U1 small nuclear ribonucleoprotein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G62580 |
| fragaria_vesca | FvH4_5g39460 FvH4_5g39460 |
| malus_domestica | MD03G1296800.v1.1 MD04G1089900.v1.1 MD11G1316400.v1.1 MD17G1137100.v1.1 |
| prunus_persica | Prupe.8G270400_v2.0.a1 |
| pyrus_communis | pycom03g23530 pycom11g27610 |
| rosa_chinensis | RchiOBHm_Chr3g0460601 RchiOBHm_Chr4g0442591 RchiOBHm_Chr5g0039051 RchiOBHm_Chr6g0294301 RchiOBHm_Chr7g0189431 RchiOBHm_Chr7g0229621 RchiOBHm_Chr7g0230001 RchiOBHm_Chr7g0230901 RchiOBHm_Chr7g0241771 |
| rosa_laevigata | RLG00000000545 |
| rosa_multiflora | Rmu_sc0000851.1_g000004 Rmu_sc0010095.1_g000003 Rmu_sc0035295.1_g000002 |
| rosa_roxburghii | Rroxscaffold_3G00218680 Rroxscaffold_7G00215870 |
| rosa_rugosa | Rorug06G0497700 Rorug07G0347100 |
| rosa_samantha | Rh2AG433100 Rh5DG465500 Rh7AG501600 Rh7BG472900 Rh7CG517900 Rh7DG104700 Rh7DG403100 Rh7DG486700 |
| rosa_wichuraiana | Rw5G049000 Rw7G033970 Rw7G042400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfiI | CCNNNNNNNGG | 2 cut(s) | 104, 361 |
| AgsI | TTSAA | 2 cut(s) | 146, 176 |
| AluBI | AGCT | 2 cut(s) | 152, 350 |
| AluI | AGCT | 2 cut(s) | 152, 350 |
| Alw26I | GTCTC | 1 cut(s) | 197 |
| AoxI | GGCC | 1 cut(s) | 60 |
| ApeKI | GCWGC | 1 cut(s) | 158 |
| AspLEI | GCGC | 1 cut(s) | 130 |
| AsuHPI | GGTGA | 1 cut(s) | 119 |
| BbvI | GCAGC | 1 cut(s) | 145 |
| BccI | CCATC | 3 cut(s) | 217, 350, 359 |
| BcoDI | GTCTC | 1 cut(s) | 197 |
| BfaI | CTAG | 1 cut(s) | 347 |
| BisI | GCNGC | 1 cut(s) | 159 |
| BlsI | GCNGC | 1 cut(s) | 160 |
| BsaJI | CCNNGG | 1 cut(s) | 98 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 104, 361 |
| Bse1I | ACTGG | 1 cut(s) | 322 |
| BseDI | CCNNGG | 1 cut(s) | 98 |
| BseGI | GGATG | 2 cut(s) | 342, 370 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 104, 361 |
| BseNI | ACTGG | 1 cut(s) | 322 |
| BseXI | GCAGC | 1 cut(s) | 145 |
| BshFI | GGCC | 1 cut(s) | 62 |
| BslFI | GGGAC | 1 cut(s) | 80 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 104, 361 |
| BsmAI | GTCTC | 1 cut(s) | 197 |
| BsmBI | CGTCTC | 1 cut(s) | 197 |
| BsmFI | GGGAC | 1 cut(s) | 80 |
| BsnI | GGCC | 1 cut(s) | 62 |
| BspANI | GGCC | 1 cut(s) | 62 |
| BspQI | GCTCTTC | 1 cut(s) | 137 |
| BsrI | ACTGG | 1 cut(s) | 322 |
| BssECI | CCNNGG | 1 cut(s) | 98 |
| BssT1I | CCWWGG | 1 cut(s) | 98 |
| Bst4CI | ACNGT | 2 cut(s) | 142, 356 |
| Bst6I | CTCTTC | 2 cut(s) | 137, 177 |
| BstC8I | GCNNGC | 1 cut(s) | 60 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 102 |
| BstF5I | GGATG | 2 cut(s) | 342, 370 |
| BstHHI | GCGC | 1 cut(s) | 130 |
| BstMAI | GTCTC | 1 cut(s) | 197 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 134, 158, 293 |
| BstV1I | GCAGC | 1 cut(s) | 145 |
| BsuRI | GGCC | 1 cut(s) | 62 |
| BtsCI | GGATG | 2 cut(s) | 342, 370 |
| BtsIMutI | CAGTG | 2 cut(s) | 59, 138 |
| Cac8I | GCNNGC | 1 cut(s) | 60 |
| CfoI | GCGC | 1 cut(s) | 130 |
| CviAII | CATG | 1 cut(s) | 118 |
| CviJI | RGCY | 6 cut(s) | 25, 62, 115, 152, 287, 350 |
| CviKI_1 | RGCY | 6 cut(s) | 25, 62, 115, 152, 287, 350 |
| Eam1104I | CTCTTC | 2 cut(s) | 137, 177 |
| EarI | CTCTTC | 2 cut(s) | 137, 177 |
| Eco130I | CCWWGG | 1 cut(s) | 98 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 102 |
| EcoT14I | CCWWGG | 1 cut(s) | 98 |
| ErhI | CCWWGG | 1 cut(s) | 98 |
| Esp3I | CGTCTC | 1 cut(s) | 197 |
| FaeI | CATG | 1 cut(s) | 121 |
| FaiI | YATR | 8 cut(s) | 44, 119, 182, 194, 218, 261, 263, 294 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 156, 188 |
| FaqI | GGGAC | 1 cut(s) | 80 |
| FatI | CATG | 1 cut(s) | 117 |
| Fnu4HI | GCNGC | 1 cut(s) | 159 |
| FokI | GGATG | 2 cut(s) | 329, 377 |
| Fsp4HI | GCNGC | 1 cut(s) | 159 |
| FspBI | CTAG | 1 cut(s) | 347 |
| GlaI | GCGC | 1 cut(s) | 129 |
| GluI | GCNGC | 1 cut(s) | 159 |
| HaeIII | GGCC | 1 cut(s) | 62 |
| HhaI | GCGC | 1 cut(s) | 130 |
| Hin1II | CATG | 1 cut(s) | 121 |
| Hin6I | GCGC | 1 cut(s) | 128 |
| HinP1I | GCGC | 1 cut(s) | 128 |
| HinfI | GANTC | 1 cut(s) | 235 |
| HphI | GGTGA | 1 cut(s) | 119 |
| Hpy188III | TCNNGA | 1 cut(s) | 327 |
| HpyAV | CCTTC | 1 cut(s) | 388 |
| HpyCH4III | ACNGT | 2 cut(s) | 142, 356 |
| HpyCH4IV | ACGT | 1 cut(s) | 206 |
| HpyCH4V | TGCA | 2 cut(s) | 10, 296 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 134, 158, 293 |
| HpySE526I | ACGT | 1 cut(s) | 206 |
| Hsp92II | CATG | 1 cut(s) | 121 |
| HspAI | GCGC | 1 cut(s) | 128 |
| LguI | GCTCTTC | 1 cut(s) | 137 |
| LpnPI | CCDG | 4 cut(s) | 7, 44, 58, 335 |
| Lsp1109I | GCAGC | 1 cut(s) | 145 |
| MaeI | CTAG | 1 cut(s) | 347 |
| MaeII | ACGT | 1 cut(s) | 206 |
| MboII | GAAGA | 4 cut(s) | 124, 164, 244, 317 |
| MluCI | AATT | 1 cut(s) | 197 |
| MmeI | TCCRAC | 1 cut(s) | 59 |
| MnlI | CCTC | 3 cut(s) | 245, 295, 355 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 134, 158, 293 |
| NlaIII | CATG | 1 cut(s) | 121 |
| PciSI | GCTCTTC | 1 cut(s) | 137 |
| PfeI | GAWTC | 1 cut(s) | 235 |
| PkrI | GCNGC | 1 cut(s) | 160 |
| SapI | GCTCTTC | 1 cut(s) | 137 |
| SatI | GCNGC | 1 cut(s) | 159 |
| SetI | ASST | 6 cut(s) | 92, 109, 154, 209, 256, 352 |
| Sse9I | AATT | 1 cut(s) | 197 |
| SspI | AATATT | 1 cut(s) | 373 |
| SspMI | CTAG | 1 cut(s) | 347 |
| StyI | CCWWGG | 1 cut(s) | 98 |
| TaaI | ACNGT | 2 cut(s) | 142, 356 |
| TaiI | ACGT | 1 cut(s) | 209 |
| TaqI | TCGA | 1 cut(s) | 189 |
| TasI | AATT | 1 cut(s) | 197 |
| TfiI | GAWTC | 1 cut(s) | 235 |
| TscAI | CASTG | 2 cut(s) | 59, 145 |
| TseI | GCWGC | 1 cut(s) | 158 |
| TspDTI | ATGAA | 4 cut(s) | 17, 99, 290, 393 |
| TspRI | CASTG | 2 cut(s) | 59, 145 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 102 |
| XspI | CTAG | 1 cut(s) | 347 |