Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0002414

Physical Location & Seq

Genomic Coordinates Reverse (-)

9858406 .. 9864855

Gene Structure 6450 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000006709

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2580 bp

ATGGAAAAAGGGTTGTTGTTAAAGGAAACGGAGGAGAAGAACAAAGAAGAAGGTGGTTATCAAAGATGTGGTGGGTTTGCTGGAGAAGTGAAGAGGTTGGGTTACATAGCAGGGCCTATGGTGGCCGTGAATCTGTCACAGTACTTTCTGCAGATCATTTCGATCATGATGGTTGGTCATTTGGGTAAACTCTCTCTTTCCAGCACTGCTATTGCCATCTCCTTCTGTGCCGTCTCCGGCTTCAGTCTTATTTTCGGGATGGCCTGTGCACTTGAAACTCTCTCCGGGCAAGCATATGGAGCTCAGCAGTATCGACAGCTAGGACTTCATATAAGCACTGCTATCTTCTCTCTAATGCTAGTTTGTCTCCCTCTGTCTCTTGTGTGGATCTACATGGAGAAGATACTAATGTTGTTGGGCCAAGACCCTCTAATTTCGCATGAAGCGGGTAAGTTTGCAAGGATGCTCTTACCTGCACTCTATGCTTATGCAGCTCTTCAGCCACTTTGTAAATATCTCCAGACACAAAGCTTAATCGTTCCATTGCTTTTAAGCTCTTGCGCCTCTGTGTGTTTCCATGTACTTGTCTGCTGGGTTTTGGTGTTCAAGTCTGGACTAGGAAACCTTGGAGCAGCTTTAGCCATTGGTATGTCTTATTGGTTGAATGTGGTTCTGCTCGTACTATATGTGAAGTACTCCAGCGCCTGTGCACATACCAGGTTTCAAATTTCTTTTGAAGTATTTCAAGGCATTGGAGAGTTCTTACGTTTTGCTATTCCATCTGCTGTTATGATTTGCCTTGAATGGTGGTCATTTGAGCTCCTTACCTTGATGGCTGGTTTTCTAGCAAATCCGGAGCTTGAAACTTCAGTTTTATCTGTTTGTTTGTCAACTATCTCATCACTGTATACAATTCCAGAAGCACTTGGTGCCGCAGTAAGTACTAGAGTTTCAAATGAACTTGGAGCTGGGAATCCACAAGCAGCTCGATTAGCTGTTGTTGCTTCTATGTTCCTAACCATCTCAGAGTCAGTCATTATAAGCTCAACCGTCTTTGCCAGTCGATCTGTTTTTGGCTACGTTTTCAGCAATGAGAAGGTAGTTGTGGATTATGTCACTTCCATTGCTCCTCTGGTTTGTCTATCAGTTATACCAGACAGCTTACATGCGGTTCTTTCTGGTATTGCTAGGGGATCTGGTTGGCAGGACTTGGCAATGTATGTCAACCTCGGATCTTACTATCTTGTTGGGATTCCGGTTGCTGCCACATTGGGTTTCTGGTTCGACTTCAGAGGAAGAGGCCTTTGGATTGGAATACTAGTCGGTTCTTTTCTGCAAGCAGCCCTTTATTCTATCATAACAAGTTGTACGAACTGGGAAGAAAAGGCAAAGAAGGCGAGGGAGAGGATATTCAACGAAACAGCGTTATTCCTTCTTCTTCATAAAACCCCAAACCCTGAGAGCTCTAGCTGTTTCAGCAGTAGCACCAATTCCTCCTCCGCAGAAATGGGTAGAGCCGAGAAAGAGCAACTGAACCGAACTCTGAACCAGCACCTCAACACCGTACATGAAATCTTAGAGGTGTTGGATCAAAACCCACCTTCTACACTTGAGAAGGTGAGCTGGGAAGAGGTCGTCCAGATGGGTAACCAAGTCTCCAAACAAGCCACCATTGTTGGAATGATTTGGAGTGGAGAAAGAGTAGAAGCTAGAGTGCTTGAAGAAAACATGACTGCCTACTTTAATATGCTACAAGGTTTTCTTCTTCTTTCACATGGGAGTATGGTTGGTGCAGGGCCTACTCTTTCTTCTTGTGTCCGCGCATCTGTAAAGCAAGTTGTTGACTCCAGTTTTAAGTTGATGAAGGAATCTATCTCATTGTATGGAGCAGTGAATAAAGACTGGAAACTGTCGATTCCACAGTTGGCTGGTGCAGTATGGGAAGCCTGTTCTGCTCTTAAGAAGACCCCTGCCACAAATGTCACAGCAATTGGGCGAGCAATGACGCAGGTTGCAGTCACCATGAAAGATGTACTTCGTGAGATGAAGGAGCTTAAGCCAGCTACTGACCCAACAGAAGATGAGACTGAAGCAGAAATTGAGCCCCATGATGATGAAACTTCGAGTGATAGTGATCTGGGAAATGACTTGTCACCTGAAGAGATGAAAGTTGCTGAGCTAGCAATTGCAGCCGTGTCTGAGACTCTTGTAGTGATAAAGGAACTAATTCGAACCATCACAAGTTTGCTTAAACGGGAAAGTCCAAATGACAGTAGTCTTGTGGATTCTCTGGAGAAACTATTGAAGATGTGTCAAGGAATTGGAGAACAGATAGAAGAGCTTGGAGCTTGTCTCTACCCCCCGCAAGAGGTTCCCACTATCAAGGCAGTATTGGAGAAAATGTCGAGCCTTACTGATGACATGAAAGCTGAATTACGGAGTCTTCAAGAAAATTTGGAAGCTTTTTGTCAGGCATGCGATTGTTTGAAGCGTTCATTGAGACAGCTTGAATCTGCACTAGATTGTCCAACAATTATTGGTTTAGAAACCAGAGTGCAGAAGATTGATTTGAACAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

860

Amino Acids

93.83

Weight (kDa)

5.19

Isoelectric Point (pI)

39.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MatE	PF01554	39 - 199	1.1e-27	MatE
MatE	PF01554	260 - 422	1.3e-27	MatE
GCIP_N	PF13324	544 - 687	1.7e-46	Grap2 and cyclin-D-interacting, N-terminal
GCIP_C	PF20936	704 - 808	1.6e-24	Grap2 and cyclin-D-interacting, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002414)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22970 AT1G22970 AT1G22970 AT1G22970 AT1G22980 AT1G22980 AT1G71150 AT1G71150
fragaria_vesca	FvH4_4g26370 FvH4_4g26370 FvH4_4g26370 FvH4_4g26380
malus_domestica	MD13G1032100.v1.1 MD14G1231700.v1.1
prunus_persica	Prupe.1G320100_v2.0.a1 Prupe.1G320200_v2.0.a1
pyrus_communis	pycom13g02810 pycom16g02930
rosa_chinensis	RchiOBHm_Chr4g0403431 RchiOBHm_Chr4g0434001 RchiOBHm_Chr4g0434011 RchiOBHm_Chr7g0223611
rosa_laevigata	RLG00000006709
rosa_multiflora	Rmu_co8474767.1_g000001 Rmu_sc0000352.1_g000023 Rmu_sc0002775.1_g000039
rosa_roxburghii	Rroxscaffold_5G00375410 Rroxscaffold_5G00375420
rosa_rugosa	Rorug04G0272600
rosa_samantha	Rh2AG359200 Rh2CG573900 Rh4AG328100 Rh4AG328300 Rh4BG335500 Rh4BG335600 Rh4CG351000 Rh4CG351100 Rh4DG332000 Rh5AG338400
rosa_wichuraiana	Rw4G028450 Rw4G028460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1040
Acc36I	ACCTGC	2 cut(s)	481, 1999
AccB1I	GGYRCC	1 cut(s)	929
AccI	GTMKAC	1 cut(s)	908
AccII	CGCG	1 cut(s)	1821
AccIII	TCCGGA	1 cut(s)	853
AciI	CCGC	6 cut(s)	446, 933, 1169, 1500, 1819, 2363
AclWI	GGATC	4 cut(s)	395, 1201, 1240, 1596
AcoI	YGGCCR	1 cut(s)	123
AcsI	RAATTY	2 cut(s)	726, 2452
AcuI	CTGAAG	6 cut(s)	226, 482, 852, 1273, 2109, 2178
AdeI	CACNNNGTG	1 cut(s)	929
AfaI	GTAC	8 cut(s)	143, 582, 681, 695, 943, 1369, 1566, 2034
AfiI	CCNNNNNNNGG	1 cut(s)	2368
AflII	CTTAAG	2 cut(s)	1958, 2054
AhlI	ACTAGT	1 cut(s)	1318
AjnI	CCWGG	1 cut(s)	716
AjuI	GAANNNNNNNTTGG	2 cut(s)	1288, 1320
Alw21I	GWGCWC	5 cut(s)	271, 304, 712, 822, 1466
Alw26I	GTCTC	8 cut(s)	238, 371, 381, 1660, 2078, 2195, 2357, 2494
Alw44I	GTGCAC	2 cut(s)	267, 708
AlwI	GGATC	4 cut(s)	395, 1201, 1240, 1596
AlwNI	CAGNNNCTG	2 cut(s)	705, 2066
Aor13HI	TCCGGA	1 cut(s)	853
AoxI	GGCC	6 cut(s)	113, 123, 261, 418, 1300, 1796
ApaLI	GTGCAC	2 cut(s)	267, 708
ApeKI	GCWGC	6 cut(s)	491, 632, 983, 1262, 1340, 2189
ApoI	RAATTY	2 cut(s)	726, 2452
Asp700I	GAANNNNTTC	2 cut(s)	741, 2226
AspLEI	GCGC	3 cut(s)	563, 704, 1823
AspS9I	GGNCC	3 cut(s)	113, 418, 1796
AsuC2I	CCSGG	1 cut(s)	286
AsuHPI	GGTGA	3 cut(s)	1630, 2011, 2145
AsuII	TTCGAA	1 cut(s)	2230
AsuNHI	GCTAGC	1 cut(s)	2179
BaeGI	GKGCMC	2 cut(s)	271, 712
BaeI	ACNNNNGTAYC	2 cut(s)	395, 428
BanI	GGYRCC	1 cut(s)	929
BanII	GRGCYC	4 cut(s)	304, 822, 1466, 2106
BbsI	GAAGAC	2 cut(s)	1970, 2435
Bbv12I	GWGCWC	5 cut(s)	271, 304, 712, 822, 1466
BbvI	GCAGC	6 cut(s)	503, 644, 995, 1249, 1352, 2201
BccI	CCATC	8 cut(s)	163, 224, 253, 787, 826, 1028, 1636, 2243
BceAI	ACGGC	3 cut(s)	110, 215, 2177
BciT130I	CCWGG	1 cut(s)	718
BcnI	CCSGG	1 cut(s)	286
BcoDI	GTCTC	8 cut(s)	238, 371, 381, 1660, 2078, 2195, 2357, 2494
BcuI	ACTAGT	1 cut(s)	1318
BfmI	CTRYAG	1 cut(s)	149
BfoI	RGCGCY	1 cut(s)	705
BfrI	CTTAAG	2 cut(s)	1958, 2054
BfuAI	ACCTGC	2 cut(s)	481, 1999
BisI	GCNGC	7 cut(s)	492, 633, 933, 984, 1263, 1341, 2190
BlpI	GCTNAGC	2 cut(s)	303, 2175
BlsI	GCNGC	7 cut(s)	493, 634, 934, 985, 1264, 1342, 2191
BmcAI	AGTACT	3 cut(s)	143, 695, 943
Bme1390I	CCNGG	2 cut(s)	286, 718
BmgT120I	GGNCC	3 cut(s)	113, 418, 1796
BmiI	GGNNCC	2 cut(s)	931, 2373
BmrFI	CCNGG	2 cut(s)	286, 718
BmrI	ACTGGG	1 cut(s)	1384
BmsI	GCATC	2 cut(s)	453, 1832
BmtI	GCTAGC	1 cut(s)	2183
BmuI	ACTGGG	1 cut(s)	1384
BoxI	GACNNNNGTC	1 cut(s)	2274
BpiI	GAAGAC	2 cut(s)	1970, 2435
BplI	GAGNNNNNCTC	2 cut(s)	2337, 2369
BpmI	CTGGAG	5 cut(s)	102, 503, 682, 1831, 2312
Bpu1102I	GCTNAGC	2 cut(s)	303, 2175
Bpu14I	TTCGAA	1 cut(s)	2230
BpuEI	CTTGAG	1 cut(s)	1631
BpuMI	CCSGG	1 cut(s)	286
BsaBI	GATNNNNATC	1 cut(s)	2133
BsaJI	CCNNGG	2 cut(s)	625, 1228
BsaWI	WCCGGW	2 cut(s)	853, 1255
BsaXI	ACNNNNNCTCC	6 cut(s)	1640, 1670, 1686, 1716, 2387, 2417
Bsc4I	CCNNNNNNNGG	1 cut(s)	2368
Bse1I	ACTGG	4 cut(s)	1059, 1379, 1848, 1907
Bse3DI	GCAATG	5 cut(s)	542, 1096, 1122, 1221, 2007
Bse8I	GATNNNNATC	1 cut(s)	2133
BseAI	TCCGGA	1 cut(s)	853
BseBI	CCWGG	1 cut(s)	718
BseDI	CCNNGG	2 cut(s)	625, 1228
BseGI	GGATG	2 cut(s)	264, 468
BseJI	GATNNNNATC	1 cut(s)	2133
BseLI	CCNNNNNNNGG	1 cut(s)	2368
BseMI	GCAATG	5 cut(s)	542, 1096, 1122, 1221, 2007
BseMII	CTCAG	5 cut(s)	317, 1038, 1449, 2166, 2190
BseNI	ACTGG	4 cut(s)	1059, 1379, 1848, 1907
BseRI	GAGGAG	3 cut(s)	47, 1119, 1486
BseSI	GKGCMC	2 cut(s)	271, 712
BseXI	GCAGC	6 cut(s)	503, 644, 995, 1249, 1352, 2201
BseYI	CCCAGC	3 cut(s)	591, 968, 1623
BsgI	GTGCAG	5 cut(s)	459, 1812, 1953, 2499, 2576
Bsh1236I	CGCG	1 cut(s)	1821
BshFI	GGCC	6 cut(s)	115, 125, 263, 420, 1302, 1798
BshNI	GGYRCC	1 cut(s)	929
BsiHKAI	GWGCWC	5 cut(s)	271, 304, 712, 822, 1466
BsiSI	CCGG	4 cut(s)	237, 285, 854, 1256
BslI	CCNNNNNNNGG	1 cut(s)	2368
BsmAI	GTCTC	8 cut(s)	238, 371, 381, 1660, 2078, 2195, 2357, 2494
BsmBI	CGTCTC	1 cut(s)	238
BsnI	GGCC	6 cut(s)	115, 125, 263, 420, 1302, 1798
Bsp119I	TTCGAA	1 cut(s)	2230
Bsp1286I	GDGCHC	6 cut(s)	271, 304, 712, 822, 1466, 2106
Bsp13I	TCCGGA	1 cut(s)	853
Bsp143I	GATC	8 cut(s)	153, 162, 387, 1064, 1193, 1232, 1588, 2134
Bsp1720I	GCTNAGC	2 cut(s)	303, 2175
BspACI	CCGC	6 cut(s)	446, 933, 1169, 1500, 1819, 2363
BspANI	GGCC	6 cut(s)	115, 125, 263, 420, 1302, 1798
BspCNI	CTCAG	5 cut(s)	316, 1037, 1450, 2167, 2191
BspEI	TCCGGA	1 cut(s)	853
BspFNI	CGCG	1 cut(s)	1821
BspHI	TCATGA	1 cut(s)	165
BspLI	GGNNCC	2 cut(s)	931, 2373
BspMAI	CTGCAG	1 cut(s)	153
BspMI	ACCTGC	2 cut(s)	481, 1999
BspOI	GCTAGC	1 cut(s)	2183
BspPI	GGATC	4 cut(s)	395, 1201, 1240, 1596
BspQI	GCTCTTC	2 cut(s)	501, 2331
BspT104I	TTCGAA	1 cut(s)	2230
BspT107I	GGYRCC	1 cut(s)	929
BspTI	CTTAAG	2 cut(s)	1958, 2054
BsrDI	GCAATG	5 cut(s)	542, 1096, 1122, 1221, 2007
BsrI	ACTGG	4 cut(s)	1059, 1379, 1848, 1907
BssECI	CCNNGG	2 cut(s)	625, 1228
BssMI	GATC	8 cut(s)	153, 162, 387, 1064, 1193, 1232, 1588, 2134
BssNAI	GTATAC	1 cut(s)	909
BssT1I	CCWWGG	1 cut(s)	625
Bst1107I	GTATAC	1 cut(s)	909
Bst2UI	CCWGG	1 cut(s)	718
Bst4CI	ACNGT	7 cut(s)	141, 906, 1051, 1564, 1911, 1923, 2273
Bst6I	CTCTTC	6 cut(s)	86, 501, 1291, 1623, 2154, 2331
BstAFI	CTTAAG	2 cut(s)	1958, 2054
BstAPI	GCANNNNNTGC	2 cut(s)	482, 929
BstBI	TTCGAA	1 cut(s)	2230
BstC8I	GCNNGC	6 cut(s)	291, 1338, 1998, 2061, 2181, 2476
BstDEI	CTNAG	6 cut(s)	303, 1024, 1458, 1576, 2175, 2199
BstEII	GGTNACC	1 cut(s)	1646
BstF5I	GGATG	2 cut(s)	264, 468
BstFNI	CGCG	1 cut(s)	1821
BstH2I	RGCGCY	1 cut(s)	705
BstHHI	GCGC	3 cut(s)	563, 704, 1823
BstKTI	GATC	8 cut(s)	156, 165, 390, 1067, 1196, 1235, 1591, 2137
BstMAI	GTCTC	8 cut(s)	238, 371, 381, 1660, 2078, 2195, 2357, 2494
BstMBI	GATC	8 cut(s)	153, 162, 387, 1064, 1193, 1232, 1588, 2134
BstNI	CCWGG	1 cut(s)	718
BstNSI	RCATGY	2 cut(s)	1169, 2478
BstPAI	GACNNNNGTC	1 cut(s)	2274
BstPI	GGTNACC	1 cut(s)	1646
BstSCI	CCNGG	2 cut(s)	284, 716
BstSFI	CTRYAG	1 cut(s)	149
BstSLI	GKGCMC	2 cut(s)	271, 712
BstUI	CGCG	1 cut(s)	1821
BstV1I	GCAGC	6 cut(s)	503, 644, 995, 1249, 1352, 2201
BstV2I	GAAGAC	2 cut(s)	1970, 2435
BstX2I	RGATCY	3 cut(s)	387, 1193, 1232
BstYI	RGATCY	3 cut(s)	387, 1193, 1232
BstZ17I	GTATAC	1 cut(s)	909
BsuRI	GGCC	6 cut(s)	115, 125, 263, 420, 1302, 1798
BtsCI	GGATG	2 cut(s)	264, 468
BtsI	GCAGTG	3 cut(s)	204, 336, 1896
BtsIMutI	CAGTG	4 cut(s)	204, 336, 902, 1896
BveI	ACCTGC	2 cut(s)	481, 1999
Cac8I	GCNNGC	6 cut(s)	291, 1338, 1998, 2061, 2181, 2476
CaiI	CAGNNNCTG	2 cut(s)	705, 2066
CciI	TCATGA	1 cut(s)	165
CfoI	GCGC	3 cut(s)	563, 704, 1823
Cfr13I	GGNCC	3 cut(s)	113, 418, 1796
CseI	GACGC	1 cut(s)	2014
CsiI	ACCWGGT	1 cut(s)	716
Csp6I	GTAC	8 cut(s)	142, 581, 680, 694, 942, 1368, 1565, 2033
CspCI	CAANNNNNGTGG	2 cut(s)	1657, 1692
CviQI	GTAC	8 cut(s)	142, 581, 680, 694, 942, 1368, 1565, 2033
DdeI	CTNAG	6 cut(s)	303, 1024, 1458, 1576, 2175, 2199
DpnI	GATC	8 cut(s)	155, 164, 389, 1066, 1195, 1234, 1590, 2136
DpnII	GATC	8 cut(s)	153, 162, 387, 1064, 1193, 1232, 1588, 2134
DraIII	CACNNNGTG	1 cut(s)	929
EaeI	YGGCCR	1 cut(s)	123
Eam1104I	CTCTTC	6 cut(s)	86, 501, 1291, 1623, 2154, 2331
EarI	CTCTTC	6 cut(s)	86, 501, 1291, 1623, 2154, 2331
Ecl136II	GAGCTC	3 cut(s)	302, 820, 1464
Eco130I	CCWWGG	1 cut(s)	625
Eco147I	AGGCCT	1 cut(s)	1302
Eco24I	GRGCYC	4 cut(s)	304, 822, 1466, 2106
Eco53kI	GAGCTC	3 cut(s)	302, 820, 1464
Eco57I	CTGAAG	6 cut(s)	226, 482, 852, 1273, 2109, 2178
Eco91I	GGTNACC	1 cut(s)	1646
EcoICRI	GAGCTC	3 cut(s)	302, 820, 1464
EcoO109I	RGGNCCY	2 cut(s)	113, 1796
EcoO65I	GGTNACC	1 cut(s)	1646
EcoRII	CCWGG	1 cut(s)	716
EcoT14I	CCWWGG	1 cut(s)	625
EcoT38I	GRGCYC	4 cut(s)	304, 822, 1466, 2106
ErhI	CCWWGG	1 cut(s)	625
Esp3I	CGTCTC	1 cut(s)	238
FalI	AAGNNNNNCTT	6 cut(s)	1329, 1361, 1746, 1778, 2019, 2051
FauI	CCCGC	2 cut(s)	439, 2370
FauNDI	CATATG	1 cut(s)	295
FblI	GTMKAC	1 cut(s)	908
Fnu4HI	GCNGC	7 cut(s)	492, 633, 933, 984, 1263, 1341, 2190
FokI	GGATG	2 cut(s)	271, 475
FriOI	GRGCYC	4 cut(s)	304, 822, 1466, 2106
Fsp4HI	GCNGC	7 cut(s)	492, 633, 933, 984, 1263, 1341, 2190
GlaI	GCGC	3 cut(s)	562, 703, 1822
GluI	GCNGC	7 cut(s)	492, 633, 933, 984, 1263, 1341, 2190
GsaI	CCCAGC	3 cut(s)	595, 972, 1627
GsuI	CTGGAG	5 cut(s)	102, 503, 682, 1831, 2312
HaeII	RGCGCY	1 cut(s)	705
HaeIII	GGCC	6 cut(s)	115, 125, 263, 420, 1302, 1798
HapII	CCGG	4 cut(s)	237, 285, 854, 1256
HgaI	GACGC	1 cut(s)	2014
HhaI	GCGC	3 cut(s)	563, 704, 1823
Hin6I	GCGC	3 cut(s)	561, 702, 1821
HinP1I	GCGC	3 cut(s)	561, 702, 1821
HincII	GTYRAC	3 cut(s)	891, 1225, 1843
HindII	GTYRAC	3 cut(s)	891, 1225, 1843
HindIII	AAGCTT	2 cut(s)	529, 2460
HpaII	CCGG	4 cut(s)	237, 285, 854, 1256
HphI	GGTGA	3 cut(s)	1630, 2011, 2145
Hpy166II	GTNNAC	7 cut(s)	188, 269, 710, 891, 909, 1225, 1843
Hpy188I	TCNGA	5 cut(s)	1027, 1232, 1292, 1545, 2200
Hpy8I	GTNNAC	7 cut(s)	188, 269, 710, 891, 909, 1225, 1843
HpyAV	CCTTC	9 cut(s)	44, 232, 1090, 1387, 1442, 1609, 1611, 1858, 2041
HpyCH4III	ACNGT	7 cut(s)	141, 906, 1051, 1564, 1911, 1923, 2273
HpyCH4IV	ACGT	2 cut(s)	766, 1080
HpyF3I	CTNAG	6 cut(s)	303, 1024, 1458, 1576, 2175, 2199
HpySE526I	ACGT	2 cut(s)	766, 1080
HspAI	GCGC	3 cut(s)	561, 702, 1821
Kpn2I	TCCGGA	1 cut(s)	853
Kzo9I	GATC	8 cut(s)	153, 162, 387, 1064, 1193, 1232, 1588, 2134
LguI	GCTCTTC	2 cut(s)	501, 2331
LmnI	GCTCC	9 cut(s)	299, 629, 825, 856, 965, 1132, 1886, 2050, 2345
Lsp1109I	GCAGC	6 cut(s)	503, 644, 995, 1249, 1352, 2201
LweI	GCATC	2 cut(s)	453, 1832
MabI	ACCWGGT	1 cut(s)	716
MaeII	ACGT	2 cut(s)	766, 1080
MaeIII	GTNAC	7 cut(s)	101, 135, 1114, 1646, 1981, 2017, 2151
MalI	GATC	8 cut(s)	155, 164, 389, 1066, 1195, 1234, 1590, 2136
MboI	GATC	8 cut(s)	153, 162, 387, 1064, 1193, 1232, 1588, 2134
MfeI	CAATTG	2 cut(s)	1989, 2184
MflI	RGATCY	3 cut(s)	387, 1193, 1232
MhlI	GDGCHC	6 cut(s)	271, 304, 712, 822, 1466, 2106
MlyI	GAGTC	4 cut(s)	1037, 1838, 2197, 2449
MmeI	TCCRAC	3 cut(s)	1566, 1657, 2552
MroI	TCCGGA	1 cut(s)	853
MroXI	GAANNNNTTC	2 cut(s)	741, 2226
MseI	TTAA	8 cut(s)	20, 533, 551, 1743, 1854, 1959, 2055, 2250
MslI	CAYNNNNRTG	2 cut(s)	647, 2112
MspCI	CTTAAG	2 cut(s)	1958, 2054
MspI	CCGG	4 cut(s)	237, 285, 854, 1256
MspR9I	CCNGG	2 cut(s)	286, 718
MunI	CAATTG	2 cut(s)	1989, 2184
MvaI	CCWGG	1 cut(s)	718
MvnI	CGCG	1 cut(s)	1821
NciI	CCSGG	1 cut(s)	286
NdeI	CATATG	1 cut(s)	295
NdeII	GATC	8 cut(s)	153, 162, 387, 1064, 1193, 1232, 1588, 2134
NheI	GCTAGC	1 cut(s)	2179
NlaIV	GGNNCC	2 cut(s)	931, 2373
NmeAIII	GCCGAG	1 cut(s)	1543
NmuCI	GTSAC	5 cut(s)	135, 1114, 1981, 2017, 2151
NspI	RCATGY	2 cut(s)	1169, 2478
NspV	TTCGAA	1 cut(s)	2230
PaeI	GCATGC	1 cut(s)	2478
PagI	TCATGA	1 cut(s)	165
PceI	AGGCCT	1 cut(s)	1302
PciSI	GCTCTTC	2 cut(s)	501, 2331
PdmI	GAANNNNTTC	2 cut(s)	741, 2226
PfeI	GAWTC	7 cut(s)	130, 973, 1252, 1868, 1915, 2285, 2510
PkrI	GCNGC	7 cut(s)	493, 634, 934, 985, 1264, 1342, 2191
PleI	GAGTC	4 cut(s)	1036, 1838, 2197, 2448
PpsI	GAGTC	4 cut(s)	1036, 1838, 2197, 2448
PshAI	GACNNNNGTC	1 cut(s)	2274
PsiI	TTATAA	1 cut(s)	1040
Psp124BI	GAGCTC	3 cut(s)	304, 822, 1466
Psp6I	CCWGG	1 cut(s)	716
PspEI	GGTNACC	1 cut(s)	1646
PspFI	CCCAGC	3 cut(s)	591, 968, 1623
PspGI	CCWGG	1 cut(s)	716
PspN4I	GGNNCC	2 cut(s)	931, 2373
PspPI	GGNCC	3 cut(s)	113, 418, 1796
PstI	CTGCAG	1 cut(s)	153
PstNI	CAGNNNCTG	2 cut(s)	705, 2066
PsuI	RGATCY	3 cut(s)	387, 1193, 1232
RsaI	GTAC	8 cut(s)	143, 582, 681, 695, 943, 1369, 1566, 2034
RsaNI	GTAC	8 cut(s)	142, 581, 680, 694, 942, 1368, 1565, 2033
RseI	CAYNNNNRTG	2 cut(s)	647, 2112
SacI	GAGCTC	3 cut(s)	304, 822, 1466
SapI	GCTCTTC	2 cut(s)	501, 2331
SaqAI	TTAA	8 cut(s)	20, 533, 551, 1743, 1854, 1959, 2055, 2250
SatI	GCNGC	7 cut(s)	492, 633, 933, 984, 1263, 1341, 2190
Sau3AI	GATC	8 cut(s)	153, 162, 387, 1064, 1193, 1232, 1588, 2134
Sau96I	GGNCC	3 cut(s)	113, 418, 1796
ScaI	AGTACT	3 cut(s)	143, 695, 943
SchI	GAGTC	4 cut(s)	1037, 1838, 2197, 2449
ScrFI	CCNGG	2 cut(s)	286, 718
SduI	GDGCHC	6 cut(s)	271, 304, 712, 822, 1466, 2106
SexAI	ACCWGGT	1 cut(s)	716
SfaNI	GCATC	2 cut(s)	453, 1832
SfcI	CTRYAG	1 cut(s)	149
SfuI	TTCGAA	1 cut(s)	2230
SmiMI	CAYNNNNRTG	2 cut(s)	647, 2112
SmlI	CTYRAG	3 cut(s)	1610, 1958, 2054
SmoI	CTYRAG	3 cut(s)	1610, 1958, 2054
SpeI	ACTAGT	1 cut(s)	1318
SphI	GCATGC	1 cut(s)	2478
SseBI	AGGCCT	1 cut(s)	1302
SsiI	CCGC	6 cut(s)	446, 933, 1169, 1500, 1819, 2363
SstI	GAGCTC	3 cut(s)	304, 822, 1466
StuI	AGGCCT	1 cut(s)	1302
StyD4I	CCNGG	2 cut(s)	284, 716
StyI	CCWWGG	1 cut(s)	625
TaaI	ACNGT	7 cut(s)	141, 906, 1051, 1564, 1911, 1923, 2273
TaiI	ACGT	2 cut(s)	769, 1083
TaqI	TCGA	9 cut(s)	161, 313, 988, 1063, 1284, 1913, 2123, 2230, 2405
TatI	WGTACW	5 cut(s)	141, 580, 693, 941, 2032
TauI	GCSGC	1 cut(s)	935
TfiI	GAWTC	7 cut(s)	130, 973, 1252, 1868, 1915, 2285, 2510
Tru1I	TTAA	8 cut(s)	20, 533, 551, 1743, 1854, 1959, 2055, 2250
Tru9I	TTAA	8 cut(s)	20, 533, 551, 1743, 1854, 1959, 2055, 2250
TscAI	CASTG	4 cut(s)	211, 343, 909, 1896
TseFI	GTSAC	5 cut(s)	135, 1114, 1981, 2017, 2151
TseI	GCWGC	6 cut(s)	491, 632, 983, 1262, 1340, 2189
Tsp45I	GTSAC	5 cut(s)	135, 1114, 1981, 2017, 2151
TspGWI	ACGGA	2 cut(s)	44, 2452
TspRI	CASTG	4 cut(s)	211, 343, 909, 1896
Vha464I	CTTAAG	2 cut(s)	1958, 2054
VneI	GTGCAC	2 cut(s)	267, 708
XapI	RAATTY	2 cut(s)	726, 2452
XceI	RCATGY	2 cut(s)	1169, 2478
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1129
XmiI	GTMKAC	1 cut(s)	908
XmnI	GAANNNNTTC	2 cut(s)	741, 2226
ZrmI	AGTACT	3 cut(s)	143, 695, 943

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.