RchiOBHm_Chr7g0229621

Transmembrane protein 205

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
53187482 .. 53187984
503 bp
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UTR
Exon/CDS
Intron
PRQ20570

Sequence Viewer

Length: 159 bp
ATGGTCCAAAAATGTGCAAGTTGCGAAGGTGAACCGAAACTAGCAGCCATGAATAAGAAGTTCGGGATGATTCACGGGTTACTATCTCTTGCCAATATTATGGCCTTTGGCAGCCTTGCCATGCACTCACGGTACTTTGCAGGTAAAATTAATCTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

52

Amino Acids

5.63

Weight (kDa)

9.51

Isoelectric Point (pI)

42.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 131
AfaI GTAC 1 cut(s) 134
AoxI GGCC 1 cut(s) 102
ApeKI GCWGC 2 cut(s) 44, 111
AseI ATTAAT 1 cut(s) 150
AspS9I GGNCC 1 cut(s) 4
AsuHPI GGTGA 1 cut(s) 41
AvaII GGWCC 1 cut(s) 4
BbvI GCAGC 2 cut(s) 56, 123
BfaI CTAG 1 cut(s) 41
BfmI CTRYAG 1 cut(s) 155
BfuAI ACCTGC 1 cut(s) 131
BisI GCNGC 2 cut(s) 45, 112
BlsI GCNGC 2 cut(s) 46, 113
Bme18I GGWCC 1 cut(s) 4
BmgT120I GGNCC 1 cut(s) 4
BseGI GGATG 1 cut(s) 72
BseXI GCAGC 2 cut(s) 56, 123
BshFI GGCC 1 cut(s) 104
BsnI GGCC 1 cut(s) 104
BspANI GGCC 1 cut(s) 104
BspMI ACCTGC 1 cut(s) 131
Bst4CI ACNGT 1 cut(s) 132
BstF5I GGATG 1 cut(s) 72
BstSFI CTRYAG 1 cut(s) 155
BstV1I GCAGC 2 cut(s) 56, 123
BstXI CCANNNNNNTGG 1 cut(s) 100
BsuRI GGCC 1 cut(s) 104
BtsCI GGATG 1 cut(s) 72
BveI ACCTGC 1 cut(s) 131
Cfr13I GGNCC 1 cut(s) 4
Csp6I GTAC 1 cut(s) 133
CviAII CATG 2 cut(s) 49, 121
CviJI RGCY 3 cut(s) 47, 104, 114
CviKI_1 RGCY 3 cut(s) 47, 104, 114
CviQI GTAC 1 cut(s) 133
Eco47I GGWCC 1 cut(s) 4
FaeI CATG 2 cut(s) 52, 124
FaiI YATR 3 cut(s) 50, 101, 122
FatI CATG 2 cut(s) 48, 120
Fnu4HI GCNGC 2 cut(s) 45, 112
FokI GGATG 1 cut(s) 79
Fsp4HI GCNGC 2 cut(s) 45, 112
FspBI CTAG 1 cut(s) 41
GluI GCNGC 2 cut(s) 45, 112
HaeIII GGCC 1 cut(s) 104
Hin1II CATG 2 cut(s) 52, 124
HinfI GANTC 1 cut(s) 70
HphI GGTGA 1 cut(s) 41
Hpy166II GTNNAC 1 cut(s) 32
Hpy188III TCNNGA 1 cut(s) 64
Hpy8I GTNNAC 1 cut(s) 32
HpyAV CCTTC 1 cut(s) 20
HpyCH4III ACNGT 1 cut(s) 132
HpyCH4V TGCA 3 cut(s) 17, 124, 140
Hsp92II CATG 2 cut(s) 52, 124
LpnPI CCDG 1 cut(s) 126
Lsp1109I GCAGC 2 cut(s) 56, 123
MaeI CTAG 1 cut(s) 41
MaeIII GTNAC 1 cut(s) 78
MluCI AATT 1 cut(s) 147
MseI TTAA 1 cut(s) 150
NlaIII CATG 2 cut(s) 52, 124
PfeI GAWTC 1 cut(s) 70
PkrI GCNGC 2 cut(s) 46, 113
PshBI ATTAAT 1 cut(s) 150
PspPI GGNCC 1 cut(s) 4
RsaI GTAC 1 cut(s) 134
RsaNI GTAC 1 cut(s) 133
SaqAI TTAA 1 cut(s) 150
SatI GCNGC 2 cut(s) 45, 112
Sau96I GGNCC 1 cut(s) 4
SetI ASST 2 cut(s) 31, 145
SfcI CTRYAG 1 cut(s) 155
SinI GGWCC 1 cut(s) 4
Sse9I AATT 1 cut(s) 147
SspI AATATT 1 cut(s) 97
SspMI CTAG 1 cut(s) 41
TaaI ACNGT 1 cut(s) 132
TasI AATT 1 cut(s) 147
TfiI GAWTC 1 cut(s) 70
Tru1I TTAA 1 cut(s) 150
Tru9I TTAA 1 cut(s) 150
TseI GCWGC 2 cut(s) 44, 111
TspDTI ATGAA 1 cut(s) 65
VpaK11BI GGWCC 1 cut(s) 4
VspI ATTAAT 1 cut(s) 150
XspI CTAG 1 cut(s) 41
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.