) 243, 614
SatI GCNGC 7 cut(s) 192, 475, 478, 697, 859, 951, 954
Sau3AI GATC 6 cut(s) 205, 466, 583, 660, 817, 841
SchI GAGTC 1 cut(s) 355
ScrFI CCNGG 1 cut(s) 118
SfaNI GCATC 2 cut(s) 660, 898
Sfr274I CTCGAG 1 cut(s) 867
SlaI CTCGAG 1 cut(s) 867
SmiMI CAYNNNNRTG 2 cut(s) 728, 798
SmlI CTYRAG 2 cut(s) 587, 867
SmoI CTYRAG 2 cut(s) 587, 867
Sse9I AATT 5 cut(s) 399, 456, 496, 627, 714
SsiI CCGC 2 cut(s) 852, 859
StyD4I CCNGG 1 cut(s) 116
TaaI ACNGT 2 cut(s) 562, 612
TaiI ACGT 1 cut(s) 941
TaqI TCGA 2 cut(s) 359, 868
TasI AATT 5 cut(s) 399, 456, 496, 627, 714
TauI GCSGC 1 cut(s) 861
TfiI GAWTC 1 cut(s) 269
Tru1I TTAA 2 cut(s) 243, 614
Tru9I TTAA 2 cut(s) 243, 614
TscAI CASTG 3 cut(s) 240, 615, 919
TseI GCWGC 6 cut(s) 191, 474, 477, 696, 950, 953
TspDTI ATGAA 5 cut(s) 329, 726, 893, 899, 916
TspRI CASTG 3 cut(s) 240, 615, 919
XhoI CTCGAG 1 cut(s) 867
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.