component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G02200 AT3G02200 AT5G15610 AT5G15610 |
| fragaria_vesca | FvH4_6g46660 FvH4_6g46660 |
| malus_domestica | MD09G1068800.v1.1 MD17G1061800.v1.1 MD17G1062000.v1.1 |
| prunus_persica | Prupe.3G252000_v2.0.a1 |
| pyrus_communis | pycom12433g00080 pycom17g06160 pycom17g06340 pycom17g06360 |
| rosa_chinensis | RchiOBHm_Chr2g0157101 RchiOBHm_Chr2g0165441 RchiOBHm_Chr2g0165551 |
| rosa_laevigata | RLG00000021531 RLG00000021538 RLG00000037000 |
| rosa_multiflora | Rmu_sc0004031.1_g000019 Rmu_sc0005425.1_g000018 Rmu_sc0016601.1_g000007 Rmu_sc0038644.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00085730 Rroxscaffold_2G00085750 Rroxscaffold_6G00392200 |
| rosa_rugosa | Rorug02G0515200 Rorug05G0483100 |
| rosa_samantha | Rh2AG582000 Rh2BG594200 Rh2CG564100 Rh2DG604100 Rh5AG531100 Rh5DG568600 Rh5DG568700 |
| rosa_wichuraiana | Rw2G003840 Rw2G048390 Rw2G048480 Rw2G048540 Rw5G028000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 364 |
| AcsI | RAATTY | 1 cut(s) | 239 |
| AfaI | GTAC | 1 cut(s) | 164 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 364 |
| AflIII | ACRYGT | 1 cut(s) | 193 |
| AgsI | TTSAA | 4 cut(s) | 36, 148, 343, 411 |
| AjnI | CCWGG | 1 cut(s) | 253 |
| AleI | CACNNNNGTG | 1 cut(s) | 233 |
| AluBI | AGCT | 3 cut(s) | 129, 337, 415 |
| AluI | AGCT | 3 cut(s) | 129, 337, 415 |
| Alw26I | GTCTC | 1 cut(s) | 79 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 364 |
| ApeKI | GCWGC | 1 cut(s) | 389 |
| ApoI | RAATTY | 1 cut(s) | 239 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 404 |
| AspS9I | GGNCC | 2 cut(s) | 79, 425 |
| AvaII | GGWCC | 2 cut(s) | 79, 425 |
| BbsI | GAAGAC | 2 cut(s) | 192, 254 |
| BbvI | GCAGC | 1 cut(s) | 401 |
| BciT130I | CCWGG | 1 cut(s) | 255 |
| BcoDI | GTCTC | 1 cut(s) | 79 |
| BfmI | CTRYAG | 1 cut(s) | 291 |
| BisI | GCNGC | 1 cut(s) | 390 |
| BlsI | GCNGC | 1 cut(s) | 391 |
| BmcAI | AGTACT | 1 cut(s) | 164 |
| Bme1390I | CCNGG | 1 cut(s) | 255 |
| Bme18I | GGWCC | 2 cut(s) | 79, 425 |
| BmgT120I | GGNCC | 2 cut(s) | 79, 425 |
| BmrFI | CCNGG | 1 cut(s) | 255 |
| BmsI | GCATC | 1 cut(s) | 301 |
| BpiI | GAAGAC | 2 cut(s) | 192, 254 |
| BsaI | GGTCTC | 1 cut(s) | 79 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 364 |
| Bse1I | ACTGG | 1 cut(s) | 65 |
| BseBI | CCWGG | 1 cut(s) | 255 |
| BseGI | GGATG | 2 cut(s) | 220, 316 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 364 |
| BseMII | CTCAG | 2 cut(s) | 5, 398 |
| BseNI | ACTGG | 1 cut(s) | 65 |
| BseXI | GCAGC | 1 cut(s) | 401 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 364 |
| BsmAI | GTCTC | 1 cut(s) | 79 |
| Bso31I | GGTCTC | 1 cut(s) | 79 |
| BspCNI | CTCAG | 2 cut(s) | 6, 397 |
| BspTNI | GGTCTC | 1 cut(s) | 79 |
| BsrI | ACTGG | 1 cut(s) | 65 |
| Bst2UI | CCWGG | 1 cut(s) | 255 |
| Bst4CI | ACNGT | 1 cut(s) | 300 |
| BstC8I | GCNNGC | 3 cut(s) | 207, 288, 405 |
| BstDEI | CTNAG | 3 cut(s) | 14, 159, 384 |
| BstF5I | GGATG | 2 cut(s) | 220, 316 |
| BstMAI | GTCTC | 1 cut(s) | 79 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 320 |
| BstNI | CCWGG | 1 cut(s) | 255 |
| BstNSI | RCATGY | 4 cut(s) | 22, 197, 262, 323 |
| BstSCI | CCNGG | 1 cut(s) | 253 |
| BstSFI | CTRYAG | 1 cut(s) | 291 |
| BstV1I | GCAGC | 1 cut(s) | 401 |
| BstV2I | GAAGAC | 2 cut(s) | 192, 254 |
| BtsCI | GGATG | 2 cut(s) | 220, 316 |
| BtsIMutI | CAGTG | 2 cut(s) | 11, 272 |
| Cac8I | GCNNGC | 3 cut(s) | 207, 288, 405 |
| CaiI | CAGNNNCTG | 1 cut(s) | 364 |
| Cfr13I | GGNCC | 2 cut(s) | 79, 425 |
| CseI | GACGC | 1 cut(s) | 197 |
| Csp6I | GTAC | 1 cut(s) | 163 |
| CviAII | CATG | 6 cut(s) | 19, 194, 259, 320, 324, 429 |
| CviJI | RGCY | 6 cut(s) | 88, 129, 221, 337, 364, 415 |
| CviKI_1 | RGCY | 6 cut(s) | 88, 129, 221, 337, 364, 415 |
| CviQI | GTAC | 1 cut(s) | 163 |
| DdeI | CTNAG | 3 cut(s) | 14, 159, 384 |
| DraI | TTTAAA | 1 cut(s) | 114 |
| Eco31I | GGTCTC | 1 cut(s) | 79 |
| Eco47I | GGWCC | 2 cut(s) | 79, 425 |
| EcoRII | CCWGG | 1 cut(s) | 253 |
| EcoT22I | ATGCAT | 1 cut(s) | 325 |
| FaeI | CATG | 6 cut(s) | 22, 197, 262, 323, 327, 432 |
| FatI | CATG | 6 cut(s) | 18, 193, 258, 319, 323, 428 |
| Fnu4HI | GCNGC | 1 cut(s) | 390 |
| FokI | GGATG | 2 cut(s) | 227, 323 |
| Fsp4HI | GCNGC | 1 cut(s) | 390 |
| GluI | GCNGC | 1 cut(s) | 390 |
| HgaI | GACGC | 1 cut(s) | 197 |
| Hin1II | CATG | 6 cut(s) | 22, 197, 262, 323, 327, 432 |
| HindIII | AAGCTT | 1 cut(s) | 127 |
| HinfI | GANTC | 2 cut(s) | 140, 380 |
| Hpy188I | TCNGA | 1 cut(s) | 79 |
| Hpy188III | TCNNGA | 1 cut(s) | 52 |
| HpyAV | CCTTC | 4 cut(s) | 38, 205, 301, 337 |
| HpyCH4III | ACNGT | 1 cut(s) | 300 |
| HpyCH4V | TGCA | 1 cut(s) | 323 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 320 |
| HpyF3I | CTNAG | 3 cut(s) | 14, 159, 384 |
| Hsp92II | CATG | 6 cut(s) | 22, 197, 262, 323, 327, 432 |
| Lsp1109I | GCAGC | 1 cut(s) | 401 |
| LweI | GCATC | 1 cut(s) | 301 |
| MaeIII | GTNAC | 1 cut(s) | 9 |
| MboII | GAAGA | 2 cut(s) | 197, 259 |
| MfeI | CAATTG | 1 cut(s) | 231 |
| MluCI | AATT | 2 cut(s) | 231, 239 |
| MlyI | GAGTC | 1 cut(s) | 134 |
| MmeI | TCCRAC | 1 cut(s) | 282 |
| MnlI | CCTC | 5 cut(s) | 34, 78, 195, 211, 354 |
| Mph1103I | ATGCAT | 1 cut(s) | 325 |
| MseI | TTAA | 1 cut(s) | 113 |
| MslI | CAYNNNNRTG | 1 cut(s) | 233 |
| MspR9I | CCNGG | 1 cut(s) | 255 |
| MunI | CAATTG | 1 cut(s) | 231 |
| MvaI | CCWGG | 1 cut(s) | 255 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 320 |
| NlaIII | CATG | 6 cut(s) | 22, 197, 262, 323, 327, 432 |
| NmuCI | GTSAC | 1 cut(s) | 9 |
| NsiI | ATGCAT | 1 cut(s) | 325 |
| NspI | RCATGY | 4 cut(s) | 22, 197, 262, 323 |
| OliI | CACNNNNGTG | 1 cut(s) | 233 |
| PciI | ACATGT | 1 cut(s) | 193 |
| PfeI | GAWTC | 1 cut(s) | 380 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 364 |
| PkrI | GCNGC | 1 cut(s) | 391 |
| PleI | GAGTC | 1 cut(s) | 134 |
| PpsI | GAGTC | 1 cut(s) | 134 |
| PscI | ACATGT | 1 cut(s) | 193 |
| Psp6I | CCWGG | 1 cut(s) | 253 |
| PspGI | CCWGG | 1 cut(s) | 253 |
| PspPI | GGNCC | 2 cut(s) | 79, 425 |
| PstNI | CAGNNNCTG | 1 cut(s) | 364 |
| RsaI | GTAC | 1 cut(s) | 164 |
| RsaNI | GTAC | 1 cut(s) | 163 |
| RseI | CAYNNNNRTG | 1 cut(s) | 233 |
| SaqAI | TTAA | 1 cut(s) | 113 |
| SatI | GCNGC | 1 cut(s) | 390 |
| Sau96I | GGNCC | 2 cut(s) | 79, 425 |
| ScaI | AGTACT | 1 cut(s) | 164 |
| SchI | GAGTC | 1 cut(s) | 134 |
| ScrFI | CCNGG | 1 cut(s) | 255 |
| SetI | ASST | 5 cut(s) | 11, 131, 339, 348, 417 |
| SfaNI | GCATC | 1 cut(s) | 301 |
| SfcI | CTRYAG | 1 cut(s) | 291 |
| SinI | GGWCC | 2 cut(s) | 79, 425 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 233 |
| Sse9I | AATT | 2 cut(s) | 231, 239 |
| SspI | AATATT | 2 cut(s) | 67, 397 |
| StyD4I | CCNGG | 1 cut(s) | 253 |
| TaaI | ACNGT | 1 cut(s) | 300 |
| TasI | AATT | 2 cut(s) | 231, 239 |
| TatI | WGTACW | 1 cut(s) | 162 |
| TfiI | GAWTC | 1 cut(s) | 380 |
| Tru1I | TTAA | 1 cut(s) | 113 |
| Tru9I | TTAA | 1 cut(s) | 113 |
| TscAI | CASTG | 2 cut(s) | 18, 272 |
| TseFI | GTSAC | 1 cut(s) | 9 |
| TseI | GCWGC | 1 cut(s) | 389 |
| Tsp45I | GTSAC | 1 cut(s) | 9 |
| TspDTI | ATGAA | 2 cut(s) | 20, 88 |
| TspRI | CASTG | 2 cut(s) | 18, 272 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 364 |
| VpaK11BI | GGWCC | 2 cut(s) | 79, 425 |
| XapI | RAATTY | 1 cut(s) | 239 |
| XceI | RCATGY | 4 cut(s) | 22, 197, 262, 323 |
| ZrmI | AGTACT | 1 cut(s) | 164 |
| Zsp2I | ATGCAT | 1 cut(s) | 325 |