Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0006654

Physical Location & Seq

Genomic Coordinates Reverse (-)

20466244 .. 20468943

Gene Structure 2700 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000007736

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2109 bp

ATGCTCAAAAACCAACCTTTTGACCCAAACCCCTCAGTTTCAGCCACCACAACTCAACCATGGACCTCCGACTCAGTCTCCCAAGTCCTAACCTCCATCCCCAGATTCTTCTTCCAGTCCCCTCGCTCCATAGGTCGCCAAACCGGCTTCCGGCACCGCGCTCCGTTAAAGCAACGCCATCTCAGGCAAGAAACATATAAATTCCACAACGACATGCTCATTCTTGGCCCAGCTGCCCACAGAGACCTCAACAAGGTTAATCTGGGAGTGGACAAAGCCCTCGATTTTTACTACTGGGTCGAAACCCATTTCGGGTTCAACCACAATGAGCGAACTTGCAGAGACATGGCTATTGTTTTGGCTAAAGGGAATCGGTTGAAGGCCCTATGGGATTTTCTGAAAGACATGTCAAAGAGAGGGAGTAGTGAAAGCCCTCTTGTAACGACACAGTCCATCACCTGTTTGATGAAATGCCTAGGAGAAGAGGGATTGGTTAATGAAGCATTGGCGGCTTTCTATAGAATGAAGCAGTTTCATTGCAAACCGGATGTGTATGCTTACAACACTATTATTTACGCACTTTGCAGGGTTGGGAATTTCAAGAAGGCTCGGTTTTTGCTGGAGCAGATGGAGCTGCCGGGTTTTAGATGCCCGCCGGATACATTCACTTATACGATTTTGATAAGCTCTTATTGTAGATATGGGTTGGAGACTGGGTGCAGGAAGGCCACTAGGAGGAGGTTGTGGGAAGCAAACCACATGTTTCGGAATATGCTCTTTAGAGGTTTTGTTCCTGATGTTGTTACTTACAATGCTTTGATCAATGGTTGTTGCAAGACTTACAGGATAGAGAGGGCATTGGAGTTGTTTGAGGATATGAAGAACAAGGATTGTACCCCCAACCGGGTTACTTATGATTCGTTTATTAGATACTATGCTGCTGTTAATGAGATTGGCAAGGCTGTGGATATGTTAAGAAGGATGCAGAATATGAATCATGGATTGGCCACTTCAAGTTCGTATACTCCAATCATTCATGCCTTGTGTGAAGCAGGAAGGGTTACAGAGGCCTGGAGTTTTCTTGTTGAGTTGGTTGATGGAGGGTCAACACCTAGAGAATATACTTACAAATTAGTTTGCAATGCAATGAGTTCAGCTGGAGAGTTCAATTTTCTTGATGATGGGCTGCGAAAAAGAATAGAAGATGCCACAGCTACCTCAACAGTCAAGTGCGCGGCTGCACTCCTTTGTTTACAAATGGAGGCCAGGGATGACTTTCAAATCATTCTTCTTCGAATTCTTGAATCTGTCGCTGACGAGTCGCTTGTAATTCTCAAAAGCCCTGATATTTTTACCCGTGAGGTTCTCCCCAGTTTGGCTGTTCTGTATAAGGGCAACAAGGATGGTGACGCCAGGTTGCTGTGCTTCAAAATCTTGTTTGATGTGATGGTAATTTTTGTTAATGAACAATCTGAAGATGAGCAAGGGTCCAAAGAATTGCAATCCATATCCAATACAAACTTTCTTCCTCTCTACCCTTCCTTGATTGAAGATGAAGATCCAATCCCCTTGTACGCGCAAAAGCTGCTTGTGATGCTGATTGATTATAGTTACATCAAAATTGCTGACATTCTACATCTGAAGATAGTCTTGCAATGCTTTGAGTTTTTGCTGGGCGATCTCTCAAGTGCAAATCAAGGTATAAGATATATCATGGACTTTGACAGCAATGTTGCTGTATTGCTAGAGTTAAGCAGGTCTCACGGAGGAAGTGTGGCAGATATAGCTTCAGAATGTGTTGTTTTGTTGTTCAAGGCAGCTCCAAGGGAAGGCACAGCTGGTCTACTAACTAATGTTCCAAAAGTTACTGCAATGCTTGAGTCTTGGCATAGAGGCATATCTCATTTGTTGGTGCAGCGAGTGCTACATGCGCTTGGTTATGCTTGTAGGCAGTATTTGTTACATGCAATGATATTGGCGATGCCGATTCCTGAGATTCCAAGAATTGAGGGCATAGTTTCTGAGCTTAAAGGTTCAGGTGTACCTACTTTAGCCACTGCTGCTTTTCATGTGGCTGTCGAGTTTCAGCGGCTTCCTCGCTGCATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

703

Amino Acids

79.55

Weight (kDa)

7.98

Isoelectric Point (pI)

40.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	151 - 196	5.2e-09	PPR repeat family
PPR_1	PF12854	179 - 211	2.9e-09	PPR repeat
PPR_2	PF13041	182 - 233	8.8e-13	PPR repeat family
PPR_2	PF13041	246 - 279	3.3e-08	PPR repeat family
PPR_3	PF13812	254 - 312	6.1e-12	Pentatricopeptide repeat domain
PPR_1	PF12854	261 - 294	5.1e-12	PPR repeat
PPR_2	PF13041	265 - 310	7.1e-17	PPR repeat family
PPR_long	PF17177	267 - 387	4.3e-08	Pentacotripeptide-repeat region of PRORP
PPR	PF01535	268 - 298	5.4e-09	PPR repeat
PPR_2	PF13041	338 - 383	5.1e-06	PPR repeat family
HEAT_ULK4	PF23606	420 - 541	7.6e-44	Serine/threonine-protein kinase ULK4-like, HEAT repeats
ARM_RUK	PF24970	565 - 701	1.1e-52	RUNKEL ARM-repeat domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006654)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77405
fragaria_vesca	FvH4_2g27550
malus_domestica	MD00G1030400.v1.1
prunus_persica	Prupe.1G492400_v2.0.a1
pyrus_communis	pycom15g30800
rosa_chinensis	RchiOBHm_Chr4g0420811 RchiOBHm_Chr4g0420821
rosa_laevigata	RLG00000007736 RLG00000011697
rosa_multiflora	Rmu_co8321563.1_g000001 Rmu_sc0005104.1_g000002 Rmu_sc0006997.1_g000002 Rmu_sc0006997.1_g000003
rosa_roxburghii	Rroxscaffold_5G00363250
rosa_rugosa	Rorug04G0166200 Rorug04G0166300 Rorug06G0261900
rosa_samantha	Rh4AG227600 Rh4BG230600 Rh4BG230700 Rh4BG230800 Rh4CG242600 Rh4CG242700 Rh6BG381400
rosa_wichuraiana	Rw4G019690 Rw6G032550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1746
AccB1I	GGYRCC	1 cut(s)	153
AccI	GTMKAC	2 cut(s)	1022, 1843
AccII	CGCG	3 cut(s)	159, 1235, 1577
AciI	CCGC	5 cut(s)	157, 509, 653, 1235, 2089
AclWI	GGATC	1 cut(s)	1553
AcoI	YGGCCR	1 cut(s)	1005
AcsI	RAATTY	3 cut(s)	200, 595, 1296
AcuI	CTGAAG	3 cut(s)	1494, 1661, 1773
AcyI	GRCGYC	1 cut(s)	1410
AfaI	GTAC	3 cut(s)	895, 1574, 2043
AfiI	CCNNNNNNNGG	8 cut(s)	150, 253, 312, 735, 903, 904, 1375, 1829
AflIII	ACRYGT	2 cut(s)	405, 759
AjnI	CCWGG	3 cut(s)	1070, 1265, 1412
AjuI	GAANNNNNNNTTGG	2 cut(s)	986, 1018
Alw26I	GTCTC	5 cut(s)	82, 237, 336, 704, 1764
AlwI	GGATC	1 cut(s)	1553
AoxI	GGCC	6 cut(s)	226, 381, 726, 1005, 1068, 1263
ApoI	RAATTY	3 cut(s)	200, 595, 1296
AspA2I	CCTAGG	1 cut(s)	475
AspLEI	GCGC	4 cut(s)	161, 1235, 1579, 1933
AspS9I	GGNCC	4 cut(s)	63, 227, 382, 1488
AsuC2I	CCSGG	2 cut(s)	639, 905
AsuHPI	GGTGA	2 cut(s)	448, 1418
AsuII	TTCGAA	1 cut(s)	1294
AvaII	GGWCC	2 cut(s)	63, 1488
AvrII	CCTAGG	1 cut(s)	475
BalI	TGGCCA	1 cut(s)	1007
BanI	GGYRCC	1 cut(s)	153
BccI	CCATC	8 cut(s)	104, 186, 461, 622, 1091, 1175, 1397, 1441
BciT130I	CCWGG	3 cut(s)	1072, 1267, 1414
BciVI	GTATCC	1 cut(s)	652
BclI	TGATCA	1 cut(s)	819
BcnI	CCSGG	2 cut(s)	639, 905
BcoDI	GTCTC	5 cut(s)	82, 237, 336, 704, 1764
BfaI	CTAG	4 cut(s)	476, 732, 1113, 1745
BfmI	CTRYAG	1 cut(s)	517
BfuAI	ACCTGC	1 cut(s)	1746
BfuI	GTATCC	1 cut(s)	652
BglI	GCCNNNNNGGC	1 cut(s)	144
BlnI	CCTAGG	1 cut(s)	475
Bme1390I	CCNGG	5 cut(s)	639, 905, 1072, 1267, 1414
Bme18I	GGWCC	2 cut(s)	63, 1488
BmgT120I	GGNCC	4 cut(s)	63, 227, 382, 1488
BmiI	GGNNCC	2 cut(s)	155, 1489
BmrFI	CCNGG	5 cut(s)	639, 905, 1072, 1267, 1414
BmrI	ACTGGG	3 cut(s)	304, 723, 1365
BmsI	GCATC	5 cut(s)	638, 972, 1195, 1584, 1971
BmuI	ACTGGG	3 cut(s)	304, 723, 1365
BpmI	CTGGAG	3 cut(s)	641, 1093, 1179
Bpu14I	TTCGAA	1 cut(s)	1294
BpuEI	CTTGAG	2 cut(s)	1669, 1898
BpuMI	CCSGG	2 cut(s)	639, 905
BsaBI	GATNNNNATC	1 cut(s)	1557
BsaHI	GRCGYC	1 cut(s)	1410
BsaI	GGTCTC	2 cut(s)	237, 1764
BsaJI	CCNNGG	4 cut(s)	59, 475, 1266, 1823
BsaWI	WCCGGW	1 cut(s)	544
BsaXI	ACNNNNNCTCC	6 cut(s)	62, 92, 701, 731, 1758, 1788
Bsc4I	CCNNNNNNNGG	8 cut(s)	150, 253, 312, 735, 903, 904, 1375, 1829
Bse118I	RCCGGY	1 cut(s)	143
Bse1I	ACTGG	4 cut(s)	115, 299, 718, 1371
Bse3DI	GCAATG	7 cut(s)	535, 1147, 1152, 1661, 1735, 1878, 1974
Bse8I	GATNNNNATC	1 cut(s)	1557
BseBI	CCWGG	3 cut(s)	1072, 1267, 1414
BseDI	CCNNGG	4 cut(s)	59, 475, 1266, 1823
BseGI	GGATG	5 cut(s)	96, 553, 987, 1276, 1408
BseJI	GATNNNNATC	1 cut(s)	1557
BseLI	CCNNNNNNNGG	8 cut(s)	150, 253, 312, 735, 903, 904, 1375, 1829
BseMI	GCAATG	7 cut(s)	535, 1147, 1152, 1661, 1735, 1878, 1974
BseMII	CTCAG	5 cut(s)	48, 87, 196, 1983, 2013
BseNI	ACTGG	4 cut(s)	115, 299, 718, 1371
BseRI	GAGGAG	1 cut(s)	751
BseYI	CCCAGC	2 cut(s)	229, 1672
BsgI	GTGCAG	3 cut(s)	739, 1224, 1934
Bsh1236I	CGCG	3 cut(s)	159, 1235, 1577
BshFI	GGCC	6 cut(s)	228, 383, 728, 1007, 1070, 1265
BshNI	GGYRCC	1 cut(s)	153
BsiSI	CCGG	6 cut(s)	144, 151, 545, 638, 656, 904
BslFI	GGGAC	1 cut(s)	103
BslI	CCNNNNNNNGG	8 cut(s)	150, 253, 312, 735, 903, 904, 1375, 1829
BsmAI	GTCTC	5 cut(s)	82, 237, 336, 704, 1764
BsmFI	GGGAC	1 cut(s)	103
BsnI	GGCC	6 cut(s)	228, 383, 728, 1007, 1070, 1265
Bso31I	GGTCTC	2 cut(s)	237, 1764
Bsp119I	TTCGAA	1 cut(s)	1294
Bsp143I	GATC	3 cut(s)	819, 1558, 1678
Bsp19I	CCATGG	1 cut(s)	59
BspACI	CCGC	5 cut(s)	157, 509, 653, 1235, 2089
BspANI	GGCC	6 cut(s)	228, 383, 728, 1007, 1070, 1265
BspCNI	CTCAG	5 cut(s)	47, 86, 195, 1984, 2014
BspFNI	CGCG	3 cut(s)	159, 1235, 1577
BspLI	GGNNCC	2 cut(s)	155, 1489
BspMI	ACCTGC	1 cut(s)	1746
BspPI	GGATC	1 cut(s)	1553
BspT104I	TTCGAA	1 cut(s)	1294
BspT107I	GGYRCC	1 cut(s)	153
BspTNI	GGTCTC	2 cut(s)	237, 1764
BsrDI	GCAATG	7 cut(s)	535, 1147, 1152, 1661, 1735, 1878, 1974
BsrFI	RCCGGY	1 cut(s)	143
BsrI	ACTGG	4 cut(s)	115, 299, 718, 1371
BssAI	RCCGGY	1 cut(s)	143
BssECI	CCNNGG	4 cut(s)	59, 475, 1266, 1823
BssMI	GATC	3 cut(s)	819, 1558, 1678
BssNAI	GTATAC	1 cut(s)	1023
BssNI	GRCGYC	1 cut(s)	1410
BssT1I	CCWWGG	3 cut(s)	59, 475, 1823
Bst1107I	GTATAC	1 cut(s)	1023
Bst2UI	CCWGG	3 cut(s)	1072, 1267, 1414
Bst4CI	ACNGT	2 cut(s)	450, 1225
Bst6I	CTCTTC	1 cut(s)	477
BstACI	GRCGYC	1 cut(s)	1410
BstAPI	GCANNNNNTGC	2 cut(s)	1585, 1921
BstBI	TTCGAA	1 cut(s)	1294
BstC8I	GCNNGC	1 cut(s)	653
BstDEI	CTNAG	5 cut(s)	34, 73, 182, 1992, 2022
BstDSI	CCRYGG	1 cut(s)	59
BstENI	CCTNNNNNAGG	1 cut(s)	251
BstF5I	GGATG	5 cut(s)	96, 553, 987, 1276, 1408
BstFNI	CGCG	3 cut(s)	159, 1235, 1577
BstHHI	GCGC	4 cut(s)	161, 1235, 1579, 1933
BstKTI	GATC	3 cut(s)	822, 1561, 1681
BstMAI	GTCTC	5 cut(s)	82, 237, 336, 704, 1764
BstMBI	GATC	3 cut(s)	819, 1558, 1678
BstMWI	GCNNNNNNNGC	9 cut(s)	144, 509, 631, 1585, 1594, 1784, 1921, 1930, 2060
BstNI	CCWGG	3 cut(s)	1072, 1267, 1414
BstNSI	RCATGY	6 cut(s)	217, 409, 763, 1931, 1967, 2107
BstSCI	CCNGG	5 cut(s)	637, 903, 1070, 1265, 1412
BstSFI	CTRYAG	1 cut(s)	517
BstUI	CGCG	3 cut(s)	159, 1235, 1577
BstX2I	RGATCY	1 cut(s)	1558
BstYI	RGATCY	1 cut(s)	1558
BstZ17I	GTATAC	1 cut(s)	1023
BsuI	GTATCC	1 cut(s)	652
BsuRI	GGCC	6 cut(s)	228, 383, 728, 1007, 1070, 1265
BtgI	CCRYGG	1 cut(s)	59
BtgZI	GCGATG	1 cut(s)	1994
BtsCI	GGATG	5 cut(s)	96, 553, 987, 1276, 1408
BtsI	GCAGTG	1 cut(s)	2055
BtsIMutI	CAGTG	1 cut(s)	2055
BveI	ACCTGC	1 cut(s)	1746
Cac8I	GCNNGC	1 cut(s)	653
CfoI	GCGC	4 cut(s)	161, 1235, 1579, 1933
Cfr10I	RCCGGY	1 cut(s)	143
Cfr13I	GGNCC	4 cut(s)	63, 227, 382, 1488
CseI	GACGC	1 cut(s)	1418
Csp6I	GTAC	3 cut(s)	894, 1573, 2042
CviQI	GTAC	3 cut(s)	894, 1573, 2042
DdeI	CTNAG	5 cut(s)	34, 73, 182, 1992, 2022
DpnI	GATC	3 cut(s)	821, 1560, 1680
DpnII	GATC	3 cut(s)	819, 1558, 1678
EaeI	YGGCCR	1 cut(s)	1005
Eam1104I	CTCTTC	1 cut(s)	477
EarI	CTCTTC	1 cut(s)	477
Eco130I	CCWWGG	3 cut(s)	59, 475, 1823
Eco147I	AGGCCT	1 cut(s)	1070
Eco31I	GGTCTC	2 cut(s)	237, 1764
Eco47I	GGWCC	2 cut(s)	63, 1488
Eco57I	CTGAAG	3 cut(s)	1494, 1661, 1773
EcoNI	CCTNNNNNAGG	1 cut(s)	251
EcoO109I	RGGNCCY	1 cut(s)	382
EcoRI	GAATTC	1 cut(s)	1296
EcoRII	CCWGG	3 cut(s)	1070, 1265, 1412
EcoT14I	CCWWGG	3 cut(s)	59, 475, 1823
ErhI	CCWWGG	3 cut(s)	59, 475, 1823
FalI	AAGNNNNNCTT	2 cut(s)	1634, 1666
FaqI	GGGAC	1 cut(s)	103
FauI	CCCGC	1 cut(s)	660
FbaI	TGATCA	1 cut(s)	819
FblI	GTMKAC	2 cut(s)	1022, 1843
FokI	GGATG	5 cut(s)	83, 560, 994, 1283, 1415
FspBI	CTAG	4 cut(s)	476, 732, 1113, 1745
GlaI	GCGC	4 cut(s)	160, 1234, 1578, 1932
GsaI	CCCAGC	2 cut(s)	233, 1676
GsuI	CTGGAG	3 cut(s)	641, 1093, 1179
HaeIII	GGCC	6 cut(s)	228, 383, 728, 1007, 1070, 1265
HapII	CCGG	6 cut(s)	144, 151, 545, 638, 656, 904
HgaI	GACGC	1 cut(s)	1418
HhaI	GCGC	4 cut(s)	161, 1235, 1579, 1933
Hin1I	GRCGYC	1 cut(s)	1410
Hin6I	GCGC	4 cut(s)	159, 1233, 1577, 1931
HinP1I	GCGC	4 cut(s)	159, 1233, 1577, 1931
HincII	GTYRAC	1 cut(s)	1107
HindII	GTYRAC	1 cut(s)	1107
HpaII	CCGG	6 cut(s)	144, 151, 545, 638, 656, 904
HphI	GGTGA	2 cut(s)	448, 1418
Hpy166II	GTNNAC	6 cut(s)	271, 1023, 1107, 1253, 1844, 2042
Hpy188I	TCNGA	7 cut(s)	70, 399, 768, 1474, 1641, 1792, 2023
Hpy188III	TCNNGA	5 cut(s)	601, 794, 1175, 1301, 1991
Hpy8I	GTNNAC	6 cut(s)	271, 1023, 1107, 1253, 1844, 2042
HpyAV	CCTTC	7 cut(s)	373, 598, 718, 972, 1050, 1548, 1823
HpyCH4III	ACNGT	2 cut(s)	450, 1225
HpyF10VI	GCNNNNNNNGC	9 cut(s)	144, 509, 631, 1585, 1594, 1784, 1921, 1930, 2060
HpyF3I	CTNAG	5 cut(s)	34, 73, 182, 1992, 2022
Hsp92I	GRCGYC	1 cut(s)	1410
HspAI	GCGC	4 cut(s)	159, 1233, 1577, 1931
Ksp22I	TGATCA	1 cut(s)	819
Kzo9I	GATC	3 cut(s)	819, 1558, 1678
LmnI	GCTCC	5 cut(s)	131, 166, 622, 631, 1825
LweI	GCATC	5 cut(s)	638, 972, 1195, 1584, 1971
MaeI	CTAG	4 cut(s)	476, 732, 1113, 1745
MaeIII	GTNAC	8 cut(s)	439, 802, 907, 1060, 1406, 1610, 1864, 1959
MalI	GATC	3 cut(s)	821, 1560, 1680
MboI	GATC	3 cut(s)	819, 1558, 1678
MflI	RGATCY	1 cut(s)	1558
MlsI	TGGCCA	1 cut(s)	1007
MluNI	TGGCCA	1 cut(s)	1007
MlyI	GAGTC	3 cut(s)	65, 1328, 1889
MmeI	TCCRAC	2 cut(s)	93, 687
Mox20I	TGGCCA	1 cut(s)	1007
MscI	TGGCCA	1 cut(s)	1007
MseI	TTAA	8 cut(s)	167, 258, 495, 945, 974, 1461, 1751, 2028
Msp20I	TGGCCA	1 cut(s)	1007
MspA1I	CMGCKG	4 cut(s)	233, 1157, 1838, 2089
MspI	CCGG	6 cut(s)	144, 151, 545, 638, 656, 904
MspR9I	CCNGG	5 cut(s)	639, 905, 1072, 1267, 1414
MvaI	CCWGG	3 cut(s)	1072, 1267, 1414
MvnI	CGCG	3 cut(s)	159, 1235, 1577
MwoI	GCNNNNNNNGC	9 cut(s)	144, 509, 631, 1585, 1594, 1784, 1921, 1930, 2060
NciI	CCSGG	2 cut(s)	639, 905
NcoI	CCATGG	1 cut(s)	59
NdeII	GATC	3 cut(s)	819, 1558, 1678
NlaIV	GGNNCC	2 cut(s)	155, 1489
NmuCI	GTSAC	1 cut(s)	1406
NspI	RCATGY	6 cut(s)	217, 409, 763, 1931, 1967, 2107
NspV	TTCGAA	1 cut(s)	1294
PceI	AGGCCT	1 cut(s)	1070
PciI	ACATGT	2 cut(s)	405, 759
PfeI	GAWTC	7 cut(s)	105, 370, 917, 994, 1304, 1987, 1996
PflFI	GACNNNGTC	2 cut(s)	74, 448
PleI	GAGTC	3 cut(s)	65, 1327, 1888
PpsI	GAGTC	3 cut(s)	65, 1327, 1888
PscI	ACATGT	2 cut(s)	405, 759
Psp6I	CCWGG	3 cut(s)	1070, 1265, 1412
PspFI	CCCAGC	2 cut(s)	229, 1672
PspGI	CCWGG	3 cut(s)	1070, 1265, 1412
PspN4I	GGNNCC	2 cut(s)	155, 1489
PspPI	GGNCC	4 cut(s)	63, 227, 382, 1488
PsuI	RGATCY	1 cut(s)	1558
PsyI	GACNNNGTC	2 cut(s)	74, 448
PvuII	CAGCTG	3 cut(s)	233, 1157, 1838
RsaI	GTAC	3 cut(s)	895, 1574, 2043
RsaNI	GTAC	3 cut(s)	894, 1573, 2042
SaqAI	TTAA	8 cut(s)	167, 258, 495, 945, 974, 1461, 1751, 2028
Sau3AI	GATC	3 cut(s)	819, 1558, 1678
Sau96I	GGNCC	4 cut(s)	63, 227, 382, 1488
SchI	GAGTC	3 cut(s)	65, 1328, 1889
ScrFI	CCNGG	5 cut(s)	639, 905, 1072, 1267, 1414
SfaNI	GCATC	5 cut(s)	638, 972, 1195, 1584, 1971
SfcI	CTRYAG	1 cut(s)	517
SfuI	TTCGAA	1 cut(s)	1294
SinI	GGWCC	2 cut(s)	63, 1488
SmlI	CTYRAG	2 cut(s)	1684, 1877
SmoI	CTYRAG	2 cut(s)	1684, 1877
SseBI	AGGCCT	1 cut(s)	1070
SsiI	CCGC	5 cut(s)	157, 509, 653, 1235, 2089
SspMI	CTAG	4 cut(s)	476, 732, 1113, 1745
StuI	AGGCCT	1 cut(s)	1070
StyD4I	CCNGG	5 cut(s)	637, 903, 1070, 1265, 1412
StyI	CCWWGG	3 cut(s)	59, 475, 1823
TaaI	ACNGT	2 cut(s)	450, 1225
TaqI	TCGA	4 cut(s)	282, 300, 1294, 2079
TauI	GCSGC	3 cut(s)	512, 1238, 2092
TfiI	GAWTC	7 cut(s)	105, 370, 917, 994, 1304, 1987, 1996
Tru1I	TTAA	8 cut(s)	167, 258, 495, 945, 974, 1461, 1751, 2028
Tru9I	TTAA	8 cut(s)	167, 258, 495, 945, 974, 1461, 1751, 2028
TscAI	CASTG	1 cut(s)	2062
TseFI	GTSAC	1 cut(s)	1406
Tsp45I	GTSAC	1 cut(s)	1406
TspGWI	ACGGA	2 cut(s)	153, 1779
TspRI	CASTG	1 cut(s)	2062
Tth111I	GACNNNGTC	2 cut(s)	74, 448
VpaK11BI	GGWCC	2 cut(s)	63, 1488
XagI	CCTNNNNNAGG	1 cut(s)	251
XapI	RAATTY	3 cut(s)	200, 595, 1296
XceI	RCATGY	6 cut(s)	217, 409, 763, 1931, 1967, 2107
XmaJI	CCTAGG	1 cut(s)	475
XmiI	GTMKAC	2 cut(s)	1022, 1843
XspI	CTAG	4 cut(s)	476, 732, 1113, 1745

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.