Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G77405 |
| fragaria_vesca | FvH4_2g27550 |
| malus_domestica | MD00G1030400.v1.1 |
| prunus_persica | Prupe.1G492400_v2.0.a1 |
| pyrus_communis | pycom15g30800 |
| rosa_chinensis | RchiOBHm_Chr4g0420811 RchiOBHm_Chr4g0420821 |
| rosa_laevigata | RLG00000007736 RLG00000011697 |
| rosa_multiflora | Rmu_co8321563.1_g000001 Rmu_sc0005104.1_g000002 Rmu_sc0006997.1_g000002 Rmu_sc0006997.1_g000003 |
| rosa_roxburghii | Rroxscaffold_5G00363250 |
| rosa_rugosa | Rorug04G0166200 Rorug04G0166300 Rorug06G0261900 |
| rosa_samantha | Rh4AG227600 Rh4BG230600 Rh4BG230700 Rh4BG230800 Rh4CG242600 Rh4CG242700 Rh6BG381400 |
| rosa_wichuraiana | Rw4G019690 Rw6G032550 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 146 |
| AcoI | YGGCCR | 1 cut(s) | 129 |
| AfaI | GTAC | 1 cut(s) | 19 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 27, 28 |
| AgsI | TTSAA | 1 cut(s) | 138 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 110, 142 |
| AluBI | AGCT | 1 cut(s) | 281 |
| AluI | AGCT | 1 cut(s) | 281 |
| AoxI | GGCC | 2 cut(s) | 129, 307 |
| ApeKI | GCWGC | 2 cut(s) | 62, 176 |
| AseI | ATTAAT | 1 cut(s) | 374 |
| AsuC2I | CCSGG | 1 cut(s) | 29 |
| AsuHPI | GGTGA | 1 cut(s) | 376 |
| BalI | TGGCCA | 1 cut(s) | 131 |
| BbvI | GCAGC | 2 cut(s) | 49, 188 |
| BccI | CCATC | 3 cut(s) | 215, 299, 323 |
| BcnI | CCSGG | 1 cut(s) | 29 |
| BfaI | CTAG | 1 cut(s) | 237 |
| BisI | GCNGC | 2 cut(s) | 63, 177 |
| BlsI | GCNGC | 2 cut(s) | 64, 178 |
| Bme1390I | CCNGG | 1 cut(s) | 29 |
| BmrFI | CCNGG | 1 cut(s) | 29 |
| BmsI | GCATC | 1 cut(s) | 96 |
| BpmI | CTGGAG | 1 cut(s) | 303 |
| BpuMI | CCSGG | 1 cut(s) | 29 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 27, 28 |
| Bse3DI | GCAATG | 2 cut(s) | 271, 276 |
| BseGI | GGATG | 1 cut(s) | 111 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 27, 28 |
| BseMI | GCAATG | 2 cut(s) | 271, 276 |
| BseRI | GAGGAG | 1 cut(s) | 355 |
| BseXI | GCAGC | 2 cut(s) | 49, 188 |
| BshFI | GGCC | 2 cut(s) | 131, 309 |
| BsiSI | CCGG | 1 cut(s) | 28 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 27, 28 |
| BsnI | GGCC | 2 cut(s) | 131, 309 |
| BspANI | GGCC | 2 cut(s) | 131, 309 |
| BsrDI | GCAATG | 2 cut(s) | 271, 276 |
| BssNAI | GTATAC | 1 cut(s) | 147 |
| Bst1107I | GTATAC | 1 cut(s) | 147 |
| Bst6I | CTCTTC | 1 cut(s) | 2 |
| BstC8I | GCNNGC | 1 cut(s) | 311 |
| BstF5I | GGATG | 1 cut(s) | 111 |
| BstSCI | CCNGG | 1 cut(s) | 27 |
| BstV1I | GCAGC | 2 cut(s) | 49, 188 |
| BstZ17I | GTATAC | 1 cut(s) | 147 |
| BsuRI | GGCC | 2 cut(s) | 131, 309 |
| BtsCI | GGATG | 1 cut(s) | 111 |
| Cac8I | GCNNGC | 1 cut(s) | 311 |
| Csp6I | GTAC | 1 cut(s) | 18 |
| CviAII | CATG | 4 cut(s) | 122, 161, 166, 400 |
| CviJI | RGCY | 6 cut(s) | 86, 131, 194, 281, 309, 370 |
| CviKI_1 | RGCY | 6 cut(s) | 86, 131, 194, 281, 309, 370 |
| CviQI | GTAC | 1 cut(s) | 18 |
| EaeI | YGGCCR | 1 cut(s) | 129 |
| Eam1104I | CTCTTC | 1 cut(s) | 2 |
| EarI | CTCTTC | 1 cut(s) | 2 |
| FaeI | CATG | 4 cut(s) | 125, 164, 169, 403 |
| FatI | CATG | 4 cut(s) | 121, 160, 165, 399 |
| FblI | GTMKAC | 1 cut(s) | 146 |
| Fnu4HI | GCNGC | 2 cut(s) | 63, 177 |
| FokI | GGATG | 1 cut(s) | 118 |
| Fsp4HI | GCNGC | 2 cut(s) | 63, 177 |
| FspBI | CTAG | 1 cut(s) | 237 |
| GluI | GCNGC | 2 cut(s) | 63, 177 |
| GsuI | CTGGAG | 1 cut(s) | 303 |
| HaeIII | GGCC | 2 cut(s) | 131, 309 |
| HapII | CCGG | 1 cut(s) | 28 |
| Hin1II | CATG | 4 cut(s) | 125, 164, 169, 403 |
| HinfI | GANTC | 3 cut(s) | 41, 118, 379 |
| HpaII | CCGG | 1 cut(s) | 28 |
| HphI | GGTGA | 1 cut(s) | 376 |
| Hpy166II | GTNNAC | 1 cut(s) | 147 |
| Hpy8I | GTNNAC | 1 cut(s) | 147 |
| HpyAV | CCTTC | 2 cut(s) | 96, 355 |
| HpyCH4V | TGCA | 4 cut(s) | 109, 264, 269, 337 |
| Hsp92II | CATG | 4 cut(s) | 125, 164, 169, 403 |
| LpnPI | CCDG | 3 cut(s) | 41, 267, 323 |
| Lsp1109I | GCAGC | 2 cut(s) | 49, 188 |
| LweI | GCATC | 1 cut(s) | 96 |
| MaeI | CTAG | 1 cut(s) | 237 |
| MaeIII | GTNAC | 2 cut(s) | 31, 184 |
| MboII | GAAGA | 3 cut(s) | 16, 19, 338 |
| MlsI | TGGCCA | 1 cut(s) | 131 |
| MluCI | AATT | 2 cut(s) | 254, 292 |
| MluNI | TGGCCA | 1 cut(s) | 131 |
| MlyI | GAGTC | 1 cut(s) | 373 |
| MnlI | CCTC | 5 cut(s) | 3, 184, 218, 280, 333 |
| Mox20I | TGGCCA | 1 cut(s) | 131 |
| MscI | TGGCCA | 1 cut(s) | 131 |
| MseI | TTAA | 3 cut(s) | 69, 98, 374 |
| Msp20I | TGGCCA | 1 cut(s) | 131 |
| MspA1I | CMGCKG | 1 cut(s) | 281 |
| MspI | CCGG | 1 cut(s) | 28 |
| MspR9I | CCNGG | 1 cut(s) | 29 |
| NciI | CCSGG | 1 cut(s) | 29 |
| NlaIII | CATG | 4 cut(s) | 125, 164, 169, 403 |
| PfeI | GAWTC | 2 cut(s) | 41, 118 |
| PkrI | GCNGC | 2 cut(s) | 64, 178 |
| PleI | GAGTC | 1 cut(s) | 373 |
| PpsI | GAGTC | 1 cut(s) | 373 |
| PshBI | ATTAAT | 1 cut(s) | 374 |
| PvuII | CAGCTG | 1 cut(s) | 281 |
| RsaI | GTAC | 1 cut(s) | 19 |
| RsaNI | GTAC | 1 cut(s) | 18 |
| SaqAI | TTAA | 3 cut(s) | 69, 98, 374 |
| SatI | GCNGC | 2 cut(s) | 63, 177 |
| SchI | GAGTC | 1 cut(s) | 373 |
| ScrFI | CCNGG | 1 cut(s) | 29 |
| SetI | ASST | 4 cut(s) | 238, 283, 291, 366 |
| SfaNI | GCATC | 1 cut(s) | 96 |
| Sse9I | AATT | 2 cut(s) | 254, 292 |
| SspMI | CTAG | 1 cut(s) | 237 |
| StyD4I | CCNGG | 1 cut(s) | 27 |
| TasI | AATT | 2 cut(s) | 254, 292 |
| TfiI | GAWTC | 2 cut(s) | 41, 118 |
| Tru1I | TTAA | 3 cut(s) | 69, 98, 374 |
| Tru9I | TTAA | 3 cut(s) | 69, 98, 374 |
| TseI | GCWGC | 2 cut(s) | 62, 176 |
| TspDTI | ATGAA | 4 cut(s) | 17, 131, 149, 374 |
| VspI | ATTAAT | 1 cut(s) | 374 |
| XmiI | GTMKAC | 1 cut(s) | 146 |
| XspI | CTAG | 1 cut(s) | 237 |