component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G02200 AT3G02200 AT5G15610 AT5G15610 |
| fragaria_vesca | FvH4_6g46660 FvH4_6g46660 |
| malus_domestica | MD09G1068800.v1.1 MD17G1061800.v1.1 MD17G1062000.v1.1 |
| prunus_persica | Prupe.3G252000_v2.0.a1 |
| pyrus_communis | pycom12433g00080 pycom17g06160 pycom17g06340 pycom17g06360 |
| rosa_chinensis | RchiOBHm_Chr2g0157101 RchiOBHm_Chr2g0165441 RchiOBHm_Chr2g0165551 |
| rosa_laevigata | RLG00000021531 RLG00000021538 RLG00000037000 |
| rosa_multiflora | Rmu_sc0004031.1_g000019 Rmu_sc0005425.1_g000018 Rmu_sc0016601.1_g000007 Rmu_sc0038644.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00085730 Rroxscaffold_2G00085750 Rroxscaffold_6G00392200 |
| rosa_rugosa | Rorug02G0515200 Rorug05G0483100 |
| rosa_samantha | Rh2AG582000 Rh2BG594200 Rh2CG564100 Rh2DG604100 Rh5AG531100 Rh5DG568600 Rh5DG568700 |
| rosa_wichuraiana | Rw2G003840 Rw2G048390 Rw2G048480 Rw2G048540 Rw5G028000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 493 |
| AccB1I | GGYRCC | 1 cut(s) | 1298 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 913, 1295, 1318 |
| AccI | GTMKAC | 1 cut(s) | 149 |
| AccII | CGCG | 1 cut(s) | 493 |
| AciI | CCGC | 1 cut(s) | 1177 |
| AclWI | GGATC | 3 cut(s) | 178, 1026, 1155 |
| AcoI | YGGCCR | 1 cut(s) | 576 |
| AcsI | RAATTY | 5 cut(s) | 406, 571, 788, 943, 1044 |
| AcuI | CTGAAG | 2 cut(s) | 312, 1058 |
| AcyI | GRCGYC | 1 cut(s) | 222 |
| AfaI | GTAC | 4 cut(s) | 95, 518, 713, 923 |
| AfeI | AGCGCT | 1 cut(s) | 565 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 90, 529, 749, 913, 1295, 1318 |
| AflII | CTTAAG | 1 cut(s) | 1220 |
| AflIII | ACRYGT | 2 cut(s) | 807, 1258 |
| AgeI | ACCGGT | 1 cut(s) | 90 |
| AgsI | TTSAA | 4 cut(s) | 511, 697, 892, 1277 |
| AjnI | CCWGG | 2 cut(s) | 212, 1302 |
| AjuI | GAANNNNNNNTTGG | 1 cut(s) | 1305 |
| AleI | CACNNNNGTG | 1 cut(s) | 782 |
| AluBI | AGCT | 9 cut(s) | 20, 164, 332, 637, 886, 963, 1231, 1280, 1292 |
| AluI | AGCT | 9 cut(s) | 20, 164, 332, 637, 886, 963, 1231, 1280, 1292 |
| Alw26I | GTCTC | 2 cut(s) | 358, 1061 |
| AlwI | GGATC | 3 cut(s) | 178, 1026, 1155 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 107, 913 |
| Aor51HI | AGCGCT | 1 cut(s) | 565 |
| AoxI | GGCC | 5 cut(s) | 125, 188, 216, 576, 1286 |
| ApeKI | GCWGC | 4 cut(s) | 47, 634, 938, 1307 |
| ApoI | RAATTY | 5 cut(s) | 406, 571, 788, 943, 1044 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 952, 984 |
| AseI | ATTAAT | 1 cut(s) | 1080 |
| AsiGI | ACCGGT | 1 cut(s) | 90 |
| AspA2I | CCTAGG | 1 cut(s) | 176 |
| AspLEI | GCGC | 4 cut(s) | 230, 495, 566, 847 |
| AspS9I | GGNCC | 6 cut(s) | 125, 189, 216, 532, 625, 973 |
| AsuNHI | GCTAGC | 1 cut(s) | 1231 |
| AvaII | GGWCC | 3 cut(s) | 532, 625, 973 |
| AvrII | CCTAGG | 1 cut(s) | 176 |
| BaeGI | GKGCMC | 1 cut(s) | 1303 |
| BalI | TGGCCA | 1 cut(s) | 578 |
| BanI | GGYRCC | 1 cut(s) | 1298 |
| BanII | GRGCYC | 1 cut(s) | 1028 |
| BbsI | GAAGAC | 2 cut(s) | 19, 803 |
| BbvCI | CCTCAGC | 1 cut(s) | 231 |
| BbvI | GCAGC | 4 cut(s) | 59, 646, 950, 1319 |
| BccI | CCATC | 6 cut(s) | 115, 161, 291, 587, 1138, 1289 |
| BceAI | ACGGC | 1 cut(s) | 181 |
| BciT130I | CCWGG | 2 cut(s) | 214, 1304 |
| BcoDI | GTCTC | 2 cut(s) | 358, 1061 |
| BfaI | CTAG | 4 cut(s) | 177, 419, 827, 1232 |
| BfmI | CTRYAG | 2 cut(s) | 840, 1138 |
| BfoI | RGCGCY | 2 cut(s) | 231, 567 |
| BfrI | CTTAAG | 1 cut(s) | 1220 |
| BfuAI | ACCTGC | 1 cut(s) | 493 |
| BglII | AGATCT | 1 cut(s) | 364 |
| BisI | GCNGC | 4 cut(s) | 48, 635, 939, 1308 |
| BlnI | CCTAGG | 1 cut(s) | 176 |
| BlsI | GCNGC | 4 cut(s) | 49, 636, 940, 1309 |
| BmcAI | AGTACT | 1 cut(s) | 713 |
| Bme1390I | CCNGG | 2 cut(s) | 214, 1304 |
| Bme18I | GGWCC | 3 cut(s) | 532, 625, 973 |
| BmgT120I | GGNCC | 6 cut(s) | 125, 189, 216, 532, 625, 973 |
| BmiI | GGNNCC | 4 cut(s) | 126, 534, 1098, 1300 |
| BmrFI | CCNGG | 2 cut(s) | 214, 1304 |
| BmsI | GCATC | 7 cut(s) | 119, 384, 497, 727, 850, 907, 1244 |
| BmtI | GCTAGC | 1 cut(s) | 1235 |
| BpiI | GAAGAC | 2 cut(s) | 19, 803 |
| BpmI | CTGGAG | 1 cut(s) | 548 |
| Bpu10I | CCTNAGC | 1 cut(s) | 231 |
| BpuEI | CTTGAG | 2 cut(s) | 389, 580 |
| BsaHI | GRCGYC | 1 cut(s) | 222 |
| BsaI | GGTCTC | 1 cut(s) | 358 |
| BsaJI | CCNNGG | 6 cut(s) | 176, 213, 759, 1100, 1302, 1312 |
| BsaWI | WCCGGW | 1 cut(s) | 90 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 90, 529, 749, 913, 1295, 1318 |
| Bse118I | RCCGGY | 2 cut(s) | 90, 224 |
| Bse1I | ACTGG | 3 cut(s) | 101, 531, 879 |
| Bse3DI | GCAATG | 2 cut(s) | 400, 1214 |
| BseBI | CCWGG | 2 cut(s) | 214, 1304 |
| BseDI | CCNNGG | 6 cut(s) | 176, 213, 759, 1100, 1302, 1312 |
| BseGI | GGATG | 5 cut(s) | 110, 769, 865, 922, 1149 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 90, 529, 749, 913, 1295, 1318 |
| BseMI | GCAATG | 2 cut(s) | 400, 1214 |
| BseMII | CTCAG | 4 cut(s) | 222, 369, 588, 1199 |
| BseNI | ACTGG | 3 cut(s) | 101, 531, 879 |
| BseRI | GAGGAG | 2 cut(s) | 92, 120 |
| BseSI | GKGCMC | 1 cut(s) | 1303 |
| BseXI | GCAGC | 4 cut(s) | 59, 646, 950, 1319 |
| Bsh1236I | CGCG | 1 cut(s) | 493 |
| BshFI | GGCC | 5 cut(s) | 127, 190, 218, 578, 1288 |
| BshNI | GGYRCC | 1 cut(s) | 1298 |
| BshTI | ACCGGT | 1 cut(s) | 90 |
| BsiSI | CCGG | 4 cut(s) | 91, 114, 187, 225 |
| BslFI | GGGAC | 1 cut(s) | 67 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 90, 529, 749, 913, 1295, 1318 |
| BsmAI | GTCTC | 2 cut(s) | 358, 1061 |
| BsmFI | GGGAC | 1 cut(s) | 67 |
| BsmI | GAATGC | 1 cut(s) | 1213 |
| BsnI | GGCC | 5 cut(s) | 127, 190, 218, 578, 1288 |
| Bso31I | GGTCTC | 1 cut(s) | 358 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1028, 1303 |
| Bsp1407I | TGTACA | 1 cut(s) | 516 |
| Bsp143I | GATC | 4 cut(s) | 183, 364, 1018, 1147 |
| BspACI | CCGC | 1 cut(s) | 1177 |
| BspANI | GGCC | 5 cut(s) | 127, 190, 218, 578, 1288 |
| BspCNI | CTCAG | 4 cut(s) | 223, 368, 589, 1198 |
| BspFNI | CGCG | 1 cut(s) | 493 |
| BspLI | GGNNCC | 4 cut(s) | 126, 534, 1098, 1300 |
| BspMI | ACCTGC | 1 cut(s) | 493 |
| BspOI | GCTAGC | 1 cut(s) | 1235 |
| BspPI | GGATC | 3 cut(s) | 178, 1026, 1155 |
| BspT107I | GGYRCC | 1 cut(s) | 1298 |
| BspTI | CTTAAG | 1 cut(s) | 1220 |
| BspTNI | GGTCTC | 1 cut(s) | 358 |
| BsrDI | GCAATG | 2 cut(s) | 400, 1214 |
| BsrFI | RCCGGY | 2 cut(s) | 90, 224 |
| BsrGI | TGTACA | 1 cut(s) | 516 |
| BsrI | ACTGG | 3 cut(s) | 101, 531, 879 |
| BssAI | RCCGGY | 2 cut(s) | 90, 224 |
| BssECI | CCNNGG | 6 cut(s) | 176, 213, 759, 1100, 1302, 1312 |
| BssMI | GATC | 4 cut(s) | 183, 364, 1018, 1147 |
| BssNAI | GTATAC | 1 cut(s) | 150 |
| BssNI | GRCGYC | 1 cut(s) | 222 |
| BssT1I | CCWWGG | 4 cut(s) | 176, 759, 1100, 1312 |
| Bst1107I | GTATAC | 1 cut(s) | 150 |
| Bst2UI | CCWGG | 2 cut(s) | 214, 1304 |
| Bst4CI | ACNGT | 3 cut(s) | 261, 385, 1273 |
| BstACI | GRCGYC | 1 cut(s) | 222 |
| BstAFI | CTTAAG | 1 cut(s) | 1220 |
| BstAUI | TGTACA | 1 cut(s) | 516 |
| BstC8I | GCNNGC | 7 cut(s) | 210, 226, 241, 245, 837, 1233, 1290 |
| BstDEI | CTNAG | 6 cut(s) | 231, 355, 597, 708, 993, 1185 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 527 |
| BstF5I | GGATG | 5 cut(s) | 110, 769, 865, 922, 1149 |
| BstFNI | CGCG | 1 cut(s) | 493 |
| BstH2I | RGCGCY | 2 cut(s) | 231, 567 |
| BstHHI | GCGC | 4 cut(s) | 230, 495, 566, 847 |
| BstKTI | GATC | 4 cut(s) | 186, 367, 1021, 1150 |
| BstMAI | GTCTC | 2 cut(s) | 358, 1061 |
| BstMBI | GATC | 4 cut(s) | 183, 364, 1018, 1147 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 236, 832, 869, 1121, 1298, 1307 |
| BstNI | CCWGG | 2 cut(s) | 214, 1304 |
| BstNSI | RCATGY | 4 cut(s) | 251, 811, 872, 1262 |
| BstSCI | CCNGG | 2 cut(s) | 212, 1302 |
| BstSFI | CTRYAG | 2 cut(s) | 840, 1138 |
| BstSLI | GKGCMC | 1 cut(s) | 1303 |
| BstUI | CGCG | 1 cut(s) | 493 |
| BstV1I | GCAGC | 4 cut(s) | 59, 646, 950, 1319 |
| BstV2I | GAAGAC | 2 cut(s) | 19, 803 |
| BstX2I | RGATCY | 3 cut(s) | 183, 364, 1018 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1132 |
| BstYI | RGATCY | 3 cut(s) | 183, 364, 1018 |
| BstZ17I | GTATAC | 1 cut(s) | 150 |
| BsuRI | GGCC | 5 cut(s) | 127, 190, 218, 578, 1288 |
| BtgZI | GCGATG | 1 cut(s) | 474 |
| BtsCI | GGATG | 5 cut(s) | 110, 769, 865, 922, 1149 |
| BtsIMutI | CAGTG | 6 cut(s) | 108, 381, 594, 821, 872, 1269 |
| BveI | ACCTGC | 1 cut(s) | 493 |
| Cac8I | GCNNGC | 7 cut(s) | 210, 226, 241, 245, 837, 1233, 1290 |
| CaiI | CAGNNNCTG | 2 cut(s) | 107, 913 |
| CfoI | GCGC | 4 cut(s) | 230, 495, 566, 847 |
| Cfr10I | RCCGGY | 2 cut(s) | 90, 224 |
| Cfr13I | GGNCC | 6 cut(s) | 125, 189, 216, 532, 625, 973 |
| CseI | GACGC | 1 cut(s) | 230 |
| Csp6I | GTAC | 4 cut(s) | 94, 517, 712, 922 |
| CspAI | ACCGGT | 1 cut(s) | 90 |
| CviAII | CATG | 6 cut(s) | 248, 602, 808, 869, 977, 1259 |
| CviQI | GTAC | 4 cut(s) | 94, 517, 712, 922 |
| DdeI | CTNAG | 6 cut(s) | 231, 355, 597, 708, 993, 1185 |
| DpnI | GATC | 4 cut(s) | 185, 366, 1020, 1149 |
| DpnII | GATC | 4 cut(s) | 183, 364, 1018, 1147 |
| DraI | TTTAAA | 1 cut(s) | 663 |
| EaeI | YGGCCR | 1 cut(s) | 576 |
| Eco130I | CCWWGG | 4 cut(s) | 176, 759, 1100, 1312 |
| Eco24I | GRGCYC | 1 cut(s) | 1028 |
| Eco31I | GGTCTC | 1 cut(s) | 358 |
| Eco47I | GGWCC | 3 cut(s) | 532, 625, 973 |
| Eco47III | AGCGCT | 1 cut(s) | 565 |
| Eco57I | CTGAAG | 2 cut(s) | 312, 1058 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 527 |
| EcoO109I | RGGNCCY | 2 cut(s) | 125, 532 |
| EcoRI | GAATTC | 1 cut(s) | 1044 |
| EcoRII | CCWGG | 2 cut(s) | 212, 1302 |
| EcoT14I | CCWWGG | 4 cut(s) | 176, 759, 1100, 1312 |
| EcoT38I | GRGCYC | 1 cut(s) | 1028 |
| ErhI | CCWWGG | 4 cut(s) | 176, 759, 1100, 1312 |
| FaeI | CATG | 6 cut(s) | 251, 605, 811, 872, 980, 1262 |
| FaqI | GGGAC | 1 cut(s) | 67 |
| FatI | CATG | 6 cut(s) | 247, 601, 807, 868, 976, 1258 |
| FauI | CCCGC | 1 cut(s) | 1184 |
| FblI | GTMKAC | 1 cut(s) | 149 |
| Fnu4HI | GCNGC | 4 cut(s) | 48, 635, 939, 1308 |
| FokI | GGATG | 5 cut(s) | 97, 776, 872, 929, 1156 |
| FriOI | GRGCYC | 1 cut(s) | 1028 |
| Fsp4HI | GCNGC | 4 cut(s) | 48, 635, 939, 1308 |
| FspBI | CTAG | 4 cut(s) | 177, 419, 827, 1232 |
| GlaI | GCGC | 4 cut(s) | 229, 494, 565, 846 |
| GluI | GCNGC | 4 cut(s) | 48, 635, 939, 1308 |
| GsuI | CTGGAG | 1 cut(s) | 548 |
| HaeII | RGCGCY | 2 cut(s) | 231, 567 |
| HaeIII | GGCC | 5 cut(s) | 127, 190, 218, 578, 1288 |
| HapII | CCGG | 4 cut(s) | 91, 114, 187, 225 |
| HgaI | GACGC | 1 cut(s) | 230 |
| HhaI | GCGC | 4 cut(s) | 230, 495, 566, 847 |
| Hin1I | GRCGYC | 1 cut(s) | 222 |
| Hin1II | CATG | 6 cut(s) | 251, 605, 811, 872, 980, 1262 |
| Hin6I | GCGC | 4 cut(s) | 228, 493, 564, 845 |
| HinP1I | GCGC | 4 cut(s) | 228, 493, 564, 845 |
| HinfI | GANTC | 5 cut(s) | 68, 80, 142, 689, 1034 |
| HpaII | CCGG | 4 cut(s) | 91, 114, 187, 225 |
| Hpy166II | GTNNAC | 2 cut(s) | 150, 556 |
| Hpy188III | TCNNGA | 5 cut(s) | 168, 368, 419, 453, 1038 |
| Hpy8I | GTNNAC | 2 cut(s) | 150, 556 |
| Hpy99I | CGWCG | 4 cut(s) | 76, 139, 202, 224 |
| HpyAV | CCTTC | 2 cut(s) | 850, 886 |
| HpyCH4III | ACNGT | 3 cut(s) | 261, 385, 1273 |
| HpyCH4IV | ACGT | 1 cut(s) | 137 |
| HpyCH4V | TGCA | 9 cut(s) | 47, 110, 239, 375, 393, 488, 740, 872, 1256 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 236, 832, 869, 1121, 1298, 1307 |
| HpyF3I | CTNAG | 6 cut(s) | 231, 355, 597, 708, 993, 1185 |
| HpySE526I | ACGT | 1 cut(s) | 137 |
| Hsp92I | GRCGYC | 1 cut(s) | 222 |
| Hsp92II | CATG | 6 cut(s) | 251, 605, 811, 872, 980, 1262 |
| HspAI | GCGC | 4 cut(s) | 228, 493, 564, 845 |
| KroI | GCCGGC | 1 cut(s) | 224 |
| KroNI | GCCGGC | 1 cut(s) | 226 |
| Kzo9I | GATC | 4 cut(s) | 183, 364, 1018, 1147 |
| LmnI | GCTCC | 1 cut(s) | 1204 |
| Lsp1109I | GCAGC | 4 cut(s) | 59, 646, 950, 1319 |
| LweI | GCATC | 7 cut(s) | 119, 384, 497, 727, 850, 907, 1244 |
| MaeI | CTAG | 4 cut(s) | 177, 419, 827, 1232 |
| MaeII | ACGT | 1 cut(s) | 137 |
| MaeIII | GTNAC | 5 cut(s) | 312, 460, 476, 592, 1171 |
| MalI | GATC | 4 cut(s) | 185, 366, 1020, 1149 |
| MboI | GATC | 4 cut(s) | 183, 364, 1018, 1147 |
| MboII | GAAGA | 6 cut(s) | 19, 193, 370, 746, 808, 992 |
| MfeI | CAATTG | 1 cut(s) | 780 |
| MflI | RGATCY | 3 cut(s) | 183, 364, 1018 |
| MhlI | GDGCHC | 2 cut(s) | 1028, 1303 |
| MlsI | TGGCCA | 1 cut(s) | 578 |
| MluCI | AATT | 6 cut(s) | 406, 571, 780, 788, 943, 1044 |
| MluNI | TGGCCA | 1 cut(s) | 578 |
| MlyI | GAGTC | 2 cut(s) | 89, 698 |
| MmeI | TCCRAC | 3 cut(s) | 54, 158, 831 |
| Mox20I | TGGCCA | 1 cut(s) | 578 |
| MreI | CGCCGGCG | 1 cut(s) | 224 |
| MroNI | GCCGGC | 1 cut(s) | 224 |
| MscI | TGGCCA | 1 cut(s) | 578 |
| MseI | TTAA | 6 cut(s) | 252, 497, 662, 1080, 1110, 1221 |
| MslI | CAYNNNNRTG | 2 cut(s) | 101, 782 |
| Msp20I | TGGCCA | 1 cut(s) | 578 |
| MspA1I | CMGCKG | 2 cut(s) | 332, 1292 |
| MspCI | CTTAAG | 1 cut(s) | 1220 |
| MspI | CCGG | 4 cut(s) | 91, 114, 187, 225 |
| MspR9I | CCNGG | 2 cut(s) | 214, 1304 |
| MunI | CAATTG | 1 cut(s) | 780 |
| Mva1269I | GAATGC | 1 cut(s) | 1213 |
| MvaI | CCWGG | 2 cut(s) | 214, 1304 |
| MvnI | CGCG | 1 cut(s) | 493 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 236, 832, 869, 1121, 1298, 1307 |
| NaeI | GCCGGC | 1 cut(s) | 226 |
| NdeII | GATC | 4 cut(s) | 183, 364, 1018, 1147 |
| NgoMIV | GCCGGC | 1 cut(s) | 224 |
| NheI | GCTAGC | 1 cut(s) | 1231 |
| NlaIII | CATG | 6 cut(s) | 251, 605, 811, 872, 980, 1262 |
| NlaIV | GGNNCC | 4 cut(s) | 126, 534, 1098, 1300 |
| NmuCI | GTSAC | 3 cut(s) | 312, 476, 592 |
| NspI | RCATGY | 4 cut(s) | 251, 811, 872, 1262 |
| OliI | CACNNNNGTG | 1 cut(s) | 782 |
| PciI | ACATGT | 2 cut(s) | 807, 1258 |
| PctI | GAATGC | 1 cut(s) | 1213 |
| PdiI | GCCGGC | 1 cut(s) | 226 |
| PfeI | GAWTC | 3 cut(s) | 68, 142, 1034 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 913, 1295, 1318 |
| PinAI | ACCGGT | 1 cut(s) | 90 |
| PkrI | GCNGC | 4 cut(s) | 49, 636, 940, 1309 |
| PleI | GAGTC | 2 cut(s) | 88, 697 |
| PpsI | GAGTC | 2 cut(s) | 88, 697 |
| PpuMI | RGGWCCY | 1 cut(s) | 532 |
| PscI | ACATGT | 2 cut(s) | 807, 1258 |
| PshBI | ATTAAT | 1 cut(s) | 1080 |
| Psp5II | RGGWCCY | 1 cut(s) | 532 |
| Psp6I | CCWGG | 2 cut(s) | 212, 1302 |
| PspGI | CCWGG | 2 cut(s) | 212, 1302 |
| PspN4I | GGNNCC | 4 cut(s) | 126, 534, 1098, 1300 |
| PspPI | GGNCC | 6 cut(s) | 125, 189, 216, 532, 625, 973 |
| PspPPI | RGGWCCY | 1 cut(s) | 532 |
| PstNI | CAGNNNCTG | 2 cut(s) | 107, 913 |
| PsuI | RGATCY | 3 cut(s) | 183, 364, 1018 |
| PvuII | CAGCTG | 2 cut(s) | 332, 1292 |
| RsaI | GTAC | 4 cut(s) | 95, 518, 713, 923 |
| RsaNI | GTAC | 4 cut(s) | 94, 517, 712, 922 |
| RseI | CAYNNNNRTG | 2 cut(s) | 101, 782 |
| SaqAI | TTAA | 6 cut(s) | 252, 497, 662, 1080, 1110, 1221 |
| SatI | GCNGC | 4 cut(s) | 48, 635, 939, 1308 |
| Sau3AI | GATC | 4 cut(s) | 183, 364, 1018, 1147 |
| Sau96I | GGNCC | 6 cut(s) | 125, 189, 216, 532, 625, 973 |
| ScaI | AGTACT | 1 cut(s) | 713 |
| SchI | GAGTC | 2 cut(s) | 89, 698 |
| ScrFI | CCNGG | 2 cut(s) | 214, 1304 |
| SduI | GDGCHC | 2 cut(s) | 1028, 1303 |
| SfaNI | GCATC | 7 cut(s) | 119, 384, 497, 727, 850, 907, 1244 |
| SfcI | CTRYAG | 2 cut(s) | 840, 1138 |
| SgrAI | CRCCGGYG | 1 cut(s) | 224 |
| SinI | GGWCC | 3 cut(s) | 532, 625, 973 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 101, 782 |
| SmlI | CTYRAG | 3 cut(s) | 368, 559, 1220 |
| SmoI | CTYRAG | 3 cut(s) | 368, 559, 1220 |
| Sse9I | AATT | 6 cut(s) | 406, 571, 780, 788, 943, 1044 |
| SsiI | CCGC | 1 cut(s) | 1177 |
| SspI | AATATT | 2 cut(s) | 613, 1252 |
| SspMI | CTAG | 4 cut(s) | 177, 419, 827, 1232 |
| StyD4I | CCNGG | 2 cut(s) | 212, 1302 |
| StyI | CCWWGG | 4 cut(s) | 176, 759, 1100, 1312 |
| TaaI | ACNGT | 3 cut(s) | 261, 385, 1273 |
| TaiI | ACGT | 1 cut(s) | 140 |
| TaqI | TCGA | 1 cut(s) | 303 |
| TasI | AATT | 6 cut(s) | 406, 571, 780, 788, 943, 1044 |
| TatI | WGTACW | 2 cut(s) | 516, 711 |
| TfiI | GAWTC | 3 cut(s) | 68, 142, 1034 |
| Tru1I | TTAA | 6 cut(s) | 252, 497, 662, 1080, 1110, 1221 |
| Tru9I | TTAA | 6 cut(s) | 252, 497, 662, 1080, 1110, 1221 |
| TscAI | CASTG | 6 cut(s) | 108, 388, 601, 821, 879, 1276 |
| TseFI | GTSAC | 3 cut(s) | 312, 476, 592 |
| TseI | GCWGC | 4 cut(s) | 47, 634, 938, 1307 |
| Tsp45I | GTSAC | 3 cut(s) | 312, 476, 592 |
| TspDTI | ATGAA | 7 cut(s) | 438, 993, 999, 1047, 1104, 1169, 1173 |
| TspGWI | ACGGA | 1 cut(s) | 685 |
| TspRI | CASTG | 6 cut(s) | 108, 388, 601, 821, 879, 1276 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 913, 1295, 1318 |
| Vha464I | CTTAAG | 1 cut(s) | 1220 |
| VpaK11BI | GGWCC | 3 cut(s) | 532, 625, 973 |
| VspI | ATTAAT | 1 cut(s) | 1080 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 527 |
| XapI | RAATTY | 5 cut(s) | 406, 571, 788, 943, 1044 |
| XbaI | TCTAGA | 1 cut(s) | 418 |
| XceI | RCATGY | 4 cut(s) | 251, 811, 872, 1262 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 280 |
| XmaJI | CCTAGG | 1 cut(s) | 176 |
| XmiI | GTMKAC | 1 cut(s) | 149 |
| XspI | CTAG | 4 cut(s) | 177, 419, 827, 1232 |
| ZrmI | AGTACT | 1 cut(s) | 713 |