RchiOBHm_Chr4g0410971

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Forward (+)
34749889 .. 34752037
2149 bp
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UTR
Exon/CDS
Intron
PRQ38184

Sequence Viewer

Length: 138 bp
ATGGATTGGATCTTGTACCCCATTCTTGCATTCTGTCTCTTGCGTCTGCGATTAGATCTGCTGCTGCGGTCGATTGGTCGTGTGCAGGAACAAAAAGCAGGTGCAACTCTTCTTCTGGTGATAGACTGGGTCAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

45

Amino Acids

5.25

Weight (kDa)

7.95

Isoelectric Point (pI)

52.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 89
Acc36I ACCTGC 1 cut(s) 89
AciI CCGC 1 cut(s) 67
AclWI GGATC 1 cut(s) 17
AfaI GTAC 1 cut(s) 17
Alw26I GTCTC 1 cut(s) 41
AlwI GGATC 1 cut(s) 17
ApeKI GCWGC 2 cut(s) 61, 64
AsuHPI GGTGA 1 cut(s) 130
BbvI GCAGC 2 cut(s) 48, 51
BcoDI GTCTC 1 cut(s) 41
BfuAI ACCTGC 1 cut(s) 89
BglII AGATCT 1 cut(s) 55
BisI GCNGC 2 cut(s) 62, 65
BlsI GCNGC 2 cut(s) 63, 66
BmrI ACTGGG 1 cut(s) 136
BmuI ACTGGG 1 cut(s) 136
Bse1I ACTGG 1 cut(s) 131
BseNI ACTGG 1 cut(s) 131
BseXI GCAGC 2 cut(s) 48, 51
BsgI GTGCAG 1 cut(s) 104
Bsh1285I CGRYCG 1 cut(s) 71
BsiEI CGRYCG 1 cut(s) 71
BsmAI GTCTC 1 cut(s) 41
BsmI GAATGC 1 cut(s) 29
Bsp143I GATC 2 cut(s) 9, 55
BspACI CCGC 1 cut(s) 67
BspMI ACCTGC 1 cut(s) 89
BspPI GGATC 1 cut(s) 17
BsrI ACTGG 1 cut(s) 131
BssMI GATC 2 cut(s) 9, 55
Bst6I CTCTTC 1 cut(s) 114
BstKTI GATC 2 cut(s) 12, 58
BstMAI GTCTC 1 cut(s) 41
BstMBI GATC 2 cut(s) 9, 55
BstMCI CGRYCG 1 cut(s) 71
BstV1I GCAGC 2 cut(s) 48, 51
BstX2I RGATCY 2 cut(s) 9, 55
BstYI RGATCY 2 cut(s) 9, 55
BveI ACCTGC 1 cut(s) 89
CseI GACGC 1 cut(s) 32
Csp6I GTAC 1 cut(s) 16
CviQI GTAC 1 cut(s) 16
DpnI GATC 2 cut(s) 11, 57
DpnII GATC 2 cut(s) 9, 55
Eam1104I CTCTTC 1 cut(s) 114
EarI CTCTTC 1 cut(s) 114
Fnu4HI GCNGC 2 cut(s) 62, 65
Fsp4HI GCNGC 2 cut(s) 62, 65
GluI GCNGC 2 cut(s) 62, 65
HgaI GACGC 1 cut(s) 32
HphI GGTGA 1 cut(s) 130
HpyCH4V TGCA 3 cut(s) 29, 85, 104
Kzo9I GATC 2 cut(s) 9, 55
LpnPI CCDG 4 cut(s) 71, 84, 101, 112
Lsp1109I GCAGC 2 cut(s) 48, 51
MalI GATC 2 cut(s) 11, 57
MboI GATC 2 cut(s) 9, 55
MboII GAAGA 2 cut(s) 101, 104
MfeI CAATTG 1 cut(s) 133
MflI RGATCY 2 cut(s) 9, 55
MluCI AATT 1 cut(s) 133
MunI CAATTG 1 cut(s) 133
Mva1269I GAATGC 1 cut(s) 29
NdeII GATC 2 cut(s) 9, 55
PaqCI CACCTGC 1 cut(s) 89
PctI GAATGC 1 cut(s) 29
PflFI GACNNNGTC 1 cut(s) 128
PkrI GCNGC 2 cut(s) 63, 66
PsuI RGATCY 2 cut(s) 9, 55
PsyI GACNNNGTC 1 cut(s) 128
RsaI GTAC 1 cut(s) 17
RsaNI GTAC 1 cut(s) 16
SatI GCNGC 2 cut(s) 62, 65
Sau3AI GATC 2 cut(s) 9, 55
SetI ASST 1 cut(s) 103
SgeI CNNG 7 cut(s) 25, 38, 52, 92, 98, 111, 128
Sse9I AATT 1 cut(s) 133
SsiI CCGC 1 cut(s) 67
TaqI TCGA 1 cut(s) 71
TasI AATT 1 cut(s) 133
TseI GCWGC 2 cut(s) 61, 64
Tth111I GACNNNGTC 1 cut(s) 128
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.