RLG00000007534

phosphatase 2c

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Forward (+)
17938829 .. 17941134
2306 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000007534

Sequence Viewer

Length: 1227 bp
ATGAAGTGTACATCACATGGTGGCCAAGGCAAAGGCGTGAAAGATCAGCAGCGAGCTCATGACATCATCTTCCGGCAGCTCATAGGAGGAGTTATGGTGCTGTTTCCATCTTTCCTTGATGGGTTGGGAAGAACCATCTCGATCAAGAAGACCAAGAATTGCCATGGTGACGTGGCAAAGGAGACTGCAGAAGCATTGGCGAAGGAAGCAAAAAAGAATGAGCTGGTTTTGAGTTCTTCTGGGATTGTTGACTCTGACAAGTCTAACAATTTTTCTTCTGTTTGCTCCAAGAGAGGCCAAAAGGGTATCAATCAGGATTGCTTAGTCATTTGGGAGGAATTTGGGTGCCAAGAAGACATGATCTTTTGTGGAGTGTTTGATGGGCATGGACAGTGGGGACATCTTGTTAGCAAAAGGGTCAGGCAATCTCTGCCTTCTTCTTTGTTGTGCAATTGGCAAGAAACTCTCAGTTTATCATCACTTGACCTGAATTTTAAAATGGAGATGGATCGAAATCTCCATCGATACGATACATGGAAGCAGTCCTTTCTTAAAACATATGCTGCCATTGACCAGGAGCTTAAGCATTCTTCTAAAATCGATTCCTATCGAAGTGGTACTACAGCGTTGACAATTATTAAGCAGGGTGAACTTCTCATCATAGCACATGTTGGCGATTCTCGGGCTGTTTTGGCCTCCACTTCAGAAGATGGGAGCTTGGTACCTATCCAGCTTACAGTCGACTTCAAGCCTAACTTACCTCAGGAGGCTGAGAGAATCAGAAGGTCCAATGGACGAGTGTTTTGTCTACATGATGAACCGGGGACTTATAGGGTGTGGATGCCAAATGGCAAGACACCAGGACTGGCAGTATCAAGAGCTTTTGGTGACTATTGTGTTAAGGACTTTGGGCTTATTTCTGTGCCTGATGTGACCCAAAGATACATAACCAGCAAAGACCAGTTTGTCATTCTAGCAACAGATGGGGTATGGGATGTTATCTCCAACAAAGAAGCTATACAGATAGTTTCTTCGGCACCAGATAGGAACAAAGCAGCAAAAAGACTGGTGGCATGTGCTGCTCTTGCATGGAAGTCTAAGAGAAGAGGCATTGCAATGGATGACATCTCCGCTATTTGCCTGTTCTTTCACCCTAATTCATCATCGCAACAAACCAACCCTTTGGTCTCTGAATATACTGGTGTGAAGACGTCTGGGTGTATGTAG

Protein Analysis

409

Amino Acids

45.12

Weight (kDa)

8.73

Isoelectric Point (pI)

37.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PP2C PF00481 104 - 359 7.3e-42 Protein phosphatase 2C
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 965
AatII GACGTC 1 cut(s) 1214
Acc65I GGTACC 1 cut(s) 721
AccB1I GGYRCC 3 cut(s) 345, 721, 1036
AccI GTMKAC 2 cut(s) 741, 808
AciI CCGC 1 cut(s) 1131
AclWI GGATC 1 cut(s) 516
AcoI YGGCCR 1 cut(s) 22
AcsI RAATTY 2 cut(s) 338, 490
AcuI CTGAAG 1 cut(s) 687
AcyI GRCGYC 1 cut(s) 1211
AdeI CACNNNGTG 1 cut(s) 20
AfaI GTAC 3 cut(s) 10, 619, 723
AflII CTTAAG 1 cut(s) 581
AflIII ACRYGT 1 cut(s) 667
AgsI TTSAA 1 cut(s) 748
AjiI CACGTC 1 cut(s) 172
AjnI CCWGG 2 cut(s) 573, 859
AluBI AGCT 8 cut(s) 56, 79, 223, 580, 717, 733, 881, 1016
AluI AGCT 8 cut(s) 56, 79, 223, 580, 717, 733, 881, 1016
Alw21I GWGCWC 1 cut(s) 58
Alw26I GTCTC 2 cut(s) 176, 1192
AlwI GGATC 1 cut(s) 516
Ama87I CYCGRG 1 cut(s) 681
AoxI GGCC 3 cut(s) 22, 295, 693
ApeKI GCWGC 5 cut(s) 49, 76, 563, 1055, 1079
ApoI RAATTY 2 cut(s) 338, 490
ArsI GACNNNNNNTTYG 2 cut(s) 786, 818
Asp718I GGTACC 1 cut(s) 721
AspS9I GGNCC 1 cut(s) 786
AsuC2I CCSGG 1 cut(s) 822
AsuHPI GGTGA 4 cut(s) 179, 659, 899, 1142
AvaI CYCGRG 1 cut(s) 681
AvaII GGWCC 1 cut(s) 786
AxyI CCTNAGG 1 cut(s) 762
BalI TGGCCA 1 cut(s) 24
BanI GGYRCC 3 cut(s) 345, 721, 1036
BanII GRGCYC 1 cut(s) 58
BarI GAAGNNNNNNTAC 2 cut(s) 604, 636
BbsI GAAGAC 3 cut(s) 155, 360, 1214
Bbv12I GWGCWC 1 cut(s) 58
BbvI GCAGC 5 cut(s) 61, 88, 550, 1066, 1067
BccI CCATC 8 cut(s) 113, 115, 143, 374, 499, 528, 704, 977
BciT130I CCWGG 2 cut(s) 575, 861
BcnI CCSGG 1 cut(s) 822
BcoDI GTCTC 2 cut(s) 176, 1192
BfaI CTAG 1 cut(s) 974
BfmI CTRYAG 2 cut(s) 186, 621
BfrI CTTAAG 1 cut(s) 581
BisI GCNGC 5 cut(s) 50, 77, 564, 1056, 1080
BlsI GCNGC 5 cut(s) 51, 78, 565, 1057, 1081
Bme1390I CCNGG 3 cut(s) 575, 822, 861
Bme18I GGWCC 1 cut(s) 786
BmeT110I CYCGRG 1 cut(s) 681
BmgBI CACGTC 1 cut(s) 172
BmgT120I GGNCC 1 cut(s) 786
BmiI GGNNCC 3 cut(s) 347, 723, 1038
BmrFI CCNGG 3 cut(s) 575, 822, 861
BmsI GCATC 1 cut(s) 831
BpiI GAAGAC 3 cut(s) 155, 360, 1214
BpuMI CCSGG 1 cut(s) 822
Bsa29I ATCGAT 2 cut(s) 523, 600
BsaBI GATNNNNATC 2 cut(s) 513, 606
BsaHI GRCGYC 1 cut(s) 1211
BsaI GGTCTC 1 cut(s) 1192
BsaJI CCNNGG 3 cut(s) 25, 163, 821
BsaXI ACNNNNNCTCC 2 cut(s) 81, 111
Bse1I ACTGG 4 cut(s) 870, 961, 1071, 1204
Bse21I CCTNAGG 1 cut(s) 762
Bse3DI GCAATG 2 cut(s) 1110, 1122
Bse8I GATNNNNATC 2 cut(s) 513, 606
BseBI CCWGG 2 cut(s) 575, 861
BseCI ATCGAT 2 cut(s) 523, 600
BseDI CCNNGG 3 cut(s) 25, 163, 821
BseGI GGATG 3 cut(s) 846, 1000, 1126
BseJI GATNNNNATC 2 cut(s) 513, 606
BseMI GCAATG 2 cut(s) 1110, 1122
BseMII CTCAG 3 cut(s) 481, 762, 776
BseNI ACTGG 4 cut(s) 870, 961, 1071, 1204
BseRI GAGGAG 1 cut(s) 102
BseXI GCAGC 5 cut(s) 61, 88, 550, 1066, 1067
BshFI GGCC 3 cut(s) 24, 297, 695
BshNI GGYRCC 3 cut(s) 345, 721, 1036
BshVI ATCGAT 2 cut(s) 523, 600
BsiHKAI GWGCWC 1 cut(s) 58
BsiHKCI CYCGRG 1 cut(s) 681
BsiSI CCGG 2 cut(s) 73, 821
BslFI GGGAC 2 cut(s) 411, 838
BsmAI GTCTC 2 cut(s) 176, 1192
BsmFI GGGAC 2 cut(s) 411, 838
BsmI GAATGC 1 cut(s) 586
BsnI GGCC 3 cut(s) 24, 297, 695
Bso31I GGTCTC 1 cut(s) 1192
BsoBI CYCGRG 1 cut(s) 681
Bsp1286I GDGCHC 1 cut(s) 58
Bsp1407I TGTACA 1 cut(s) 8
Bsp143I GATC 4 cut(s) 43, 141, 360, 508
Bsp19I CCATGG 1 cut(s) 163
BspACI CCGC 1 cut(s) 1131
BspANI GGCC 3 cut(s) 24, 297, 695
BspCNI CTCAG 3 cut(s) 480, 763, 775
BspDI ATCGAT 2 cut(s) 523, 600
BspHI TCATGA 1 cut(s) 58
BspLI GGNNCC 3 cut(s) 347, 723, 1038
BspMAI CTGCAG 1 cut(s) 190
BspPI GGATC 1 cut(s) 516
BspT107I GGYRCC 3 cut(s) 345, 721, 1036
BspTI CTTAAG 1 cut(s) 581
BspTNI GGTCTC 1 cut(s) 1192
BsrDI GCAATG 2 cut(s) 1110, 1122
BsrGI TGTACA 1 cut(s) 8
BsrI ACTGG 4 cut(s) 870, 961, 1071, 1204
BssECI CCNNGG 3 cut(s) 25, 163, 821
BssMI GATC 4 cut(s) 43, 141, 360, 508
BssNI GRCGYC 1 cut(s) 1211
BssT1I CCWWGG 2 cut(s) 25, 163
Bst2UI CCWGG 2 cut(s) 575, 861
Bst4CI ACNGT 2 cut(s) 393, 739
Bst6I CTCTTC 1 cut(s) 1099
BstACI GRCGYC 1 cut(s) 1211
BstAFI CTTAAG 1 cut(s) 581
BstAPI GCANNNNNTGC 2 cut(s) 430, 1079
BstAUI TGTACA 1 cut(s) 8
BstC8I GCNNGC 1 cut(s) 54
BstDEI CTNAG 5 cut(s) 322, 467, 762, 771, 1098
BstDSI CCRYGG 1 cut(s) 163
BstF5I GGATG 3 cut(s) 846, 1000, 1126
BstKTI GATC 4 cut(s) 46, 144, 363, 511
BstMAI GTCTC 2 cut(s) 176, 1192
BstMBI GATC 4 cut(s) 43, 141, 360, 508
BstMWI GCNNNNNNNGC 5 cut(s) 206, 430, 692, 1079, 1085
BstNI CCWGG 2 cut(s) 575, 861
BstNSI RCATGY 2 cut(s) 671, 1077
BstSCI CCNGG 3 cut(s) 573, 820, 859
BstSFI CTRYAG 2 cut(s) 186, 621
BstV1I GCAGC 5 cut(s) 61, 88, 550, 1066, 1067
BstV2I GAAGAC 3 cut(s) 155, 360, 1214
BstXI CCANNNNNNTGG 1 cut(s) 1183
Bsu15I ATCGAT 2 cut(s) 523, 600
Bsu36I CCTNAGG 1 cut(s) 762
BsuRI GGCC 3 cut(s) 24, 297, 695
BsuTUI ATCGAT 2 cut(s) 523, 600
BtgI CCRYGG 1 cut(s) 163
BtgZI GCGATG 1 cut(s) 1149
BtrI CACGTC 1 cut(s) 172
BtsCI GGATG 3 cut(s) 846, 1000, 1126
BtsIMutI CAGTG 1 cut(s) 398
Cac8I GCNNGC 1 cut(s) 54
CciI TCATGA 1 cut(s) 58
Cfr13I GGNCC 1 cut(s) 786
ClaI ATCGAT 2 cut(s) 523, 600
Csp6I GTAC 3 cut(s) 9, 618, 722
CviQI GTAC 3 cut(s) 9, 618, 722
DdeI CTNAG 5 cut(s) 322, 467, 762, 771, 1098
DpnI GATC 4 cut(s) 45, 143, 362, 510
DpnII GATC 4 cut(s) 43, 141, 360, 508
DraI TTTAAA 1 cut(s) 496
DraIII CACNNNGTG 1 cut(s) 20
DrdI GACNNNNNNGTC 1 cut(s) 965
DseDI GACNNNNNNGTC 1 cut(s) 965
EaeI YGGCCR 1 cut(s) 22
Eam1104I CTCTTC 1 cut(s) 1099
EarI CTCTTC 1 cut(s) 1099
Ecl136II GAGCTC 1 cut(s) 56
Eco130I CCWWGG 2 cut(s) 25, 163
Eco24I GRGCYC 1 cut(s) 58
Eco31I GGTCTC 1 cut(s) 1192
Eco47I GGWCC 1 cut(s) 786
Eco53kI GAGCTC 1 cut(s) 56
Eco57I CTGAAG 1 cut(s) 687
Eco81I CCTNAGG 1 cut(s) 762
Eco88I CYCGRG 1 cut(s) 681
EcoICRI GAGCTC 1 cut(s) 56
EcoRII CCWGG 2 cut(s) 573, 859
EcoT14I CCWWGG 2 cut(s) 25, 163
EcoT38I GRGCYC 1 cut(s) 58
ErhI CCWWGG 2 cut(s) 25, 163
FalI AAGNNNNNCTT 4 cut(s) 530, 562, 740, 772
FaqI GGGAC 2 cut(s) 411, 838
FauNDI CATATG 1 cut(s) 559
FblI GTMKAC 2 cut(s) 741, 808
Fnu4HI GCNGC 5 cut(s) 50, 77, 564, 1056, 1080
FokI GGATG 3 cut(s) 853, 1007, 1133
FriOI GRGCYC 1 cut(s) 58
Fsp4HI GCNGC 5 cut(s) 50, 77, 564, 1056, 1080
FspBI CTAG 1 cut(s) 974
GluI GCNGC 5 cut(s) 50, 77, 564, 1056, 1080
HaeIII GGCC 3 cut(s) 24, 297, 695
HapII CCGG 2 cut(s) 73, 821
Hin1I GRCGYC 1 cut(s) 1211
HincII GTYRAC 3 cut(s) 250, 630, 742
HindII GTYRAC 3 cut(s) 250, 630, 742
HinfI GANTC 4 cut(s) 251, 602, 677, 777
HpaII CCGG 2 cut(s) 73, 821
HphI GGTGA 4 cut(s) 179, 659, 899, 1142
Hpy166II GTNNAC 6 cut(s) 9, 250, 630, 650, 742, 809
Hpy188I TCNGA 4 cut(s) 256, 706, 782, 1192
Hpy188III TCNNGA 6 cut(s) 59, 139, 145, 314, 764, 876
Hpy8I GTNNAC 6 cut(s) 9, 250, 630, 650, 742, 809
HpyAV CCTTC 3 cut(s) 196, 444, 777
HpyCH4III ACNGT 2 cut(s) 393, 739
HpyCH4IV ACGT 2 cut(s) 171, 1211
HpyCH4V TGCA 4 cut(s) 188, 450, 1088, 1115
HpyF10VI GCNNNNNNNGC 5 cut(s) 206, 430, 692, 1079, 1085
HpyF3I CTNAG 5 cut(s) 322, 467, 762, 771, 1098
HpySE526I ACGT 2 cut(s) 171, 1211
Hsp92I GRCGYC 1 cut(s) 1211
KpnI GGTACC 1 cut(s) 725
Kzo9I GATC 4 cut(s) 43, 141, 360, 508
LmnI GCTCC 3 cut(s) 290, 577, 714
Lsp1109I GCAGC 5 cut(s) 61, 88, 550, 1066, 1067
LweI GCATC 1 cut(s) 831
MaeI CTAG 1 cut(s) 974
MaeII ACGT 2 cut(s) 171, 1211
MaeIII GTNAC 3 cut(s) 167, 887, 931
MalI GATC 4 cut(s) 45, 143, 362, 510
MboI GATC 4 cut(s) 43, 141, 360, 508
MfeI CAATTG 1 cut(s) 451
MhlI GDGCHC 1 cut(s) 58
MlsI TGGCCA 1 cut(s) 24
MluCI AATT 7 cut(s) 157, 268, 338, 451, 490, 633, 1156
MluNI TGGCCA 1 cut(s) 24
MlyI GAGTC 1 cut(s) 245
MmeI TCCRAC 1 cut(s) 1029
MnlI CCTC 7 cut(s) 80, 287, 328, 706, 760, 771, 1100
Mox20I TGGCCA 1 cut(s) 24
MscI TGGCCA 1 cut(s) 24
MseI TTAA 5 cut(s) 495, 552, 582, 639, 900
MslI CAYNNNNRTG 1 cut(s) 1115
Msp20I TGGCCA 1 cut(s) 24
MspCI CTTAAG 1 cut(s) 581
MspI CCGG 2 cut(s) 73, 821
MspR9I CCNGG 3 cut(s) 575, 822, 861
MunI CAATTG 1 cut(s) 451
Mva1269I GAATGC 1 cut(s) 586
MvaI CCWGG 2 cut(s) 575, 861
MwoI GCNNNNNNNGC 5 cut(s) 206, 430, 692, 1079, 1085
NciI CCSGG 1 cut(s) 822
NcoI CCATGG 1 cut(s) 163
NdeI CATATG 1 cut(s) 559
NdeII GATC 4 cut(s) 43, 141, 360, 508
NlaIV GGNNCC 3 cut(s) 347, 723, 1038
NmuCI GTSAC 3 cut(s) 167, 887, 931
NspI RCATGY 2 cut(s) 671, 1077
PagI TCATGA 1 cut(s) 58
PciI ACATGT 1 cut(s) 667
PctI GAATGC 1 cut(s) 586
PfeI GAWTC 3 cut(s) 602, 677, 777
PkrI GCNGC 5 cut(s) 51, 78, 565, 1057, 1081
PleI GAGTC 1 cut(s) 245
PpsI GAGTC 1 cut(s) 245
PscI ACATGT 1 cut(s) 667
Psp124BI GAGCTC 1 cut(s) 58
Psp6I CCWGG 2 cut(s) 573, 859
PspGI CCWGG 2 cut(s) 573, 859
PspN4I GGNNCC 3 cut(s) 347, 723, 1038
PspPI GGNCC 1 cut(s) 786
PstI CTGCAG 1 cut(s) 190
RsaI GTAC 3 cut(s) 10, 619, 723
RsaNI GTAC 3 cut(s) 9, 618, 722
RseI CAYNNNNRTG 1 cut(s) 1115
SacI GAGCTC 1 cut(s) 58
SalI GTCGAC 1 cut(s) 740
SaqAI TTAA 5 cut(s) 495, 552, 582, 639, 900
SatI GCNGC 5 cut(s) 50, 77, 564, 1056, 1080
Sau3AI GATC 4 cut(s) 43, 141, 360, 508
Sau96I GGNCC 1 cut(s) 786
SchI GAGTC 1 cut(s) 245
ScrFI CCNGG 3 cut(s) 575, 822, 861
SduI GDGCHC 1 cut(s) 58
SfaNI GCATC 1 cut(s) 831
SfcI CTRYAG 2 cut(s) 186, 621
SinI GGWCC 1 cut(s) 786
SmiMI CAYNNNNRTG 1 cut(s) 1115
SmlI CTYRAG 1 cut(s) 581
SmoI CTYRAG 1 cut(s) 581
Sse9I AATT 7 cut(s) 157, 268, 338, 451, 490, 633, 1156
SsiI CCGC 1 cut(s) 1131
SspMI CTAG 1 cut(s) 974
SstI GAGCTC 1 cut(s) 58
StyD4I CCNGG 3 cut(s) 573, 820, 859
StyI CCWWGG 2 cut(s) 25, 163
TaaI ACNGT 2 cut(s) 393, 739
TaiI ACGT 2 cut(s) 174, 1214
TaqI TCGA 6 cut(s) 140, 511, 523, 600, 610, 741
TasI AATT 7 cut(s) 157, 268, 338, 451, 490, 633, 1156
TatI WGTACW 1 cut(s) 8
TfiI GAWTC 3 cut(s) 602, 677, 777
Tru1I TTAA 5 cut(s) 495, 552, 582, 639, 900
Tru9I TTAA 5 cut(s) 495, 552, 582, 639, 900
TscAI CASTG 1 cut(s) 398
TseFI GTSAC 3 cut(s) 167, 887, 931
TseI GCWGC 5 cut(s) 49, 76, 563, 1055, 1079
Tsp45I GTSAC 3 cut(s) 167, 887, 931
TspDTI ATGAA 3 cut(s) 17, 831, 1149
TspRI CASTG 1 cut(s) 398
Vha464I CTTAAG 1 cut(s) 581
VpaK11BI GGWCC 1 cut(s) 786
XapI RAATTY 2 cut(s) 338, 490
XceI RCATGY 2 cut(s) 671, 1077
XmiI GTMKAC 2 cut(s) 741, 808
XspI CTAG 1 cut(s) 974
ZraI GACGTC 1 cut(s) 1212
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.