Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0001883

Physical Location & Seq

Genomic Coordinates Forward (+)

32940922 .. 32949229

Gene Structure 8308 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0190200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1851 bp

ATGAGGATGGAAGAGGGTGCTGAGAAGCCCATAGAGGTGAGGGCTTTAGAGGCTCTTGGGCAGGGGTTTGATTTGAGCAGTGATTTCAGGTTGAAGTTTGCAAAAGGGTTGGATGGGAGTAAGGGGAGGTTGGTGGTTCTGAATGAGGATAGCAAGAGGGACATTGTCATTCCTAGTGGTAGTGGTGGGGGAGTTGTCATTCATGGAGTTCCTCACGATATTCACTGCGACAAAGGGGATCGAATCCGCTTCAAGTCCGATGTTCTTGAATTCAATCAGATGTCTGAGCTACTTAATCAGAAATCTTCAGTTCAAGGGAAAATTCCTTCAGGATATCTGAATTCCATTTTTGATTTAACTGGAGACTGGCTTCAAGATGCTGCAGAAACAAAATATCTTGCTTTTGATGGTTTCTTCATTTCACTGTACAATTTGCACCTAACAGCATCTCCACTAATTTTGCGAAACAAAGTACAGAAATCTGTTCCATCTCGTTGGGATCCAGCTGCATTGTCTAGGTTCATCCATTCATACGGAACACACATAATAGTTGGGATGGCAGTTGGAGGTCAAGATTTAGTTTGTGTTAGGCAGAAATCCTCCTCACCAGTTCCTCCCGCTGATCTCAGAAGACACTTGGAGGATCTTGGAGATTTTCTATTTTCAGATGGACCTTCTTTACTACGGGGAAAAACAAGAAATGGAAAACAGAAAATTCCAGAGGTGTTCGATCGTATTTTGCAGTCCAACTCCATGCATTTATCCACTATTTCCGAAACGTCAAGCAAGGATGGCCTTACAGTCGTTTGCTCAAAAAGAGGAGGTGATGTGTTTCTGAATAGTCACTCCAATTGGCTCCAGACAGTCCTTGCTGAACCAGAAGCAATTCTCTTTAAGTTTGTACCCATTACTTCTCTTCTTACTGGTCTTCCAGGCAGTGGCTATCTCAGTCATGCAATCAACTTGTATCTACGTTATAAGCCTGATGCAGAGGATTTACAACATTTCTTGGAGTTCCAAGTTCCGAGGCAATGGGCGCCAATGTTTTGTGAGCTTCCTCTTTCTCATCAACGGAAAAGGGCTTCTTGTCCTTCCCTGCAATTCAGTTTCATGGGCCCTAAGATCTTTGTTAGTTCTAAGCAGGTTTCAACCAGTCAAAAACCAGTTGTTGGCCTACGCCTGTATTTAGAAGGAAAAAAGTGCAATCGGTTGGCCGTTCACGTGCAGCATCTCTCAAGCCTTCCAAATACTATGGATCTTTCTTTGGCAAACACAAGCACAACAAGACCAAGCTGGTGGCGAGGTTCTGATGATTGTGAGCTGAGTGGTGAATTCTTAGAGCCGATTAAATGGAAAAGATACTCGAGCATCTGTTCATCTGTAGTTGGACATGACCCCAACTGGTTGAAGGGAGGTCCAAGTGGTGTGTATATTGTAACCGGTGCACAACTACTAAGCAAAGGAAAATGGCCAAAGACGGTACTTCACCTTCGTCTGCATTACACCTTTCTACCCAATTGTGCAATCCGGAAGACTGAATGGGCTGGGTCGCCAGAGCCTTCTCACAAATCAACGTTCCTTACAAATCTCAGCACCACGTTTACGTTCACTCAAAGGGCAGTTACTGATCAGCAAAAGCAGGATCCAGCTGCACTTAATTCAGGTGTATATCCAGAAGGCCCTCCAGTGCTAAATCACTCTTCTAAGCTGCTAAAATTTGTGGACACGGCTGAGGTGGTGCGAGGGCCACATGATGCTCCAGGGCATTGGTTAGTAACAGCTGCTAAGCTAGTAAAAGAGGGACGTAGAATTGGTCTGCATGTAAAGTTTGCCTTGTTAGACTATTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006996 GO:0007010 GO:0007017 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009628 GO:0009819 GO:0009987 GO:0010035 GO:0016020 GO:0016043 GO:0016311 GO:0019538 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045926 GO:0048519 GO:0050789 GO:0050896 GO:0065007 GO:0071704 GO:0071840 GO:0071944 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04011 map04011

Pfam Domains

Protein Families

PP2C

Protein Analysis

616

Amino Acids

68.46

Weight (kDa)

9.16

Isoelectric Point (pI)

41.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MACPF	PF01823	123 - 323	2.1e-21	MAC/Perforin domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001883)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05640 AT3G05640 AT3G05640 AT5G27930 AT5G27930 AT5G27930
fragaria_vesca	FvH4_4g18870 FvH4_4g18870 FvH4_6g06970 FvH4_6g06970 FvH4_6g06970 FvH4_6g06970 FvH4_6g06970
malus_domestica	MD04G1197100.v1.1 MD12G1210000.v1.1 MD13G1162500.v1.1
prunus_persica	Prupe.1G129800_v2.0.a1 Prupe.1G129800_v2.0.a1 Prupe.6G317600_v2.0.a1
pyrus_communis	pycom04g17430 pycom12g19740 pycom13g13880
rosa_chinensis	RchiOBHm_Chr3g0456511 RchiOBHm_Chr4g0423771
rosa_laevigata	RLG00000007534 RLG00000025299
rosa_multiflora	Rmu_sc0002607.1_g000008
rosa_roxburghii	Rroxscaffold_6G00422680
rosa_rugosa	Rorug03G0013400 Rorug03G0013400 Rorug03G0013400 Rorug04G0189900 Rorug04G0190000 Rorug04G0190100 Rorug04G0190200 Rorug04G0190300
rosa_samantha	Rh3AG074000 Rh3BG075900 Rh3CG075400 Rh3DG077700 Rh4AG249900 Rh4BG255100 Rh4CG263100 Rh4DG249400
rosa_wichuraiana	Rw3G006350 Rw4G021390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	978
Acc36I	ACCTGC	1 cut(s)	1132
AccB1I	GGYRCC	1 cut(s)	1036
AccB7I	CCANNNNNTGG	2 cut(s)	938, 1169
AccIII	TCCGGA	1 cut(s)	1527
AciI	CCGC	2 cut(s)	247, 618
AclI	AACGTT	1 cut(s)	1574
AclWI	GGATC	7 cut(s)	246, 494, 507, 651, 1263, 1637, 1650
AcoI	YGGCCR	2 cut(s)	1212, 1469
AcsI	RAATTY	6 cut(s)	269, 321, 340, 714, 1331, 1715
AcuI	CTGAAG	2 cut(s)	291, 312
AcvI	CACGTG	1 cut(s)	1222
AcyI	GRCGYC	1 cut(s)	1037
AfaI	GTAC	4 cut(s)	428, 474, 903, 1482
AfiI	CCNNNNNNNGG	2 cut(s)	938, 1169
AgeI	ACCGGT	1 cut(s)	1439
AgsI	TTSAA	8 cut(s)	94, 253, 269, 274, 314, 374, 1149, 1408
AjnI	CCWGG	2 cut(s)	931, 1759
AluBI	AGCT	9 cut(s)	289, 506, 1054, 1293, 1321, 1649, 1708, 1781, 1789
AluI	AGCT	9 cut(s)	289, 506, 1054, 1293, 1321, 1649, 1708, 1781, 1789
Alw21I	GWGCWC	1 cut(s)	1447
Alw26I	GTCTC	1 cut(s)	357
Alw44I	GTGCAC	1 cut(s)	1443
AlwI	GGATC	7 cut(s)	246, 494, 507, 651, 1263, 1637, 1650
AlwNI	CAGNNNCTG	1 cut(s)	1625
Ama87I	CYCGRG	1 cut(s)	1363
Aor13HI	TCCGGA	1 cut(s)	1527
AoxI	GGCC	7 cut(s)	793, 1114, 1171, 1212, 1469, 1678, 1745
ApaI	GGGCCC	1 cut(s)	1118
ApaLI	GTGCAC	1 cut(s)	1443
ApeKI	GCWGC	6 cut(s)	380, 506, 1225, 1649, 1708, 1781
ApoI	RAATTY	6 cut(s)	269, 321, 340, 714, 1331, 1715
AsiGI	ACCGGT	1 cut(s)	1439
Asp700I	GAANNNNTTC	1 cut(s)	885
AspLEI	GCGC	1 cut(s)	1039
AspS9I	GGNCC	6 cut(s)	671, 1114, 1115, 1415, 1679, 1745
AsuHPI	GGTGA	5 cut(s)	49, 597, 836, 1340, 1478
AvaI	CYCGRG	1 cut(s)	1363
AvaII	GGWCC	2 cut(s)	671, 1415
BaeGI	GKGCMC	2 cut(s)	1118, 1447
BalI	TGGCCA	1 cut(s)	1471
BamHI	GGATCC	2 cut(s)	499, 1642
BanI	GGYRCC	1 cut(s)	1036
BanII	GRGCYC	1 cut(s)	1118
BarI	GAAGNNNNNNTAC	2 cut(s)	1473, 1505
BbrPI	CACGTG	1 cut(s)	1222
BbsI	GAAGAC	3 cut(s)	637, 920, 1538
Bbv12I	GWGCWC	1 cut(s)	1447
BbvCI	CCTCAGC	1 cut(s)	1731
BbvI	GCAGC	6 cut(s)	367, 493, 1237, 1636, 1695, 1768
BccI	CCATC	6 cut(s)	107, 401, 496, 550, 662, 785
BceAI	ACGGC	2 cut(s)	1199, 1743
BciT130I	CCWGG	2 cut(s)	933, 1761
BclI	TGATCA	1 cut(s)	1627
BcoDI	GTCTC	1 cut(s)	357
BfaI	CTAG	3 cut(s)	174, 516, 1790
BfmI	CTRYAG	2 cut(s)	381, 1380
BfoI	RGCGCY	1 cut(s)	1040
BfuAI	ACCTGC	1 cut(s)	1132
BglII	AGATCT	1 cut(s)	1122
BisI	GCNGC	6 cut(s)	381, 507, 1226, 1650, 1709, 1782
BlpI	GCTNAGC	1 cut(s)	1785
BlsI	GCNGC	6 cut(s)	382, 508, 1227, 1651, 1710, 1783
Bme1390I	CCNGG	2 cut(s)	933, 1761
Bme18I	GGWCC	2 cut(s)	671, 1415
BmeT110I	CYCGRG	1 cut(s)	1363
BmgT120I	GGNCC	6 cut(s)	671, 1114, 1115, 1415, 1679, 1745
BmiI	GGNNCC	5 cut(s)	501, 857, 1038, 1116, 1644
BmrFI	CCNGG	2 cut(s)	933, 1761
BmsI	GCATC	6 cut(s)	367, 455, 976, 1237, 1377, 1744
BpiI	GAAGAC	3 cut(s)	637, 920, 1538
BpmI	CTGGAG	4 cut(s)	381, 842, 1668, 1743
Bpu10I	CCTNAGC	1 cut(s)	1731
Bpu1102I	GCTNAGC	1 cut(s)	1785
BpuEI	CTTGAG	1 cut(s)	1219
BsaAI	YACGTR	1 cut(s)	1222
BsaHI	GRCGYC	1 cut(s)	1037
BsaJI	CCNNGG	2 cut(s)	1025, 1760
BsaWI	WCCGGW	2 cut(s)	1439, 1527
BsaXI	ACNNNNNCTCC	4 cut(s)	433, 463, 813, 843
Bsc4I	CCNNNNNNNGG	2 cut(s)	938, 1169
Bse118I	RCCGGY	1 cut(s)	1439
Bse1I	ACTGG	8 cut(s)	364, 371, 608, 928, 1152, 1163, 1406, 1685
Bse3DI	GCAATG	1 cut(s)	1037
BseAI	TCCGGA	1 cut(s)	1527
BseBI	CCWGG	2 cut(s)	933, 1761
BseDI	CCNNGG	2 cut(s)	1025, 1760
BseGI	GGATG	5 cut(s)	12, 118, 522, 561, 796
BseLI	CCNNNNNNNGG	2 cut(s)	938, 1169
BseMI	GCAATG	1 cut(s)	1037
BseMII	CTCAG	7 cut(s)	12, 276, 640, 961, 1313, 1603, 1722
BseNI	ACTGG	8 cut(s)	364, 371, 608, 928, 1152, 1163, 1406, 1685
BseRI	GAGGAG	2 cut(s)	592, 834
BseSI	GKGCMC	2 cut(s)	1118, 1447
BseXI	GCAGC	6 cut(s)	367, 493, 1237, 1636, 1695, 1768
BseYI	CCCAGC	1 cut(s)	1544
BsgI	GTGCAG	2 cut(s)	1244, 1635
Bsh1285I	CGRYCG	1 cut(s)	733
BshFI	GGCC	7 cut(s)	795, 1116, 1173, 1214, 1471, 1680, 1747
BshNI	GGYRCC	1 cut(s)	1036
BshTI	ACCGGT	1 cut(s)	1439
BsiEI	CGRYCG	1 cut(s)	733
BsiHKAI	GWGCWC	1 cut(s)	1447
BsiHKCI	CYCGRG	1 cut(s)	1363
BsiSI	CCGG	2 cut(s)	1440, 1528
BslFI	GGGAC	2 cut(s)	173, 1815
BslI	CCNNNNNNNGG	2 cut(s)	938, 1169
BsmAI	GTCTC	1 cut(s)	357
BsmFI	GGGAC	2 cut(s)	173, 1815
BsnI	GGCC	7 cut(s)	795, 1116, 1173, 1214, 1471, 1680, 1747
BsoBI	CYCGRG	1 cut(s)	1363
Bsp120I	GGGCCC	1 cut(s)	1114
Bsp1286I	GDGCHC	2 cut(s)	1118, 1447
Bsp13I	TCCGGA	1 cut(s)	1527
Bsp1407I	TGTACA	1 cut(s)	426
Bsp143I	GATC	9 cut(s)	238, 499, 622, 643, 730, 1122, 1255, 1627, 1642
Bsp1720I	GCTNAGC	1 cut(s)	1785
BspACI	CCGC	2 cut(s)	247, 618
BspANI	GGCC	7 cut(s)	795, 1116, 1173, 1214, 1471, 1680, 1747
BspCNI	CTCAG	7 cut(s)	13, 277, 639, 960, 1314, 1602, 1723
BspEI	TCCGGA	1 cut(s)	1527
BspLI	GGNNCC	5 cut(s)	501, 857, 1038, 1116, 1644
BspMAI	CTGCAG	1 cut(s)	385
BspMI	ACCTGC	1 cut(s)	1132
BspPI	GGATC	7 cut(s)	246, 494, 507, 651, 1263, 1637, 1650
BspT107I	GGYRCC	1 cut(s)	1036
BsrDI	GCAATG	1 cut(s)	1037
BsrFI	RCCGGY	1 cut(s)	1439
BsrGI	TGTACA	1 cut(s)	426
BsrI	ACTGG	8 cut(s)	364, 371, 608, 928, 1152, 1163, 1406, 1685
BssAI	RCCGGY	1 cut(s)	1439
BssECI	CCNNGG	2 cut(s)	1025, 1760
BssMI	GATC	9 cut(s)	238, 499, 622, 643, 730, 1122, 1255, 1627, 1642
BssNI	GRCGYC	1 cut(s)	1037
Bst2UI	CCWGG	2 cut(s)	933, 1761
Bst4CI	ACNGT	4 cut(s)	426, 802, 865, 1480
Bst6I	CTCTTC	3 cut(s)	6, 921, 1705
BstACI	GRCGYC	1 cut(s)	1037
BstAUI	TGTACA	1 cut(s)	426
BstBAI	YACGTR	1 cut(s)	1222
BstF5I	GGATG	5 cut(s)	12, 118, 522, 561, 796
BstH2I	RGCGCY	1 cut(s)	1040
BstHHI	GCGC	1 cut(s)	1039
BstKTI	GATC	9 cut(s)	241, 502, 625, 646, 733, 1125, 1258, 1630, 1645
BstMAI	GTCTC	1 cut(s)	357
BstMBI	GATC	9 cut(s)	238, 499, 622, 643, 730, 1122, 1255, 1627, 1642
BstMCI	CGRYCG	1 cut(s)	733
BstMWI	GCNNNNNNNGC	3 cut(s)	50, 792, 1036
BstNI	CCWGG	2 cut(s)	933, 1761
BstNSI	RCATGY	1 cut(s)	1823
BstSCI	CCNGG	2 cut(s)	931, 1759
BstSFI	CTRYAG	2 cut(s)	381, 1380
BstSLI	GKGCMC	2 cut(s)	1118, 1447
BstV1I	GCAGC	6 cut(s)	367, 493, 1237, 1636, 1695, 1768
BstV2I	GAAGAC	3 cut(s)	637, 920, 1538
BstX2I	RGATCY	5 cut(s)	499, 643, 1122, 1255, 1642
BstXI	CCANNNNNNTGG	3 cut(s)	495, 1296, 1767
BstYI	RGATCY	5 cut(s)	499, 643, 1122, 1255, 1642
BsuRI	GGCC	7 cut(s)	795, 1116, 1173, 1214, 1471, 1680, 1747
BtsCI	GGATG	5 cut(s)	12, 118, 522, 561, 796
BtsI	GCAGTG	3 cut(s)	85, 223, 943
BtsIMutI	CAGTG	5 cut(s)	85, 223, 422, 943, 1692
BveI	ACCTGC	1 cut(s)	1132
CaiI	CAGNNNCTG	1 cut(s)	1625
CfoI	GCGC	1 cut(s)	1039
Cfr10I	RCCGGY	1 cut(s)	1439
Cfr13I	GGNCC	6 cut(s)	671, 1114, 1115, 1415, 1679, 1745
Csp6I	GTAC	4 cut(s)	427, 473, 902, 1481
CspAI	ACCGGT	1 cut(s)	1439
CspCI	CAANNNNNGTGG	2 cut(s)	441, 476
CviAII	CATG	7 cut(s)	203, 754, 953, 1111, 1391, 1751, 1820
CviQI	GTAC	4 cut(s)	427, 473, 902, 1481
DinI	GGCGCC	1 cut(s)	1038
DpnI	GATC	9 cut(s)	240, 501, 624, 645, 732, 1124, 1257, 1629, 1644
DpnII	GATC	9 cut(s)	238, 499, 622, 643, 730, 1122, 1255, 1627, 1642
EaeI	YGGCCR	2 cut(s)	1212, 1469
Eam1104I	CTCTTC	3 cut(s)	6, 921, 1705
EarI	CTCTTC	3 cut(s)	6, 921, 1705
Eco24I	GRGCYC	1 cut(s)	1118
Eco32I	GATATC	1 cut(s)	335
Eco47I	GGWCC	2 cut(s)	671, 1415
Eco57I	CTGAAG	2 cut(s)	291, 312
Eco72I	CACGTG	1 cut(s)	1222
Eco88I	CYCGRG	1 cut(s)	1363
EcoO109I	RGGNCCY	2 cut(s)	1115, 1679
EcoRI	GAATTC	3 cut(s)	269, 340, 1331
EcoRII	CCWGG	2 cut(s)	931, 1759
EcoRV	GATATC	1 cut(s)	335
EcoT22I	ATGCAT	1 cut(s)	759
EcoT38I	GRGCYC	1 cut(s)	1118
EgeI	GGCGCC	1 cut(s)	1038
EheI	GGCGCC	1 cut(s)	1038
FaeI	CATG	7 cut(s)	206, 757, 956, 1114, 1394, 1754, 1823
FalI	AAGNNNNNCTT	4 cut(s)	1069, 1101, 1817, 1849
FaqI	GGGAC	2 cut(s)	173, 1815
FatI	CATG	7 cut(s)	202, 753, 952, 1110, 1390, 1750, 1819
FauI	CCCGC	1 cut(s)	625
FbaI	TGATCA	1 cut(s)	1627
Fnu4HI	GCNGC	6 cut(s)	381, 507, 1226, 1650, 1709, 1782
FokI	GGATG	5 cut(s)	19, 125, 509, 568, 803
FriOI	GRGCYC	1 cut(s)	1118
Fsp4HI	GCNGC	6 cut(s)	381, 507, 1226, 1650, 1709, 1782
FspBI	CTAG	3 cut(s)	174, 516, 1790
GlaI	GCGC	1 cut(s)	1038
GluI	GCNGC	6 cut(s)	381, 507, 1226, 1650, 1709, 1782
GsaI	CCCAGC	1 cut(s)	1548
GsuI	CTGGAG	4 cut(s)	381, 842, 1668, 1743
HaeII	RGCGCY	1 cut(s)	1040
HaeIII	GGCC	7 cut(s)	795, 1116, 1173, 1214, 1471, 1680, 1747
HapII	CCGG	2 cut(s)	1440, 1528
HhaI	GCGC	1 cut(s)	1039
Hin1I	GRCGYC	1 cut(s)	1037
Hin1II	CATG	7 cut(s)	206, 757, 956, 1114, 1394, 1754, 1823
Hin6I	GCGC	1 cut(s)	1037
HinP1I	GCGC	1 cut(s)	1037
HinfI	GANTC	1 cut(s)	243
HpaII	CCGG	2 cut(s)	1440, 1528
HphI	GGTGA	5 cut(s)	49, 597, 836, 1340, 1478
Hpy166II	GTNNAC	5 cut(s)	1219, 1445, 1602, 1608, 1723
Hpy188III	TCNNGA	9 cut(s)	215, 266, 330, 374, 572, 719, 859, 1528, 1673
Hpy8I	GTNNAC	5 cut(s)	1219, 1445, 1602, 1608, 1723
HpyAV	CCTTC	9 cut(s)	336, 684, 1101, 1184, 1250, 1402, 1499, 1569, 1670
HpyCH4III	ACNGT	4 cut(s)	426, 802, 865, 1480
HpyCH4IV	ACGT	7 cut(s)	779, 973, 1221, 1574, 1598, 1604, 1804
HpyF10VI	GCNNNNNNNGC	3 cut(s)	50, 792, 1036
HpySE526I	ACGT	7 cut(s)	779, 973, 1221, 1574, 1598, 1604, 1804
Hsp92I	GRCGYC	1 cut(s)	1037
Hsp92II	CATG	7 cut(s)	206, 757, 956, 1114, 1394, 1754, 1823
HspAI	GCGC	1 cut(s)	1037
KasI	GGCGCC	1 cut(s)	1036
Kpn2I	TCCGGA	1 cut(s)	1527
Ksp22I	TGATCA	1 cut(s)	1627
Kzo9I	GATC	9 cut(s)	238, 499, 622, 643, 730, 1122, 1255, 1627, 1642
LmnI	GCTCC	2 cut(s)	861, 1762
Lsp1109I	GCAGC	6 cut(s)	367, 493, 1237, 1636, 1695, 1768
LweI	GCATC	6 cut(s)	367, 455, 976, 1237, 1377, 1744
MaeI	CTAG	3 cut(s)	174, 516, 1790
MaeII	ACGT	7 cut(s)	779, 973, 1221, 1574, 1598, 1604, 1804
MaeIII	GTNAC	4 cut(s)	842, 1435, 1621, 1774
MalI	GATC	9 cut(s)	240, 501, 624, 645, 732, 1124, 1257, 1629, 1644
MboI	GATC	9 cut(s)	238, 499, 622, 643, 730, 1122, 1255, 1627, 1642
MboII	GAAGA	8 cut(s)	23, 297, 406, 642, 908, 920, 1543, 1692
MfeI	CAATTG	2 cut(s)	850, 1516
MflI	RGATCY	5 cut(s)	499, 643, 1122, 1255, 1642
MhlI	GDGCHC	2 cut(s)	1118, 1447
MlsI	TGGCCA	1 cut(s)	1471
MluNI	TGGCCA	1 cut(s)	1471
Mly113I	GGCGCC	1 cut(s)	1037
MmeI	TCCRAC	4 cut(s)	90, 544, 771, 1366
Mox20I	TGGCCA	1 cut(s)	1471
Mph1103I	ATGCAT	1 cut(s)	759
MroI	TCCGGA	1 cut(s)	1527
MroXI	GAANNNNTTC	1 cut(s)	885
MscI	TGGCCA	1 cut(s)	1471
MseI	TTAA	5 cut(s)	294, 356, 894, 1347, 1656
MslI	CAYNNNNRTG	1 cut(s)	35
Msp20I	TGGCCA	1 cut(s)	1471
MspA1I	CMGCKG	4 cut(s)	506, 620, 1649, 1781
MspI	CCGG	2 cut(s)	1440, 1528
MspR9I	CCNGG	2 cut(s)	933, 1761
MunI	CAATTG	2 cut(s)	850, 1516
MvaI	CCWGG	2 cut(s)	933, 1761
MwoI	GCNNNNNNNGC	3 cut(s)	50, 792, 1036
NarI	GGCGCC	1 cut(s)	1037
NdeII	GATC	9 cut(s)	238, 499, 622, 643, 730, 1122, 1255, 1627, 1642
NlaIII	CATG	7 cut(s)	206, 757, 956, 1114, 1394, 1754, 1823
NlaIV	GGNNCC	5 cut(s)	501, 857, 1038, 1116, 1644
NmuCI	GTSAC	1 cut(s)	842
NsiI	ATGCAT	1 cut(s)	759
NspI	RCATGY	1 cut(s)	1823
PaeR7I	CTCGAG	1 cut(s)	1363
PdmI	GAANNNNTTC	1 cut(s)	885
PfeI	GAWTC	1 cut(s)	243
PflFI	GACNNNGTC	1 cut(s)	164
PflMI	CCANNNNNTGG	2 cut(s)	938, 1169
PinAI	ACCGGT	1 cut(s)	1439
PkrI	GCNGC	6 cut(s)	382, 508, 1227, 1651, 1710, 1783
Ple19I	CGATCG	1 cut(s)	733
PluTI	GGCGCC	1 cut(s)	1040
PmaCI	CACGTG	1 cut(s)	1222
PmlI	CACGTG	1 cut(s)	1222
Ppu21I	YACGTR	1 cut(s)	1222
PsiI	TTATAA	1 cut(s)	978
Psp1406I	AACGTT	1 cut(s)	1574
Psp6I	CCWGG	2 cut(s)	931, 1759
PspCI	CACGTG	1 cut(s)	1222
PspFI	CCCAGC	1 cut(s)	1544
PspGI	CCWGG	2 cut(s)	931, 1759
PspN4I	GGNNCC	5 cut(s)	501, 857, 1038, 1116, 1644
PspOMI	GGGCCC	1 cut(s)	1114
PspPI	GGNCC	6 cut(s)	671, 1114, 1115, 1415, 1679, 1745
PspXI	VCTCGAGB	1 cut(s)	1363
PstI	CTGCAG	1 cut(s)	385
PstNI	CAGNNNCTG	1 cut(s)	1625
PsuI	RGATCY	5 cut(s)	499, 643, 1122, 1255, 1642
PsyI	GACNNNGTC	1 cut(s)	164
PvuI	CGATCG	1 cut(s)	733
PvuII	CAGCTG	3 cut(s)	506, 1649, 1781
RsaI	GTAC	4 cut(s)	428, 474, 903, 1482
RsaNI	GTAC	4 cut(s)	427, 473, 902, 1481
RseI	CAYNNNNRTG	1 cut(s)	35
SaqAI	TTAA	5 cut(s)	294, 356, 894, 1347, 1656
SatI	GCNGC	6 cut(s)	381, 507, 1226, 1650, 1709, 1782
Sau3AI	GATC	9 cut(s)	238, 499, 622, 643, 730, 1122, 1255, 1627, 1642
Sau96I	GGNCC	6 cut(s)	671, 1114, 1115, 1415, 1679, 1745
ScrFI	CCNGG	2 cut(s)	933, 1761
SduI	GDGCHC	2 cut(s)	1118, 1447
SfaNI	GCATC	6 cut(s)	367, 455, 976, 1237, 1377, 1744
SfcI	CTRYAG	2 cut(s)	381, 1380
SfoI	GGCGCC	1 cut(s)	1038
Sfr274I	CTCGAG	1 cut(s)	1363
SinI	GGWCC	2 cut(s)	671, 1415
SlaI	CTCGAG	1 cut(s)	1363
SmiMI	CAYNNNNRTG	1 cut(s)	35
SmlI	CTYRAG	2 cut(s)	1234, 1363
SmoI	CTYRAG	2 cut(s)	1234, 1363
SsiI	CCGC	2 cut(s)	247, 618
SspDI	GGCGCC	1 cut(s)	1036
SspMI	CTAG	3 cut(s)	174, 516, 1790
StyD4I	CCNGG	2 cut(s)	931, 1759
TaaI	ACNGT	4 cut(s)	426, 802, 865, 1480
TaiI	ACGT	7 cut(s)	782, 976, 1224, 1577, 1601, 1607, 1807
TaqI	TCGA	3 cut(s)	241, 729, 1364
TatI	WGTACW	2 cut(s)	426, 472
TfiI	GAWTC	1 cut(s)	243
Tru1I	TTAA	5 cut(s)	294, 356, 894, 1347, 1656
Tru9I	TTAA	5 cut(s)	294, 356, 894, 1347, 1656
TscAI	CASTG	5 cut(s)	85, 230, 429, 943, 1692
TseFI	GTSAC	1 cut(s)	842
TseI	GCWGC	6 cut(s)	380, 506, 1225, 1649, 1708, 1781
Tsp45I	GTSAC	1 cut(s)	842
TspDTI	ATGAA	6 cut(s)	191, 406, 511, 519, 1099, 1365
TspGWI	ACGGA	2 cut(s)	549, 1087
TspRI	CASTG	5 cut(s)	85, 230, 429, 943, 1692
Tth111I	GACNNNGTC	1 cut(s)	164
Van91I	CCANNNNNTGG	2 cut(s)	938, 1169
VneI	GTGCAC	1 cut(s)	1443
VpaK11BI	GGWCC	2 cut(s)	671, 1415
XapI	RAATTY	6 cut(s)	269, 321, 340, 714, 1331, 1715
XceI	RCATGY	1 cut(s)	1823
XhoI	CTCGAG	1 cut(s)	1363
XmnI	GAANNNNTTC	1 cut(s)	885
XspI	CTAG	3 cut(s)	174, 516, 1790
Zsp2I	ATGCAT	1 cut(s)	759

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.