RchiOBHm_Chr7g0230001

Transmembrane protein 205

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
53509448 .. 53511562
2115 bp
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UTR
Exon/CDS
Intron
PRQ20607

Sequence Viewer

Length: 192 bp
ATGGAACTCTTCCAGTGTAGCAGACAAGTACCAACTCGGCCTTTTGCTTTCAATCTCACCAATTTGTTCGTCTTCACACCCATGACTATTGAGATATTGAAGAAATGGCATAAGGTAGAGAGGGAACAGAATATTGGGGAAGAAGTGGGATGTTCCAAAAATGTGCAAGTTGCGAAGGTGAACCGAAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

63

Amino Acids

7.4

Weight (kDa)

9.24

Isoelectric Point (pI)

48.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 30
AgsI TTSAA 2 cut(s) 52, 100
AjuI GAANNNNNNNTTGG 2 cut(s) 117, 149
AoxI GGCC 1 cut(s) 38
AsuHPI GGTGA 2 cut(s) 49, 190
BbsI GAAGAC 1 cut(s) 64
BfaI CTAG 1 cut(s) 190
BpiI GAAGAC 1 cut(s) 64
Bse1I ACTGG 1 cut(s) 13
BseGI GGATG 1 cut(s) 155
BseNI ACTGG 1 cut(s) 13
BshFI GGCC 1 cut(s) 40
BsnI GGCC 1 cut(s) 40
BspANI GGCC 1 cut(s) 40
BsrI ACTGG 1 cut(s) 13
Bst6I CTCTTC 1 cut(s) 14
BstF5I GGATG 1 cut(s) 155
BstV2I GAAGAC 1 cut(s) 64
BsuRI GGCC 1 cut(s) 40
BtsCI GGATG 1 cut(s) 155
BtsIMutI CAGTG 1 cut(s) 20
Csp6I GTAC 1 cut(s) 29
CviAII CATG 1 cut(s) 82
CviJI RGCY 1 cut(s) 40
CviKI_1 RGCY 1 cut(s) 40
CviQI GTAC 1 cut(s) 29
Eam1104I CTCTTC 1 cut(s) 14
EarI CTCTTC 1 cut(s) 14
FaeI CATG 1 cut(s) 85
FaiI YATR 2 cut(s) 83, 111
FatI CATG 1 cut(s) 81
FokI GGATG 1 cut(s) 162
FspBI CTAG 1 cut(s) 190
HaeIII GGCC 1 cut(s) 40
Hin1II CATG 1 cut(s) 85
HphI GGTGA 2 cut(s) 49, 190
Hpy166II GTNNAC 1 cut(s) 181
Hpy8I GTNNAC 1 cut(s) 181
HpyAV CCTTC 1 cut(s) 169
HpyCH4V TGCA 1 cut(s) 166
Hsp92II CATG 1 cut(s) 85
LpnPI CCDG 1 cut(s) 26
MaeI CTAG 1 cut(s) 190
MboII GAAGA 3 cut(s) 64, 112, 152
MluCI AATT 1 cut(s) 61
MnlI CCTC 1 cut(s) 114
MslI CAYNNNNRTG 1 cut(s) 80
NlaIII CATG 1 cut(s) 85
NmeAIII GCCGAG 1 cut(s) 16
RsaI GTAC 1 cut(s) 30
RsaNI GTAC 1 cut(s) 29
RseI CAYNNNNRTG 1 cut(s) 80
SetI ASST 2 cut(s) 117, 180
SgeI CNNG 5 cut(s) 25, 38, 48, 94, 179
SmiMI CAYNNNNRTG 1 cut(s) 80
Sse9I AATT 1 cut(s) 61
SspI AATATT 1 cut(s) 133
SspMI CTAG 1 cut(s) 190
TasI AATT 1 cut(s) 61
TscAI CASTG 1 cut(s) 20
TspRI CASTG 1 cut(s) 20
XspI CTAG 1 cut(s) 190
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.