Rh3BG346400

Phosphatidylinositol 4-kinase gamma 2-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0003961
Physical Location & Seq
Forward (+)
37891960 .. 37892745
786 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG346400.1

Sequence Viewer

Length: 786 bp
ATGCAGTTGTTGGCATCTAGTGGTTGCAATGGTACATATTTCCTAAGAGACAGGTTTGTAGATGTTGTTGGTGTCTTCAAACCCAGAGATGAGGAGTATGGATCAATAAATAACCCCAGGGGAAAGTATTCGCTATCGGATGATCTGAAGAAAGTGGTGGAGGTCGGAGGAGGGGCTGAAAGGGAAGTGGCAGCTTATCTCTTGGATCATGGGTTTGTTGATGTTCCTTTGACACTGATGGTTAAGTGTTTTCAGAAGTTTGTTGATGATGCTTTACAAGGCAATGAGAAGGTTGGTTCACTGCAAAAGTTTGTGAAGCACAAAGGAAGTTTAGATGAGTTTGGTTGTGGTTGTTTTTCGACTCATGATGTGCATAAGTTATCAACTTTGGATGTTAGAATTGCTAACATAGATAGACACATGGCAAATATGTTGGTTGCCCATGATGGCAAACTAATTCCTATTGATCATGGCTACTGCTTGCCAACCAATGCTAATTTTGAAGCAGGCTGTAAGTTTGAATGGTTAGAATGCCCTCAGGCACAATCCTCATATTCAACTATTGTTGTTGACGACATCAGAGATCTTGAGGCAAAAAAAGATATTGAACTGTTAAAGGAGAACCGAATTGACCTCATGAGGTCTGAAATCACTATAAAGATCTGTACGATGCTTTTGAAGAAAGCGGTGGAAAGCAGCCTTACTCCAAATGAAATTGGGTACATGATGATGAGGAAGAATGAGCATGACAAATCTTCTCTCGAAAAGTTGATAGAAAAGGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0006950 GO:0006970 GO:0008150 GO:0009628 GO:0009651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050896
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PI3_PI4_kinase ubiquitin

Protein Analysis

261

Amino Acids

29.34

Weight (kDa)

5.79

Isoelectric Point (pI)

23.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PI3_PI4_kinase PF00454 13 - 238 1e-24 Phosphatidylinositol 3- and 4-kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 686
AclWI GGATC 2 cut(s) 109, 213
AcuI CTGAAG 1 cut(s) 167
AfaI GTAC 3 cut(s) 34, 667, 722
AgsI TTSAA 6 cut(s) 79, 503, 521, 558, 608, 679
AjnI CCWGG 1 cut(s) 116
AluBI AGCT 1 cut(s) 194
AluI AGCT 1 cut(s) 194
Alw26I GTCTC 1 cut(s) 42
AlwI GGATC 2 cut(s) 109, 213
ApeKI GCWGC 2 cut(s) 191, 696
Asp700I GAANNNNTTC 1 cut(s) 127
AxyI CCTNAGG 1 cut(s) 537
BbsI GAAGAC 1 cut(s) 67
BbvI GCAGC 2 cut(s) 203, 708
BccI CCATC 2 cut(s) 232, 440
BciT130I CCWGG 1 cut(s) 118
BclI TGATCA 1 cut(s) 466
BcoDI GTCTC 1 cut(s) 42
BfaI CTAG 1 cut(s) 18
BglII AGATCT 2 cut(s) 583, 660
BisI GCNGC 2 cut(s) 192, 697
BlsI GCNGC 2 cut(s) 193, 698
Bme1390I CCNGG 1 cut(s) 118
BmrFI CCNGG 1 cut(s) 118
BmsI GCATC 3 cut(s) 23, 259, 660
BpiI GAAGAC 1 cut(s) 67
BpuEI CTTGAG 1 cut(s) 608
BsaJI CCNNGG 2 cut(s) 116, 117
Bse21I CCTNAGG 1 cut(s) 537
Bse3DI GCAATG 2 cut(s) 34, 289
BseBI CCWGG 1 cut(s) 118
BseDI CCNNGG 2 cut(s) 116, 117
BseGI GGATG 2 cut(s) 145, 397
BseMI GCAATG 2 cut(s) 34, 289
BseMII CTCAG 1 cut(s) 551
BseRI GAGGAG 2 cut(s) 107, 183
BseXI GCAGC 2 cut(s) 203, 708
BsmAI GTCTC 1 cut(s) 42
BsmI GAATGC 1 cut(s) 536
Bsp143I GATC 6 cut(s) 101, 142, 205, 466, 583, 660
BspACI CCGC 1 cut(s) 686
BspCNI CTCAG 1 cut(s) 550
BspHI TCATGA 2 cut(s) 364, 636
BspPI GGATC 2 cut(s) 109, 213
BsrDI GCAATG 2 cut(s) 34, 289
BssECI CCNNGG 2 cut(s) 116, 117
BssMI GATC 6 cut(s) 101, 142, 205, 466, 583, 660
Bst2UI CCWGG 1 cut(s) 118
Bst4CI ACNGT 1 cut(s) 612
BstC8I GCNNGC 2 cut(s) 482, 508
BstDEI CTNAG 2 cut(s) 44, 537
BstF5I GGATG 2 cut(s) 145, 397
BstKTI GATC 6 cut(s) 104, 145, 208, 469, 586, 663
BstMAI GTCTC 1 cut(s) 42
BstMBI GATC 6 cut(s) 101, 142, 205, 466, 583, 660
BstNI CCWGG 1 cut(s) 118
BstSCI CCNGG 1 cut(s) 116
BstV1I GCAGC 2 cut(s) 203, 708
BstV2I GAAGAC 1 cut(s) 67
BstX2I RGATCY 2 cut(s) 583, 660
BstYI RGATCY 2 cut(s) 583, 660
Bsu36I CCTNAGG 1 cut(s) 537
BtsCI GGATG 2 cut(s) 145, 397
BtsI GCAGTG 1 cut(s) 299
BtsIMutI CAGTG 2 cut(s) 233, 299
Cac8I GCNNGC 2 cut(s) 482, 508
CciI TCATGA 2 cut(s) 364, 636
Csp6I GTAC 3 cut(s) 33, 666, 721
CviAII CATG 9 cut(s) 209, 365, 421, 443, 470, 637, 724, 746, 783
CviJI RGCY 5 cut(s) 176, 194, 474, 510, 699
CviKI_1 RGCY 5 cut(s) 176, 194, 474, 510, 699
CviQI GTAC 3 cut(s) 33, 666, 721
DdeI CTNAG 2 cut(s) 44, 537
DpnI GATC 6 cut(s) 103, 144, 207, 468, 585, 662
DpnII GATC 6 cut(s) 101, 142, 205, 466, 583, 660
Eco57I CTGAAG 1 cut(s) 167
Eco81I CCTNAGG 1 cut(s) 537
EcoRII CCWGG 1 cut(s) 116
FaeI CATG 9 cut(s) 212, 368, 424, 446, 473, 640, 727, 749, 786
FatI CATG 9 cut(s) 208, 364, 420, 442, 469, 636, 723, 745, 782
FbaI TGATCA 1 cut(s) 466
Fnu4HI GCNGC 2 cut(s) 192, 697
FokI GGATG 2 cut(s) 152, 404
Fsp4HI GCNGC 2 cut(s) 192, 697
FspBI CTAG 1 cut(s) 18
GluI GCNGC 2 cut(s) 192, 697
Hin1II CATG 9 cut(s) 212, 368, 424, 446, 473, 640, 727, 749, 786
HincII GTYRAC 1 cut(s) 571
HindII GTYRAC 1 cut(s) 571
HinfI GANTC 1 cut(s) 361
Hpy166II GTNNAC 2 cut(s) 299, 571
Hpy188I TCNGA 6 cut(s) 139, 147, 167, 255, 581, 646
Hpy188III TCNNGA 4 cut(s) 365, 587, 637, 761
Hpy8I GTNNAC 2 cut(s) 299, 571
HpyAV CCTTC 1 cut(s) 283
HpyCH4III ACNGT 1 cut(s) 612
HpyCH4V TGCA 4 cut(s) 4, 27, 304, 373
HpyF3I CTNAG 2 cut(s) 44, 537
Hsp92II CATG 9 cut(s) 212, 368, 424, 446, 473, 640, 727, 749, 786
Ksp22I TGATCA 1 cut(s) 466
Kzo9I GATC 6 cut(s) 101, 142, 205, 466, 583, 660
LpnPI CCDG 6 cut(s) 37, 97, 103, 130, 492, 524
Lsp1109I GCAGC 2 cut(s) 203, 708
LweI GCATC 3 cut(s) 23, 259, 660
MaeI CTAG 1 cut(s) 18
MalI GATC 6 cut(s) 103, 144, 207, 468, 585, 662
MboI GATC 6 cut(s) 101, 142, 205, 466, 583, 660
MboII GAAGA 5 cut(s) 67, 160, 691, 747, 748
MflI RGATCY 2 cut(s) 583, 660
MluCI AATT 5 cut(s) 399, 456, 496, 627, 714
MlyI GAGTC 1 cut(s) 355
MmeI TCCRAC 1 cut(s) 145
MroXI GAANNNNTTC 1 cut(s) 127
MseI TTAA 2 cut(s) 243, 614
MslI CAYNNNNRTG 1 cut(s) 728
MspR9I CCNGG 1 cut(s) 118
Mva1269I GAATGC 1 cut(s) 536
MvaI CCWGG 1 cut(s) 118
NdeII GATC 6 cut(s) 101, 142, 205, 466, 583, 660
NlaIII CATG 9 cut(s) 212, 368, 424, 446, 473, 640, 727, 749, 786
PagI TCATGA 2 cut(s) 364, 636
PasI CCCWGGG 1 cut(s) 117
PctI GAATGC 1 cut(s) 536
PdmI GAANNNNTTC 1 cut(s) 127
PkrI GCNGC 2 cut(s) 193, 698
PleI GAGTC 1 cut(s) 355
PpsI GAGTC 1 cut(s) 355
Psp6I CCWGG 1 cut(s) 116
PspGI CCWGG 1 cut(s) 116
PsuI RGATCY 2 cut(s) 583, 660
RsaI GTAC 3 cut(s) 34, 667, 722
RsaNI GTAC 3 cut(s) 33, 666, 721
RseI CAYNNNNRTG 1 cut(s) 728
SaqAI TTAA 2 cut(s) 243, 614
SatI GCNGC 2 cut(s) 192, 697
Sau3AI GATC 6 cut(s) 101, 142, 205, 466, 583, 660
SchI GAGTC 1 cut(s) 355
ScrFI CCNGG 1 cut(s) 118
SetI ASST 6 cut(s) 56, 165, 196, 294, 636, 644
SfaNI GCATC 3 cut(s) 23, 259, 660
SmiMI CAYNNNNRTG 1 cut(s) 728
SmlI CTYRAG 1 cut(s) 587
SmoI CTYRAG 1 cut(s) 587
Sse9I AATT 5 cut(s) 399, 456, 496, 627, 714
SsiI CCGC 1 cut(s) 686
SspMI CTAG 1 cut(s) 18
StyD4I CCNGG 1 cut(s) 116
TaaI ACNGT 1 cut(s) 612
TaqI TCGA 2 cut(s) 359, 762
TasI AATT 5 cut(s) 399, 456, 496, 627, 714
Tru1I TTAA 2 cut(s) 243, 614
Tru9I TTAA 2 cut(s) 243, 614
TscAI CASTG 2 cut(s) 240, 306
TseI GCWGC 2 cut(s) 191, 696
TspDTI ATGAA 1 cut(s) 726
TspRI CASTG 2 cut(s) 240, 306
XmnI GAANNNNTTC 1 cut(s) 127
XspI CTAG 1 cut(s) 18
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.