Rorug04G0166300

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Reverse (-)
29183640 .. 29186115
2476 bp
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UTR
Exon/CDS
Intron
Rorug04G0166300.1

Sequence Viewer

Length: 228 bp
ATGTCTTCCTCTCCAGGTGTTAAGGCACCAACTACAAGTACAAGGTTGAGAGCTGAGCAACGTGAAGGAACTATAGAACAATTTGTGGATCACAGCAAAGTCTCTTCGTGTTTCCATATAACATTTGCTAGATTGCTTGAAGTGAAAATGGAGCATAAATTTGAGGCTCGTATGCAAGGTGGCACAAAATTAAAGGAGAACTTACAATGTGCTCTGCAGCTTAGTTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

75

Amino Acids

8.44

Weight (kDa)

9.18

Isoelectric Point (pI)

62.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 25
AclWI GGATC 1 cut(s) 96
AcsI RAATTY 1 cut(s) 158
AfaI GTAC 1 cut(s) 40
AgsI TTSAA 1 cut(s) 140
AjnI CCWGG 1 cut(s) 13
AluBI AGCT 2 cut(s) 53, 220
AluI AGCT 2 cut(s) 53, 220
Alw21I GWGCWC 1 cut(s) 214
Alw26I GTCTC 1 cut(s) 106
AlwI GGATC 1 cut(s) 96
ApeKI GCWGC 1 cut(s) 217
ApoI RAATTY 1 cut(s) 158
BanI GGYRCC 1 cut(s) 25
Bbv12I GWGCWC 1 cut(s) 214
BciT130I CCWGG 1 cut(s) 15
BcoDI GTCTC 1 cut(s) 106
BfaI CTAG 1 cut(s) 129
BfmI CTRYAG 2 cut(s) 72, 215
BisI GCNGC 1 cut(s) 218
BlpI GCTNAGC 1 cut(s) 54
BlsI GCNGC 1 cut(s) 219
Bme1390I CCNGG 1 cut(s) 15
BmiI GGNNCC 1 cut(s) 27
BmrFI CCNGG 1 cut(s) 15
Bpu1102I GCTNAGC 1 cut(s) 54
BseBI CCWGG 1 cut(s) 15
BseMII CTCAG 1 cut(s) 45
BshNI GGYRCC 1 cut(s) 25
BsiHKAI GWGCWC 1 cut(s) 214
BsmAI GTCTC 1 cut(s) 106
Bsp1286I GDGCHC 1 cut(s) 214
Bsp143I GATC 1 cut(s) 88
Bsp1720I GCTNAGC 1 cut(s) 54
BspCNI CTCAG 1 cut(s) 46
BspLI GGNNCC 1 cut(s) 27
BspMAI CTGCAG 1 cut(s) 219
BspPI GGATC 1 cut(s) 96
BspT107I GGYRCC 1 cut(s) 25
BssMI GATC 1 cut(s) 88
Bst2UI CCWGG 1 cut(s) 15
Bst6I CTCTTC 1 cut(s) 109
BstDEI CTNAG 2 cut(s) 54, 221
BstKTI GATC 1 cut(s) 91
BstMAI GTCTC 1 cut(s) 106
BstMBI GATC 1 cut(s) 88
BstNI CCWGG 1 cut(s) 15
BstSCI CCNGG 1 cut(s) 13
BstSFI CTRYAG 2 cut(s) 72, 215
Csp6I GTAC 1 cut(s) 39
CviJI RGCY 3 cut(s) 53, 167, 220
CviKI_1 RGCY 3 cut(s) 53, 167, 220
CviQI GTAC 1 cut(s) 39
DdeI CTNAG 2 cut(s) 54, 221
DpnI GATC 1 cut(s) 90
DpnII GATC 1 cut(s) 88
Eam1104I CTCTTC 1 cut(s) 109
EarI CTCTTC 1 cut(s) 109
EcoRII CCWGG 1 cut(s) 13
FaiI YATR 5 cut(s) 74, 117, 119, 156, 173
FalI AAGNNNNNCTT 2 cut(s) 185, 217
Fnu4HI GCNGC 1 cut(s) 218
Fsp4HI GCNGC 1 cut(s) 218
FspBI CTAG 1 cut(s) 129
GluI GCNGC 1 cut(s) 218
HpyAV CCTTC 1 cut(s) 59
HpyCH4IV ACGT 1 cut(s) 61
HpyCH4V TGCA 2 cut(s) 175, 217
HpyF3I CTNAG 2 cut(s) 54, 221
HpySE526I ACGT 1 cut(s) 61
Kzo9I GATC 1 cut(s) 88
LmnI GCTCC 1 cut(s) 151
LpnPI CCDG 1 cut(s) 27
MaeI CTAG 1 cut(s) 129
MaeII ACGT 1 cut(s) 61
MalI GATC 1 cut(s) 90
MboI GATC 1 cut(s) 88
MboII GAAGA 1 cut(s) 96
MhlI GDGCHC 1 cut(s) 214
MluCI AATT 3 cut(s) 80, 158, 188
MnlI CCTC 2 cut(s) 19, 157
MseI TTAA 3 cut(s) 21, 191, 226
MspR9I CCNGG 1 cut(s) 15
MvaI CCWGG 1 cut(s) 15
NdeII GATC 1 cut(s) 88
NlaIV GGNNCC 1 cut(s) 27
PkrI GCNGC 1 cut(s) 219
Psp6I CCWGG 1 cut(s) 13
PspGI CCWGG 1 cut(s) 13
PspN4I GGNNCC 1 cut(s) 27
PstI CTGCAG 1 cut(s) 219
RsaI GTAC 1 cut(s) 40
RsaNI GTAC 1 cut(s) 39
SaqAI TTAA 3 cut(s) 21, 191, 226
SatI GCNGC 1 cut(s) 218
Sau3AI GATC 1 cut(s) 88
ScrFI CCNGG 1 cut(s) 15
SduI GDGCHC 1 cut(s) 214
SetI ASST 6 cut(s) 19, 47, 55, 64, 181, 222
SfcI CTRYAG 2 cut(s) 72, 215
Sse9I AATT 3 cut(s) 80, 158, 188
SspMI CTAG 1 cut(s) 129
StyD4I CCNGG 1 cut(s) 13
TaiI ACGT 1 cut(s) 64
TasI AATT 3 cut(s) 80, 158, 188
TatI WGTACW 1 cut(s) 38
Tru1I TTAA 3 cut(s) 21, 191, 226
Tru9I TTAA 3 cut(s) 21, 191, 226
TseI GCWGC 1 cut(s) 217
XapI RAATTY 1 cut(s) 158
XspI CTAG 1 cut(s) 129
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.