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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom01g10910 |
| rosa_chinensis | RchiOBHm_Chr4g0392531 RchiOBHm_Chr4g0410971 |
| rosa_laevigata | RLG00000003960 RLG00000022712 RLG00000029384 RLG00000034084 RLG00000034554 |
| rosa_multiflora | Rmu_sc0002343.1_g000077 Rmu_sc0006432.1_g000008 Rmu_sc0037170.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00033090 Rroxscaffold_1G00060150 Rroxscaffold_2G00117630 Rroxscaffold_2G00128320 Rroxscaffold_3G00245960 Rroxscaffold_5G00342110 Rroxscaffold_5G00366850 Rroxscaffold_5G00368690 |
| rosa_samantha | Rh1DG127400 Rh2AG332200 Rh2AG463900 Rh2AG480800 Rh2CG467000 Rh3BG346400 Rh3CG344300 Rh3DG345500 Rh4AG256100 Rh4BG049600 Rh4BG261400 Rh5AG320600 Rh5BG126500 Rh5CG356300 Rh5DG556100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 23, 44, 186 |
| AclWI | GGATC | 1 cut(s) | 86 |
| AfaI | GTAC | 1 cut(s) | 59 |
| AgsI | TTSAA | 1 cut(s) | 253 |
| AluBI | AGCT | 1 cut(s) | 154 |
| AluI | AGCT | 1 cut(s) | 154 |
| Alw21I | GWGCWC | 1 cut(s) | 156 |
| AlwI | GGATC | 1 cut(s) | 86 |
| Ama87I | CYCGRG | 1 cut(s) | 17 |
| AoxI | GGCC | 1 cut(s) | 8 |
| ApeKI | GCWGC | 3 cut(s) | 41, 203, 206 |
| AsuHPI | GGTGA | 1 cut(s) | 233 |
| AvaI | CYCGRG | 1 cut(s) | 17 |
| BanII | GRGCYC | 1 cut(s) | 156 |
| Bbv12I | GWGCWC | 1 cut(s) | 156 |
| BbvI | GCAGC | 3 cut(s) | 53, 215, 218 |
| BccI | CCATC | 2 cut(s) | 43, 71 |
| BisI | GCNGC | 3 cut(s) | 42, 204, 207 |
| BlsI | GCNGC | 3 cut(s) | 43, 205, 208 |
| BmeT110I | CYCGRG | 1 cut(s) | 17 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 20, 50 |
| BseMII | CTCAG | 1 cut(s) | 276 |
| BseRI | GAGGAG | 2 cut(s) | 44, 113 |
| BseXI | GCAGC | 3 cut(s) | 53, 215, 218 |
| BsgI | GTGCAG | 1 cut(s) | 222 |
| BshFI | GGCC | 1 cut(s) | 10 |
| BsiHKAI | GWGCWC | 1 cut(s) | 156 |
| BsiHKCI | CYCGRG | 1 cut(s) | 17 |
| BslFI | GGGAC | 1 cut(s) | 259 |
| BsmFI | GGGAC | 1 cut(s) | 259 |
| BsnI | GGCC | 1 cut(s) | 10 |
| BsoBI | CYCGRG | 1 cut(s) | 17 |
| Bsp1286I | GDGCHC | 1 cut(s) | 156 |
| Bsp143I | GATC | 1 cut(s) | 78 |
| BspACI | CCGC | 3 cut(s) | 23, 44, 186 |
| BspANI | GGCC | 1 cut(s) | 10 |
| BspCNI | CTCAG | 1 cut(s) | 275 |
| BspPI | GGATC | 1 cut(s) | 86 |
| BssMI | GATC | 1 cut(s) | 78 |
| BstDEI | CTNAG | 1 cut(s) | 262 |
| BstKTI | GATC | 1 cut(s) | 81 |
| BstMBI | GATC | 1 cut(s) | 78 |
| BstV1I | GCAGC | 3 cut(s) | 53, 215, 218 |
| BstX2I | RGATCY | 1 cut(s) | 78 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 70 |
| BstYI | RGATCY | 1 cut(s) | 78 |
| BsuRI | GGCC | 1 cut(s) | 10 |
| BtsIMutI | CAGTG | 1 cut(s) | 270 |
| Csp6I | GTAC | 1 cut(s) | 58 |
| CviJI | RGCY | 3 cut(s) | 10, 117, 154 |
| CviKI_1 | RGCY | 3 cut(s) | 10, 117, 154 |
| CviQI | GTAC | 1 cut(s) | 58 |
| DdeI | CTNAG | 1 cut(s) | 262 |
| DpnI | GATC | 1 cut(s) | 80 |
| DpnII | GATC | 1 cut(s) | 78 |
| EciI | GGCGGA | 1 cut(s) | 201 |
| Ecl136II | GAGCTC | 1 cut(s) | 154 |
| Eco147I | AGGCCT | 1 cut(s) | 10 |
| Eco24I | GRGCYC | 1 cut(s) | 156 |
| Eco53kI | GAGCTC | 1 cut(s) | 154 |
| Eco88I | CYCGRG | 1 cut(s) | 17 |
| EcoICRI | GAGCTC | 1 cut(s) | 154 |
| EcoT38I | GRGCYC | 1 cut(s) | 156 |
| FaiI | YATR | 2 cut(s) | 138, 168 |
| FaqI | GGGAC | 1 cut(s) | 259 |
| Fnu4HI | GCNGC | 3 cut(s) | 42, 204, 207 |
| FriOI | GRGCYC | 1 cut(s) | 156 |
| Fsp4HI | GCNGC | 3 cut(s) | 42, 204, 207 |
| GluI | GCNGC | 3 cut(s) | 42, 204, 207 |
| HaeIII | GGCC | 1 cut(s) | 10 |
| HinfI | GANTC | 2 cut(s) | 32, 268 |
| HphI | GGTGA | 1 cut(s) | 233 |
| Hpy166II | GTNNAC | 1 cut(s) | 60 |
| Hpy188I | TCNGA | 1 cut(s) | 68 |
| Hpy8I | GTNNAC | 1 cut(s) | 60 |
| HpyCH4V | TGCA | 2 cut(s) | 41, 203 |
| HpyF3I | CTNAG | 1 cut(s) | 262 |
| Kzo9I | GATC | 1 cut(s) | 78 |
| LpnPI | CCDG | 1 cut(s) | 67 |
| Lsp1109I | GCAGC | 3 cut(s) | 53, 215, 218 |
| MalI | GATC | 1 cut(s) | 80 |
| MboI | GATC | 1 cut(s) | 78 |
| MboII | GAAGA | 1 cut(s) | 136 |
| MflI | RGATCY | 1 cut(s) | 78 |
| MhlI | GDGCHC | 1 cut(s) | 156 |
| MlyI | GAGTC | 1 cut(s) | 41 |
| MnlI | CCTC | 6 cut(s) | 13, 21, 22, 91, 188, 219 |
| MslI | CAYNNNNRTG | 1 cut(s) | 68 |
| MspA1I | CMGCKG | 1 cut(s) | 44 |
| NdeII | GATC | 1 cut(s) | 78 |
| PaeR7I | CTCGAG | 1 cut(s) | 17 |
| PceI | AGGCCT | 1 cut(s) | 10 |
| PkrI | GCNGC | 3 cut(s) | 43, 205, 208 |
| PleI | GAGTC | 1 cut(s) | 40 |
| PpsI | GAGTC | 1 cut(s) | 40 |
| Psp124BI | GAGCTC | 1 cut(s) | 156 |
| PspXI | VCTCGAGB | 1 cut(s) | 17 |
| PsuI | RGATCY | 1 cut(s) | 78 |
| RsaI | GTAC | 1 cut(s) | 59 |
| RsaNI | GTAC | 1 cut(s) | 58 |
| RseI | CAYNNNNRTG | 1 cut(s) | 68 |
| SacI | GAGCTC | 1 cut(s) | 156 |
| SatI | GCNGC | 3 cut(s) | 42, 204, 207 |
| Sau3AI | GATC | 1 cut(s) | 78 |
| SchI | GAGTC | 1 cut(s) | 41 |
| SduI | GDGCHC | 1 cut(s) | 156 |
| SetI | ASST | 3 cut(s) | 137, 156, 199 |
| Sfr274I | CTCGAG | 1 cut(s) | 17 |
| SgeI | CNNG | 6 cut(s) | 29, 31, 94, 130, 167, 222 |
| SlaI | CTCGAG | 1 cut(s) | 17 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 68 |
| SmlI | CTYRAG | 1 cut(s) | 17 |
| SmoI | CTYRAG | 1 cut(s) | 17 |
| SseBI | AGGCCT | 1 cut(s) | 10 |
| SsiI | CCGC | 3 cut(s) | 23, 44, 186 |
| SstI | GAGCTC | 1 cut(s) | 156 |
| StuI | AGGCCT | 1 cut(s) | 10 |
| TaqI | TCGA | 1 cut(s) | 18 |
| TatI | WGTACW | 1 cut(s) | 57 |
| TscAI | CASTG | 1 cut(s) | 270 |
| TseI | GCWGC | 3 cut(s) | 41, 203, 206 |
| TspDTI | ATGAA | 1 cut(s) | 143 |
| TspRI | CASTG | 1 cut(s) | 270 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 70 |
| XhoI | CTCGAG | 1 cut(s) | 17 |