Rh7DG104700

Transmembrane protein 205

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0003018
Physical Location & Seq
Forward (+)
8904516 .. 8905290
775 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG104700.1

Sequence Viewer

Length: 375 bp
ATGCATTGCTCTGCTAAATCCCTAAAAATTTTGGGAATTGGAATCTTCATAGACAAATTTGAGGTATGGCTGTCTCGATTTCTAGTAGCTATGGGCTTTCTAGCCATCAGAGTGATTTTCTCACAGGAGACCAAATCGGACGGTCCCAAGTCGTCGGCACTCTCCACCACCCTGAAGCTGGCTCATCTGCTCAACTTCTTCACGGCGTTCGGCGCCTATCTCAAGGTCACCTTCCTCGGTGACACCATCATGTTCAAGACTCTTCTGAGGCATCAGCTCTGTAATCTGCAAAGCAAGATGCTTCCATCTTATTTCACAATGGTGGGGATTTGTTGTGCAATATCAGTAGCTTTATTTGGGTATTTGTATCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4149

Protein Analysis

124

Amino Acids

13.86

Weight (kDa)

9.48

Isoelectric Point (pI)

26.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4149 PF13664 67 - 120 1.4e-08 Domain of unknown function (DUF4149)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 212
AcsI RAATTY 2 cut(s) 27, 56
AcuI CTGAAG 1 cut(s) 194
AcyI GRCGYC 1 cut(s) 213
AfiI CCNNNNNNNGG 1 cut(s) 178
AgsI TTSAA 1 cut(s) 256
AleI CACNNNNGTG 1 cut(s) 320
AluBI AGCT 4 cut(s) 89, 178, 277, 350
AluI AGCT 4 cut(s) 89, 178, 277, 350
Alw26I GTCTC 2 cut(s) 78, 122
ApoI RAATTY 2 cut(s) 27, 56
AspLEI GCGC 1 cut(s) 215
AspS9I GGNCC 1 cut(s) 143
AsuHPI GGTGA 2 cut(s) 220, 251
AvaII GGWCC 1 cut(s) 143
BanI GGYRCC 1 cut(s) 212
BccI CCATC 3 cut(s) 113, 254, 313
BceAI ACGGC 1 cut(s) 219
BcoDI GTCTC 2 cut(s) 78, 122
BfaI CTAG 2 cut(s) 83, 101
BfoI RGCGCY 1 cut(s) 216
Bme18I GGWCC 1 cut(s) 143
BmgT120I GGNCC 1 cut(s) 143
BmiI GGNNCC 2 cut(s) 145, 214
BmsI GCATC 2 cut(s) 280, 288
BpuEI CTTGAG 1 cut(s) 206
BsaHI GRCGYC 1 cut(s) 213
BsaI GGTCTC 1 cut(s) 122
BsaJI CCNNGG 1 cut(s) 235
Bsc4I CCNNNNNNNGG 1 cut(s) 178
Bse3DI GCAATG 1 cut(s) 4
BseDI CCNNGG 1 cut(s) 235
BseLI CCNNNNNNNGG 1 cut(s) 178
BseMI GCAATG 1 cut(s) 4
BseMII CTCAG 1 cut(s) 257
BshNI GGYRCC 1 cut(s) 212
BslFI GGGAC 1 cut(s) 129
BslI CCNNNNNNNGG 1 cut(s) 178
BsmAI GTCTC 2 cut(s) 78, 122
BsmFI GGGAC 1 cut(s) 129
Bso31I GGTCTC 1 cut(s) 122
BspCNI CTCAG 1 cut(s) 258
BspLI GGNNCC 2 cut(s) 145, 214
BspT107I GGYRCC 1 cut(s) 212
BspTNI GGTCTC 1 cut(s) 122
BsrDI GCAATG 1 cut(s) 4
BssECI CCNNGG 1 cut(s) 235
BssNI GRCGYC 1 cut(s) 213
Bst4CI ACNGT 1 cut(s) 143
Bst6I CTCTTC 1 cut(s) 267
BstACI GRCGYC 1 cut(s) 213
BstC8I GCNNGC 1 cut(s) 180
BstDEI CTNAG 1 cut(s) 266
BstEII GGTNACC 1 cut(s) 226
BstH2I RGCGCY 1 cut(s) 216
BstHHI GCGC 1 cut(s) 215
BstMAI GTCTC 2 cut(s) 78, 122
BstMWI GCNNNNNNNGC 1 cut(s) 212
BstPI GGTNACC 1 cut(s) 226
Cac8I GCNNGC 1 cut(s) 180
CfoI GCGC 1 cut(s) 215
Cfr13I GGNCC 1 cut(s) 143
CviAII CATG 2 cut(s) 250, 372
CviJI RGCY 8 cut(s) 70, 89, 96, 104, 178, 182, 277, 350
CviKI_1 RGCY 8 cut(s) 70, 89, 96, 104, 178, 182, 277, 350
DdeI CTNAG 1 cut(s) 266
DinI GGCGCC 1 cut(s) 214
Eam1104I CTCTTC 1 cut(s) 267
EarI CTCTTC 1 cut(s) 267
Eco31I GGTCTC 1 cut(s) 122
Eco47I GGWCC 1 cut(s) 143
Eco57I CTGAAG 1 cut(s) 194
Eco91I GGTNACC 1 cut(s) 226
EcoO65I GGTNACC 1 cut(s) 226
EcoT22I ATGCAT 1 cut(s) 6
EgeI GGCGCC 1 cut(s) 214
EheI GGCGCC 1 cut(s) 214
FaeI CATG 2 cut(s) 253, 375
FaiI YATR 5 cut(s) 50, 67, 92, 251, 373
FalI AAGNNNNNCTT 2 cut(s) 215, 247
FaqI GGGAC 1 cut(s) 129
FatI CATG 2 cut(s) 249, 371
FspBI CTAG 2 cut(s) 83, 101
GlaI GCGC 1 cut(s) 214
HaeII RGCGCY 1 cut(s) 216
HhaI GCGC 1 cut(s) 215
Hin1I GRCGYC 1 cut(s) 213
Hin1II CATG 2 cut(s) 253, 375
Hin6I GCGC 1 cut(s) 213
HinP1I GCGC 1 cut(s) 213
HinfI GANTC 2 cut(s) 42, 259
HphI GGTGA 2 cut(s) 220, 251
Hpy188I TCNGA 3 cut(s) 110, 139, 267
Hpy188III TCNNGA 2 cut(s) 75, 256
Hpy99I CGWCG 1 cut(s) 157
HpyAV CCTTC 1 cut(s) 241
HpyCH4III ACNGT 1 cut(s) 143
HpyCH4V TGCA 3 cut(s) 4, 289, 338
HpyF10VI GCNNNNNNNGC 1 cut(s) 212
HpyF3I CTNAG 1 cut(s) 266
Hsp92I GRCGYC 1 cut(s) 213
Hsp92II CATG 2 cut(s) 253, 375
HspAI GCGC 1 cut(s) 213
KasI GGCGCC 1 cut(s) 212
LpnPI CCDG 3 cut(s) 110, 164, 185
LweI GCATC 2 cut(s) 280, 288
MaeI CTAG 2 cut(s) 83, 101
MaeIII GTNAC 2 cut(s) 226, 239
MboII GAAGA 3 cut(s) 37, 190, 254
MluCI AATT 3 cut(s) 27, 36, 56
Mly113I GGCGCC 1 cut(s) 213
MlyI GAGTC 1 cut(s) 253
MnlI CCTC 3 cut(s) 55, 245, 261
Mph1103I ATGCAT 1 cut(s) 6
MslI CAYNNNNRTG 3 cut(s) 110, 248, 320
MwoI GCNNNNNNNGC 1 cut(s) 212
NarI GGCGCC 1 cut(s) 213
NlaIII CATG 2 cut(s) 253, 375
NlaIV GGNNCC 2 cut(s) 145, 214
NmuCI GTSAC 2 cut(s) 226, 239
NsiI ATGCAT 1 cut(s) 6
OliI CACNNNNGTG 1 cut(s) 320
PfeI GAWTC 1 cut(s) 42
PleI GAGTC 1 cut(s) 253
PluTI GGCGCC 1 cut(s) 216
PpsI GAGTC 1 cut(s) 253
PspEI GGTNACC 1 cut(s) 226
PspN4I GGNNCC 2 cut(s) 145, 214
PspPI GGNCC 1 cut(s) 143
RseI CAYNNNNRTG 3 cut(s) 110, 248, 320
Sau96I GGNCC 1 cut(s) 143
SchI GAGTC 1 cut(s) 253
SetI ASST 7 cut(s) 66, 91, 180, 228, 233, 279, 352
SfaNI GCATC 2 cut(s) 280, 288
SfoI GGCGCC 1 cut(s) 214
SinI GGWCC 1 cut(s) 143
SmiMI CAYNNNNRTG 3 cut(s) 110, 248, 320
SmlI CTYRAG 1 cut(s) 221
SmoI CTYRAG 1 cut(s) 221
Sse9I AATT 3 cut(s) 27, 36, 56
SspDI GGCGCC 1 cut(s) 212
SspMI CTAG 2 cut(s) 83, 101
TaaI ACNGT 1 cut(s) 143
TaqI TCGA 1 cut(s) 76
TasI AATT 3 cut(s) 27, 36, 56
TfiI GAWTC 1 cut(s) 42
TseFI GTSAC 2 cut(s) 226, 239
Tsp45I GTSAC 2 cut(s) 226, 239
TspDTI ATGAA 1 cut(s) 37
VpaK11BI GGWCC 1 cut(s) 143
XapI RAATTY 2 cut(s) 27, 56
XcmI CCANNNNNNNNNTGG 1 cut(s) 175
XspI CTAG 2 cut(s) 83, 101
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.