Rh5DG465500

Transmembrane protein 205

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Reverse (-)
73976442 .. 73978819
2378 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG465500.1

Sequence Viewer

Length: 348 bp
ATGGCGTTGTGGCAGGCCATAGAACACAGAAAATGTAATGAAAAGTCAGTCCCTTGGAAAGGCGAGAAGCCCATGAGTTTTGCGCTCTTCGCCATTGCTCAACAAGCTATTTCTACCAAAGACATTCTTCAAATGATGAAGCAGAAGCATAAGATCAAGAGGGAACAGAACATTGGGGAAGAAGTTGGATGGTCCAAAAATGTGAAAGTTGCAAAGGACACGAATTCTGGAATTCAGGACAAGGAACTTGCTTCTATGATTGAGAGTGTTTCCGAGAAACAGCATTTTACCGCAAAATGGCTTCAACTGCCGACGAGACTGGATGGGATTTTAATACAAGATGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

115

Amino Acids

13.15

Weight (kDa)

9.27

Isoelectric Point (pI)

51.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 291
AcsI RAATTY 2 cut(s) 223, 231
AfiI CCNNNNNNNGG 2 cut(s) 59, 297
AgsI TTSAA 2 cut(s) 131, 305
AjuI GAANNNNNNNTTGG 2 cut(s) 156, 188
AluBI AGCT 1 cut(s) 107
AluI AGCT 1 cut(s) 107
Alw26I GTCTC 1 cut(s) 310
AoxI GGCC 1 cut(s) 15
ApoI RAATTY 2 cut(s) 223, 231
AspLEI GCGC 1 cut(s) 85
AspS9I GGNCC 1 cut(s) 192
AvaII GGWCC 1 cut(s) 192
BccI CCATC 3 cut(s) 183, 317, 335
BcoDI GTCTC 1 cut(s) 310
Bme18I GGWCC 1 cut(s) 192
BmgT120I GGNCC 1 cut(s) 192
BsaJI CCNNGG 1 cut(s) 53
Bsc4I CCNNNNNNNGG 2 cut(s) 59, 297
Bse1I ACTGG 1 cut(s) 324
Bse3DI GCAATG 1 cut(s) 93
BseDI CCNNGG 1 cut(s) 53
BseGI GGATG 2 cut(s) 194, 328
BseLI CCNNNNNNNGG 2 cut(s) 59, 297
BseMI GCAATG 1 cut(s) 93
BseNI ACTGG 1 cut(s) 324
BshFI GGCC 1 cut(s) 17
BslFI GGGAC 1 cut(s) 35
BslI CCNNNNNNNGG 2 cut(s) 59, 297
BsmAI GTCTC 1 cut(s) 310
BsmFI GGGAC 1 cut(s) 35
BsnI GGCC 1 cut(s) 17
Bsp143I GATC 1 cut(s) 153
BspACI CCGC 1 cut(s) 291
BspANI GGCC 1 cut(s) 17
BspQI GCTCTTC 1 cut(s) 92
BsrDI GCAATG 1 cut(s) 93
BsrI ACTGG 1 cut(s) 324
BssECI CCNNGG 1 cut(s) 53
BssMI GATC 1 cut(s) 153
BssT1I CCWWGG 1 cut(s) 53
Bst6I CTCTTC 1 cut(s) 92
BstC8I GCNNGC 1 cut(s) 15
BstENI CCTNNNNNAGG 1 cut(s) 57
BstF5I GGATG 2 cut(s) 194, 328
BstHHI GCGC 1 cut(s) 85
BstKTI GATC 1 cut(s) 156
BstMAI GTCTC 1 cut(s) 310
BstMBI GATC 1 cut(s) 153
BstMWI GCNNNNNNNGC 3 cut(s) 89, 104, 307
BsuRI GGCC 1 cut(s) 17
BtsCI GGATG 2 cut(s) 194, 328
Cac8I GCNNGC 1 cut(s) 15
CfoI GCGC 1 cut(s) 85
Cfr13I GGNCC 1 cut(s) 192
CviAII CATG 1 cut(s) 73
CviJI RGCY 4 cut(s) 17, 70, 107, 301
CviKI_1 RGCY 4 cut(s) 17, 70, 107, 301
DpnI GATC 1 cut(s) 155
DpnII GATC 1 cut(s) 153
Eam1104I CTCTTC 1 cut(s) 92
EarI CTCTTC 1 cut(s) 92
Eco130I CCWWGG 1 cut(s) 53
Eco47I GGWCC 1 cut(s) 192
EcoNI CCTNNNNNAGG 1 cut(s) 57
EcoRI GAATTC 2 cut(s) 223, 231
EcoT14I CCWWGG 1 cut(s) 53
ErhI CCWWGG 1 cut(s) 53
FaeI CATG 1 cut(s) 76
FaiI YATR 4 cut(s) 20, 74, 150, 257
FalI AAGNNNNNCTT 2 cut(s) 111, 143
FaqI GGGAC 1 cut(s) 35
FatI CATG 1 cut(s) 72
FokI GGATG 2 cut(s) 201, 335
GlaI GCGC 1 cut(s) 84
HaeIII GGCC 1 cut(s) 17
HhaI GCGC 1 cut(s) 85
Hin1II CATG 1 cut(s) 76
Hin6I GCGC 1 cut(s) 83
HinP1I GCGC 1 cut(s) 83
Hpy188I TCNGA 1 cut(s) 274
Hpy188III TCNNGA 3 cut(s) 157, 228, 236
Hpy99I CGWCG 1 cut(s) 316
HpyCH4V TGCA 1 cut(s) 212
HpyF10VI GCNNNNNNNGC 3 cut(s) 89, 104, 307
Hsp92II CATG 1 cut(s) 76
HspAI GCGC 1 cut(s) 83
Kzo9I GATC 1 cut(s) 153
LguI GCTCTTC 1 cut(s) 92
LpnPI CCDG 3 cut(s) 213, 221, 305
MalI GATC 1 cut(s) 155
MboI GATC 1 cut(s) 153
MboII GAAGA 3 cut(s) 79, 119, 191
MluCI AATT 2 cut(s) 223, 231
MmeI TCCRAC 1 cut(s) 166
MnlI CCTC 1 cut(s) 153
MseI TTAA 1 cut(s) 332
MwoI GCNNNNNNNGC 3 cut(s) 89, 104, 307
NdeII GATC 1 cut(s) 153
NlaIII CATG 1 cut(s) 76
PciSI GCTCTTC 1 cut(s) 92
PspPI GGNCC 1 cut(s) 192
SapI GCTCTTC 1 cut(s) 92
SaqAI TTAA 1 cut(s) 332
Sau3AI GATC 1 cut(s) 153
Sau96I GGNCC 1 cut(s) 192
SetI ASST 1 cut(s) 109
SinI GGWCC 1 cut(s) 192
Sse9I AATT 2 cut(s) 223, 231
SsiI CCGC 1 cut(s) 291
StyI CCWWGG 1 cut(s) 53
TasI AATT 2 cut(s) 223, 231
Tru1I TTAA 1 cut(s) 332
Tru9I TTAA 1 cut(s) 332
TspDTI ATGAA 2 cut(s) 54, 152
VpaK11BI GGWCC 1 cut(s) 192
XagI CCTNNNNNAGG 1 cut(s) 57
XapI RAATTY 2 cut(s) 223, 231
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.