Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0006654

Physical Location & Seq

Genomic Coordinates Forward (+)

29173606 .. 29175343

Gene Structure 1738 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0166200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1641 bp

ATGAAGACATGCCCAACTCCCCATCTCATTCTCTCATTCCTGTTCATATGCACTTTTTTCTTCTCCCTGACCCACGCCGCCGGCGGCAAATGGCAGCTGCTTGTGAAAAGCGTCGGCATTTCCGCCATGCACATGCAGCTCCTCCACAACGACCGTGTCGTCATGTTCGACCGCACCGACTTCGGAAAATCCAACCTCCCCCTCCCCAACGGAGTCTGCCGCAACAACCCCCACGACACGGCGCTTAAAGTCGACTGCACGGCCCACTCCGCCGAGTACGACGTGGCGTCCAACAAAGTCCGTCCTCTGTTTGTGTACTCCGACGTGTGGTGCTCCTCGGGGTCAGTAAACCCCAGCGGAAGTCTAGTCCAGACTGGAGGTTTCAACGACGGAGACAGAAGAGTGAGGGTCTTTGACCCGTGTCCTACTTGTGACTGGAAAGAGATTGAGTTCGGGTTAGTCAACCGGAGATGGTACGCCACCAATCATATTCTTCCAGATGGAGGCCAGATAATCATCGGCGGACGGCGGCAGTTCAACTACGAGTTTTACCCCAAAAGTGGAGGCTCAATGAACGCGCACAGTTTACCTTTTCTTGTTGAGACAAGTGACGGCGACGCCATAGAGAACAATCTCTACCCTTTTGTCTTTCTCAACCTTGACGGCAATCTTTTTATCTTTGCCAACAATAGAGCTATATTGTACGACTATGTTGCTGGTAAAATAGTGAAGACGTACCCCACAATACCCGGTGGAGACCCGAGGTCGTATCCGAGCACTGGTTCAGCGGTGTTGCTACCTCTCAAGACTTCTAAAGGTCAGGCTGTGGCAGCTGAGGTTCTGGTTTGCGGTGGAGCTCCCAAAGGCTCTTATGTTAAGGCCGAAAGTGGGACTTTCGTGCCAGCATTGAAGACATGCGCTCGGATCATGATAACCGACCCGAACCCGCAGTGGGTTGTGGAAAACATGCCTGTAGCCAGAGTCATGGGTGACATGACGTTACTAGCCAACGGTGACGTTTTAATTATCAACGGTGCGGGATCAGGTACCGCGGGGTGGCAGCTCGGGCGGAACCCGATACTGAACCCGGTTGTTTACAAGCCCGATAATGCGGTCGGGTCACGGTTCGAGAAACAAAACCCGAGCACCATACCACGCATGTACCACTCCACTGCAATACTGCTACGTGATGGAAGGGTACTTGTTGGAGGTAGTAACCCTCATATTCGTTACGAGTTCTCAAACGTGCTTTTCCCAACCGAACTTGCTCTAGAAGCATTCTCCCCTAATTACTTGGACTCGCAATTTGCAAGTATACGTCCGAGCATCTATTCGCCTCAGTCACAAGTTACGGTTGGTTATGGACAGAAGCTAGCCGTTCGATTTTCGATAACGGGGAGAATACAACTGAACTCAGTGTCTGTTTCGATGGTGTCACCTTCATTTACTACGCATTCGTTCTCGATGAACCAGAGGCTAGTGGTTCTTGCTTCCGAGAATGTTAGAGCAGTGGGGAACTTGATGTTTGAAGTTCAGGTTACGACGCCGGCTTCCGGTAATCTTGCACCGTCCGGATATTATCTTGTATATGTGGTTCATCAGCAGATTCCAAGTGAGGGTATTTGGGTCAAGATTCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

546

Amino Acids

59.77

Weight (kDa)

8.72

Isoelectric Point (pI)

37.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyoxal_oxid_N	PF07250	43 - 431	7.1e-184	Glyoxal oxidase N-terminus
GO-like_E_set	PF09118	440 - 545	5e-27	Galactose oxidase-like, Early set domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006654)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77405
fragaria_vesca	FvH4_2g27550
malus_domestica	MD00G1030400.v1.1
prunus_persica	Prupe.1G492400_v2.0.a1
pyrus_communis	pycom15g30800
rosa_chinensis	RchiOBHm_Chr4g0420811 RchiOBHm_Chr4g0420821
rosa_laevigata	RLG00000007736 RLG00000011697
rosa_multiflora	Rmu_co8321563.1_g000001 Rmu_sc0005104.1_g000002 Rmu_sc0006997.1_g000002 Rmu_sc0006997.1_g000003
rosa_roxburghii	Rroxscaffold_5G00363250
rosa_rugosa	Rorug04G0166200 Rorug04G0166300 Rorug06G0261900
rosa_samantha	Rh4AG227600 Rh4BG230600 Rh4BG230700 Rh4BG230800 Rh4CG242600 Rh4CG242700 Rh6BG381400
rosa_wichuraiana	Rw4G019690 Rw6G032550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	158
Acc65I	GGTACC	1 cut(s)	1046
AccB1I	GGYRCC	1 cut(s)	1046
AccI	GTMKAC	2 cut(s)	252, 1315
AccII	CGCG	2 cut(s)	578, 1052
AccIII	TCCGGA	1 cut(s)	1571
AclWI	GGATC	2 cut(s)	932, 1048
AcyI	GRCGYC	3 cut(s)	287, 618, 1544
AfaI	GTAC	8 cut(s)	278, 317, 476, 704, 737, 1048, 1163, 1200
AflIII	ACRYGT	1 cut(s)	324
AgsI	TTSAA	4 cut(s)	385, 538, 910, 1529
AhdI	GACNNNNNGTC	2 cut(s)	286, 763
AjiI	CACGTC	2 cut(s)	283, 325
AluBI	AGCT	7 cut(s)	97, 139, 695, 833, 857, 1063, 1372
AluI	AGCT	7 cut(s)	97, 139, 695, 833, 857, 1063, 1372
Alw21I	GWGCWC	4 cut(s)	335, 779, 859, 1148
Alw26I	GTCTC	3 cut(s)	387, 596, 750
AlwI	GGATC	2 cut(s)	932, 1048
AlwNI	CAGNNNCTG	1 cut(s)	1421
Ama87I	CYCGRG	4 cut(s)	337, 760, 1064, 1141
Aor13HI	TCCGGA	1 cut(s)	1571
AoxI	GGCC	3 cut(s)	261, 505, 879
ApeKI	GCWGC	5 cut(s)	94, 97, 136, 830, 1060
ArsI	GACNNNNNNTTYG	2 cut(s)	1289, 1321
Asp718I	GGTACC	1 cut(s)	1046
AspLEI	GCGC	3 cut(s)	244, 580, 920
AspS9I	GGNCC	1 cut(s)	262
AsuC2I	CCSGG	2 cut(s)	750, 1088
AsuHPI	GGTGA	3 cut(s)	1001, 1025, 1428
AsuNHI	GCTAGC	1 cut(s)	1372
AvaI	CYCGRG	4 cut(s)	337, 760, 1064, 1141
BaeI	ACNNNNGTAYC	2 cut(s)	1145, 1178
BanI	GGYRCC	1 cut(s)	1046
BanII	GRGCYC	1 cut(s)	859
BbsI	GAAGAC	3 cut(s)	11, 737, 917
Bbv12I	GWGCWC	4 cut(s)	335, 779, 859, 1148
BbvCI	CCTCAGC	1 cut(s)	834
BbvI	GCAGC	5 cut(s)	84, 106, 148, 842, 1072
BccI	CCATC	5 cut(s)	30, 465, 494, 1184, 1423
BceAI	ACGGC	6 cut(s)	255, 276, 542, 628, 679, 1361
BcgI	CGANNNNNNTGC	4 cut(s)	163, 197, 695, 729
BciVI	GTATCC	1 cut(s)	780
BcnI	CCSGG	2 cut(s)	750, 1088
BcoDI	GTCTC	3 cut(s)	387, 596, 750
BfaI	CTAG	5 cut(s)	365, 1004, 1271, 1373, 1478
BfmI	CTRYAG	1 cut(s)	972
BfoI	RGCGCY	1 cut(s)	245
BfuI	GTATCC	1 cut(s)	780
BisI	GCNGC	9 cut(s)	78, 85, 95, 98, 137, 220, 530, 831, 1061
BlsI	GCNGC	9 cut(s)	79, 86, 96, 99, 138, 221, 531, 832, 1062
Bme1390I	CCNGG	2 cut(s)	750, 1088
BmeRI	GACNNNNNGTC	2 cut(s)	286, 763
BmeT110I	CYCGRG	4 cut(s)	337, 760, 1064, 1141
BmgBI	CACGTC	2 cut(s)	283, 325
BmgT120I	GGNCC	1 cut(s)	262
BmiI	GGNNCC	2 cut(s)	1048, 1073
BmrFI	CCNGG	2 cut(s)	750, 1088
BmsI	GCATC	1 cut(s)	1335
BmtI	GCTAGC	1 cut(s)	1376
BoxI	GACNNNNGTC	1 cut(s)	420
BpiI	GAAGAC	3 cut(s)	11, 737, 917
BpmI	CTGGAG	1 cut(s)	396
Bpu10I	CCTNAGC	1 cut(s)	834
BpuEI	CTTGAG	1 cut(s)	788
BpuMI	CCSGG	2 cut(s)	750, 1088
BsaAI	YACGTR	1 cut(s)	1187
BsaBI	GATNNNNATC	1 cut(s)	515
BsaHI	GRCGYC	3 cut(s)	287, 618, 1544
BsaI	GGTCTC	1 cut(s)	750
BsaJI	CCNNGG	3 cut(s)	336, 761, 1050
BsaWI	WCCGGW	3 cut(s)	465, 1553, 1571
Bse118I	RCCGGY	2 cut(s)	80, 1546
Bse1I	ACTGG	3 cut(s)	379, 440, 784
Bse8I	GATNNNNATC	1 cut(s)	515
BseAI	TCCGGA	1 cut(s)	1571
BseDI	CCNNGG	3 cut(s)	336, 761, 1050
BseJI	GATNNNNATC	1 cut(s)	515
BseMII	CTCAG	3 cut(s)	825, 1352, 1428
BseNI	ACTGG	3 cut(s)	379, 440, 784
BseRI	GAGGAG	2 cut(s)	131, 325
BseXI	GCAGC	5 cut(s)	84, 106, 148, 842, 1072
BseYI	CCCAGC	1 cut(s)	353
BsgI	GTGCAG	1 cut(s)	241
Bsh1236I	CGCG	2 cut(s)	578, 1052
Bsh1285I	CGRYCG	3 cut(s)	154, 172, 1116
BshFI	GGCC	3 cut(s)	263, 507, 881
BshNI	GGYRCC	1 cut(s)	1046
BsiEI	CGRYCG	3 cut(s)	154, 172, 1116
BsiHKAI	GWGCWC	4 cut(s)	335, 779, 859, 1148
BsiHKCI	CYCGRG	4 cut(s)	337, 760, 1064, 1141
BsiSI	CCGG	7 cut(s)	81, 466, 750, 1088, 1547, 1554, 1572
BslFI	GGGAC	1 cut(s)	904
BsmAI	GTCTC	3 cut(s)	387, 596, 750
BsmFI	GGGAC	1 cut(s)	904
BsmI	GAATGC	2 cut(s)	1277, 1453
BsnI	GGCC	3 cut(s)	263, 507, 881
Bso31I	GGTCTC	1 cut(s)	750
BsoBI	CYCGRG	4 cut(s)	337, 760, 1064, 1141
Bsp1286I	GDGCHC	4 cut(s)	335, 779, 859, 1148
Bsp13I	TCCGGA	1 cut(s)	1571
Bsp143I	GATC	2 cut(s)	924, 1040
BspANI	GGCC	3 cut(s)	263, 507, 881
BspCNI	CTCAG	3 cut(s)	826, 1351, 1427
BspEI	TCCGGA	1 cut(s)	1571
BspFNI	CGCG	2 cut(s)	578, 1052
BspHI	TCATGA	1 cut(s)	927
BspLI	GGNNCC	2 cut(s)	1048, 1073
BspOI	GCTAGC	1 cut(s)	1376
BspPI	GGATC	2 cut(s)	932, 1048
BspT107I	GGYRCC	1 cut(s)	1046
BspTNI	GGTCTC	1 cut(s)	750
BsrFI	RCCGGY	2 cut(s)	80, 1546
BsrI	ACTGG	3 cut(s)	379, 440, 784
BssAI	RCCGGY	2 cut(s)	80, 1546
BssECI	CCNNGG	3 cut(s)	336, 761, 1050
BssMI	GATC	2 cut(s)	924, 1040
BssNAI	GTATAC	1 cut(s)	1316
BssNI	GRCGYC	3 cut(s)	287, 618, 1544
Bst1107I	GTATAC	1 cut(s)	1316
Bst4CI	ACNGT	7 cut(s)	155, 584, 1013, 1034, 1125, 1354, 1569
Bst6I	CTCTTC	1 cut(s)	394
BstACI	GRCGYC	3 cut(s)	287, 618, 1544
BstBAI	YACGTR	1 cut(s)	1187
BstC8I	GCNNGC	4 cut(s)	82, 903, 1374, 1548
BstDEI	CTNAG	3 cut(s)	834, 1338, 1414
BstDSI	CCRYGG	1 cut(s)	1050
BstFNI	CGCG	2 cut(s)	578, 1052
BstH2I	RGCGCY	1 cut(s)	245
BstHHI	GCGC	3 cut(s)	244, 580, 920
BstKTI	GATC	2 cut(s)	927, 1043
BstMAI	GTCTC	3 cut(s)	387, 596, 750
BstMBI	GATC	2 cut(s)	924, 1040
BstMCI	CGRYCG	3 cut(s)	154, 172, 1116
BstMWI	GCNNNNNNNGC	5 cut(s)	136, 269, 830, 1066, 1274
BstNSI	RCATGY	5 cut(s)	12, 136, 918, 970, 1162
BstPAI	GACNNNNGTC	1 cut(s)	420
BstSCI	CCNGG	2 cut(s)	748, 1086
BstSFI	CTRYAG	1 cut(s)	972
BstUI	CGCG	2 cut(s)	578, 1052
BstV1I	GCAGC	5 cut(s)	84, 106, 148, 842, 1072
BstV2I	GAAGAC	3 cut(s)	11, 737, 917
BstXI	CCANNNNNNTGG	1 cut(s)	985
BstZ17I	GTATAC	1 cut(s)	1316
BsuI	GTATCC	1 cut(s)	780
BsuRI	GGCC	3 cut(s)	263, 507, 881
BtgI	CCRYGG	1 cut(s)	1050
BtrI	CACGTC	2 cut(s)	283, 325
BtsI	GCAGTG	3 cut(s)	956, 1170, 1515
BtsIMutI	CAGTG	5 cut(s)	777, 956, 1170, 1422, 1515
Cac8I	GCNNGC	4 cut(s)	82, 903, 1374, 1548
CaiI	CAGNNNCTG	1 cut(s)	1421
CciI	TCATGA	1 cut(s)	927
CfoI	GCGC	3 cut(s)	244, 580, 920
Cfr10I	RCCGGY	2 cut(s)	80, 1546
Cfr13I	GGNCC	1 cut(s)	262
Cfr42I	CCGCGG	1 cut(s)	1053
CseI	GACGC	4 cut(s)	100, 276, 626, 1552
Csp6I	GTAC	8 cut(s)	277, 316, 475, 703, 736, 1047, 1162, 1199
CviQI	GTAC	8 cut(s)	277, 316, 475, 703, 736, 1047, 1162, 1199
DdeI	CTNAG	3 cut(s)	834, 1338, 1414
DpnI	GATC	2 cut(s)	926, 1042
DpnII	GATC	2 cut(s)	924, 1040
DrdI	GACNNNNNNGTC	1 cut(s)	158
DriI	GACNNNNNGTC	2 cut(s)	286, 763
DseDI	GACNNNNNNGTC	1 cut(s)	158
Eam1104I	CTCTTC	1 cut(s)	394
Eam1105I	GACNNNNNGTC	2 cut(s)	286, 763
EarI	CTCTTC	1 cut(s)	394
EciI	GGCGGA	4 cut(s)	112, 259, 537, 1084
Ecl136II	GAGCTC	1 cut(s)	857
Eco24I	GRGCYC	1 cut(s)	859
Eco31I	GGTCTC	1 cut(s)	750
Eco53kI	GAGCTC	1 cut(s)	857
Eco88I	CYCGRG	4 cut(s)	337, 760, 1064, 1141
EcoICRI	GAGCTC	1 cut(s)	857
EcoT38I	GRGCYC	1 cut(s)	859
FalI	AAGNNNNNCTT	2 cut(s)	877, 909
FaqI	GGGAC	1 cut(s)	904
FauI	CCCGC	3 cut(s)	954, 1030, 1045
FauNDI	CATATG	1 cut(s)	47
FblI	GTMKAC	2 cut(s)	252, 1315
Fnu4HI	GCNGC	9 cut(s)	78, 85, 95, 98, 137, 220, 530, 831, 1061
FriOI	GRGCYC	1 cut(s)	859
Fsp4HI	GCNGC	9 cut(s)	78, 85, 95, 98, 137, 220, 530, 831, 1061
FspBI	CTAG	5 cut(s)	365, 1004, 1271, 1373, 1478
GlaI	GCGC	3 cut(s)	243, 579, 919
GluI	GCNGC	9 cut(s)	78, 85, 95, 98, 137, 220, 530, 831, 1061
GsaI	CCCAGC	1 cut(s)	357
GsuI	CTGGAG	1 cut(s)	396
HaeII	RGCGCY	1 cut(s)	245
HaeIII	GGCC	3 cut(s)	263, 507, 881
HapII	CCGG	7 cut(s)	81, 466, 750, 1088, 1547, 1554, 1572
HgaI	GACGC	4 cut(s)	100, 276, 626, 1552
HhaI	GCGC	3 cut(s)	244, 580, 920
Hin1I	GRCGYC	3 cut(s)	287, 618, 1544
Hin6I	GCGC	3 cut(s)	242, 578, 918
HinP1I	GCGC	3 cut(s)	242, 578, 918
HincII	GTYRAC	2 cut(s)	253, 463
HindII	GTYRAC	2 cut(s)	253, 463
HinfI	GANTC	5 cut(s)	213, 981, 1298, 1606, 1633
HpaII	CCGG	7 cut(s)	81, 466, 750, 1088, 1547, 1554, 1572
HphI	GGTGA	3 cut(s)	1001, 1025, 1428
Hpy166II	GTNNAC	7 cut(s)	253, 316, 349, 463, 587, 1096, 1316
Hpy188I	TCNGA	6 cut(s)	185, 322, 774, 924, 1323, 1495
Hpy188III	TCNNGA	9 cut(s)	370, 497, 805, 928, 1129, 1271, 1462, 1572, 1630
Hpy8I	GTNNAC	7 cut(s)	253, 316, 349, 463, 587, 1096, 1316
Hpy99I	CGWCG	6 cut(s)	116, 284, 326, 392, 620, 1546
HpyAV	CCTTC	2 cut(s)	1188, 1449
HpyCH4III	ACNGT	7 cut(s)	155, 584, 1013, 1034, 1125, 1354, 1569
HpyCH4IV	ACGT	8 cut(s)	282, 324, 734, 998, 1017, 1186, 1245, 1318
HpyCH4V	TGCA	7 cut(s)	51, 130, 136, 258, 1175, 1310, 1565
HpyF10VI	GCNNNNNNNGC	5 cut(s)	136, 269, 830, 1066, 1274
HpyF3I	CTNAG	3 cut(s)	834, 1338, 1414
HpySE526I	ACGT	8 cut(s)	282, 324, 734, 998, 1017, 1186, 1245, 1318
Hsp92I	GRCGYC	3 cut(s)	287, 618, 1544
HspAI	GCGC	3 cut(s)	242, 578, 918
Kpn2I	TCCGGA	1 cut(s)	1571
KpnI	GGTACC	1 cut(s)	1050
KroI	GCCGGC	2 cut(s)	80, 1546
KroNI	GCCGGC	2 cut(s)	82, 1548
KspI	CCGCGG	1 cut(s)	1053
Kzo9I	GATC	2 cut(s)	924, 1040
LmnI	GCTCC	4 cut(s)	144, 338, 854, 862
Lsp1109I	GCAGC	5 cut(s)	84, 106, 148, 842, 1072
LweI	GCATC	1 cut(s)	1335
MaeI	CTAG	5 cut(s)	365, 1004, 1271, 1373, 1478
MaeII	ACGT	8 cut(s)	282, 324, 734, 998, 1017, 1186, 1245, 1318
MalI	GATC	2 cut(s)	926, 1042
MboI	GATC	2 cut(s)	924, 1040
MboII	GAAGA	6 cut(s)	16, 52, 411, 485, 742, 922
MhlI	GDGCHC	4 cut(s)	335, 779, 859, 1148
MluCI	AATT	3 cut(s)	1023, 1288, 1304
MlyI	GAGTC	3 cut(s)	222, 990, 1292
MmeI	TCCRAC	4 cut(s)	216, 315, 345, 1186
MreI	CGCCGGCG	1 cut(s)	80
MroI	TCCGGA	1 cut(s)	1571
MroNI	GCCGGC	2 cut(s)	80, 1546
MseI	TTAA	3 cut(s)	246, 876, 1022
MslI	CAYNNNNRTG	1 cut(s)	131
MspA1I	CMGCKG	5 cut(s)	97, 357, 788, 833, 1052
MspI	CCGG	7 cut(s)	81, 466, 750, 1088, 1547, 1554, 1572
MspR9I	CCNGG	2 cut(s)	750, 1088
Mva1269I	GAATGC	2 cut(s)	1277, 1453
MvnI	CGCG	2 cut(s)	578, 1052
MwoI	GCNNNNNNNGC	5 cut(s)	136, 269, 830, 1066, 1274
NaeI	GCCGGC	2 cut(s)	82, 1548
NciI	CCSGG	2 cut(s)	750, 1088
NdeI	CATATG	1 cut(s)	47
NdeII	GATC	2 cut(s)	924, 1040
NgoMIV	GCCGGC	2 cut(s)	80, 1546
NheI	GCTAGC	1 cut(s)	1372
NlaIV	GGNNCC	2 cut(s)	1048, 1073
NmeAIII	GCCGAG	1 cut(s)	298
NmuCI	GTSAC	7 cut(s)	431, 608, 989, 1013, 1119, 1341, 1434
NspI	RCATGY	5 cut(s)	12, 136, 918, 970, 1162
PagI	TCATGA	1 cut(s)	927
PcsI	WCGNNNNNNNCGW	3 cut(s)	156, 165, 174
PctI	GAATGC	2 cut(s)	1277, 1453
PdiI	GCCGGC	2 cut(s)	82, 1548
PfeI	GAWTC	2 cut(s)	1606, 1633
PflFI	GACNNNGTC	1 cut(s)	155
PkrI	GCNGC	9 cut(s)	79, 86, 96, 99, 138, 221, 531, 832, 1062
PleI	GAGTC	3 cut(s)	221, 989, 1292
PpsI	GAGTC	3 cut(s)	221, 989, 1292
Ppu21I	YACGTR	1 cut(s)	1187
PshAI	GACNNNNGTC	1 cut(s)	420
Psp124BI	GAGCTC	1 cut(s)	859
PspFI	CCCAGC	1 cut(s)	353
PspN4I	GGNNCC	2 cut(s)	1048, 1073
PspPI	GGNCC	1 cut(s)	262
PsrI	GAACNNNNNNTAC	4 cut(s)	620, 652, 1578, 1610
PstNI	CAGNNNCTG	1 cut(s)	1421
PsyI	GACNNNGTC	1 cut(s)	155
PvuII	CAGCTG	2 cut(s)	97, 833
RsaI	GTAC	8 cut(s)	278, 317, 476, 704, 737, 1048, 1163, 1200
RsaNI	GTAC	8 cut(s)	277, 316, 475, 703, 736, 1047, 1162, 1199
RseI	CAYNNNNRTG	1 cut(s)	131
SacI	GAGCTC	1 cut(s)	859
SacII	CCGCGG	1 cut(s)	1053
SalI	GTCGAC	1 cut(s)	251
SaqAI	TTAA	3 cut(s)	246, 876, 1022
SatI	GCNGC	9 cut(s)	78, 85, 95, 98, 137, 220, 530, 831, 1061
Sau3AI	GATC	2 cut(s)	924, 1040
Sau96I	GGNCC	1 cut(s)	262
SchI	GAGTC	3 cut(s)	222, 990, 1292
ScrFI	CCNGG	2 cut(s)	750, 1088
SduI	GDGCHC	4 cut(s)	335, 779, 859, 1148
SfaNI	GCATC	1 cut(s)	1335
SfcI	CTRYAG	1 cut(s)	972
Sfr303I	CCGCGG	1 cut(s)	1053
SgrAI	CRCCGGYG	1 cut(s)	80
SgrBI	CCGCGG	1 cut(s)	1053
SmiMI	CAYNNNNRTG	1 cut(s)	131
SmlI	CTYRAG	1 cut(s)	803
SmoI	CTYRAG	1 cut(s)	803
Sse9I	AATT	3 cut(s)	1023, 1288, 1304
SspMI	CTAG	5 cut(s)	365, 1004, 1271, 1373, 1478
SstI	GAGCTC	1 cut(s)	859
StyD4I	CCNGG	2 cut(s)	748, 1086
TaaI	ACNGT	7 cut(s)	155, 584, 1013, 1034, 1125, 1354, 1569
TaiI	ACGT	8 cut(s)	285, 327, 737, 1001, 1020, 1189, 1248, 1321
TaqI	TCGA	7 cut(s)	168, 252, 1128, 1381, 1388, 1427, 1463
TasI	AATT	3 cut(s)	1023, 1288, 1304
TatI	WGTACW	1 cut(s)	315
TauI	GCSGC	4 cut(s)	80, 87, 222, 532
TfiI	GAWTC	2 cut(s)	1606, 1633
Tru1I	TTAA	3 cut(s)	246, 876, 1022
Tru9I	TTAA	3 cut(s)	246, 876, 1022
TscAI	CASTG	5 cut(s)	784, 956, 1177, 1422, 1515
TseFI	GTSAC	7 cut(s)	431, 608, 989, 1013, 1119, 1341, 1434
TseI	GCWGC	5 cut(s)	94, 97, 136, 830, 1060
Tsp45I	GTSAC	7 cut(s)	431, 608, 989, 1013, 1119, 1341, 1434
TspDTI	ATGAA	6 cut(s)	17, 34, 587, 1431, 1481, 1586
TspGWI	ACGGA	3 cut(s)	225, 290, 405
TspRI	CASTG	5 cut(s)	784, 956, 1177, 1422, 1515
Tth111I	GACNNNGTC	1 cut(s)	155
XbaI	TCTAGA	1 cut(s)	1270
XceI	RCATGY	5 cut(s)	12, 136, 918, 970, 1162
XmiI	GTMKAC	2 cut(s)	252, 1315
XspI	CTAG	5 cut(s)	365, 1004, 1271, 1373, 1478

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.