RLG00000027270

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
10170525 .. 10173106
2582 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000027270

Sequence Viewer

Length: 1248 bp
ATGGATTCAACTAAATATGGGCTCAGTATCTGTGATGGTAACATTCCTTGCTTCCCAGTTTTGAGCTCTACTGCAAAGAACTTGGCTTCACATGGAACTAGAAGCGCTGAGAGTCCGCCTCACCTAGGAAACCAACACTACCAGAGGAAGGGAAATGCACCACAATCTCCTGAAGATACTTCAGAAGATAATAATCTCCTGGAAAAGCTAATTGGGATGCCAATCCGTTACAGTTACAAGGATCTTAAAACTGCAACTAACAACTTCTCAAATAAGCTTGGGGAAGGAGGTTTTGCCTCAGTTTACTTGGGGGTTCTCCCAGATGGAACTCGACTTGCTGTGAAGAAGTTGGAAGCCAATAAATATCGGGGAAAGAAAGATTTTGAAGCTGAAGTTACCATCAGTGGCAGTATCCATCATCTGCACTTGGTCAGGCTCCGGGGCTTCTGTGCAAAGGGAAGCAATCGACTTCTTGCCTACGAGTACATGGCAAATGGATCCCTGGGCAAATGGATTTTCAGGGAAAAAAATGAAGAGTTCGTATTGGATTGGGGGACAAGATTCAACATAGCAGTGGGTATTGCCAAAGGAATAGCTTATCTCCATGAAGATTGTGATTTGAAGATTATTCACTGTGACATAAATCCTCATAACGTGCTCCTTGACGACAATTACAATGCCAAACTCTCAGATTTTGGTTTGGCAGTGCTGATGACCAGGGAGCAGAGCCATCTCCTCCAAACAGCACGACGAGGAGCTATGGAATACATGGCCCCAGAGTGGTTCTATACAAATCTTGGTGATGTTTCGGAGAAAATTGACGTGTACAGCTACGGAATGCTGCTGCTGGAGATCATTGGTGGAAGAAAGAACTTGGACGCATGTCACTATATCTCTGATGAAATTTATTTTCCATCGTATGCCTCCAAAATGTTGGAAGAAGGGAAACTCAAGGACATCTTCGACTCCAAGATGAGGATAGATGACGTTGACGGGAGGGTTTCTACTGCGGTTATGGTAGCATTGTGGTGTATACAGTTAGACATGACTTTGAGGCCACCAATGACCAAGGTTGTCCAAATGCTTCAAGGCATCTGCTCTGTTCCTCAGCCTCCAATTCTGCAGTTTCCTCCAAATGAATTACCCAAGGGGGGGACTTTCTCGGGTCCATCGGACTGCAACAGCGATGCCTACCTTTCTGCAGAGAGCGCCTCTCCGGGCCAAGATAACATAATTAACATTTGCTGA

Protein Analysis

416

Amino Acids

46.16

Weight (kDa)

5.91

Isoelectric Point (pI)

46.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 89 - 362 6.1e-39 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 90 - 360 3e-40 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1033
AciI CCGC 2 cut(s) 116, 1010
AclWI GGATC 3 cut(s) 249, 492, 505
AcsI RAATTY 1 cut(s) 903
AcuI CTGAAG 3 cut(s) 165, 192, 411
AfaI GTAC 2 cut(s) 485, 827
AfeI AGCGCT 1 cut(s) 106
AfiI CCNNNNNNNGG 6 cut(s) 125, 148, 780, 975, 1151, 1152
AflIII ACRYGT 1 cut(s) 822
AgsI TTSAA 5 cut(s) 9, 386, 565, 622, 1088
AjiI CACGTC 1 cut(s) 823
AjnI CCWGG 3 cut(s) 198, 501, 716
AjuI GAANNNNNNNTTGG 2 cut(s) 195, 227
AluBI AGCT 7 cut(s) 66, 208, 277, 389, 596, 758, 831
AluI AGCT 7 cut(s) 66, 208, 277, 389, 596, 758, 831
Alw21I GWGCWC 2 cut(s) 68, 660
AlwI GGATC 3 cut(s) 249, 492, 505
AlwNI CAGNNNCTG 1 cut(s) 30
Ama87I CYCGRG 1 cut(s) 1162
Aor51HI AGCGCT 1 cut(s) 106
AoxI GGCC 3 cut(s) 771, 1055, 1219
ApeKI GCWGC 2 cut(s) 841, 844
ApoI RAATTY 1 cut(s) 903
AspA2I CCTAGG 1 cut(s) 124
AspLEI GCGC 2 cut(s) 107, 1211
AspS9I GGNCC 3 cut(s) 772, 1166, 1219
AsuC2I CCSGG 2 cut(s) 440, 1218
AsuHPI GGTGA 2 cut(s) 113, 812
AvaI CYCGRG 1 cut(s) 1162
AvaII GGWCC 1 cut(s) 1166
AvrII CCTAGG 1 cut(s) 124
BamHI GGATCC 1 cut(s) 497
BanII GRGCYC 2 cut(s) 24, 68
Bbv12I GWGCWC 2 cut(s) 68, 660
BbvCI CCTCAGC 1 cut(s) 1107
BbvI GCAGC 2 cut(s) 828, 831
BccI CCATC 7 cut(s) 29, 317, 407, 423, 738, 922, 1177
BciT130I CCWGG 3 cut(s) 200, 503, 718
BciVI GTATCC 1 cut(s) 422
BcnI CCSGG 2 cut(s) 440, 1218
BfaI CTAG 2 cut(s) 99, 125
BfmI CTRYAG 2 cut(s) 1121, 1200
BfoI RGCGCY 2 cut(s) 108, 1212
BfuI GTATCC 1 cut(s) 422
BisI GCNGC 2 cut(s) 842, 845
BlnI CCTAGG 1 cut(s) 124
BlsI GCNGC 2 cut(s) 843, 846
Bme1390I CCNGG 5 cut(s) 200, 440, 503, 718, 1218
Bme18I GGWCC 1 cut(s) 1166
BmeT110I CYCGRG 1 cut(s) 1162
BmgBI CACGTC 1 cut(s) 823
BmgT120I GGNCC 3 cut(s) 772, 1166, 1219
BmiI GGNNCC 4 cut(s) 437, 499, 774, 1167
BmrFI CCNGG 5 cut(s) 200, 440, 503, 718, 1218
BmrI ACTGGG 1 cut(s) 50
BmsI GCATC 3 cut(s) 207, 1101, 1177
BmuI ACTGGG 1 cut(s) 50
BoxI GACNNNNGTC 1 cut(s) 882
BplI GAGNNNNNCTC 6 cut(s) 103, 135, 1196, 1228, 1198, 1230
BpmI CTGGAG 1 cut(s) 869
Bpu10I CCTNAGC 1 cut(s) 1107
BpuEI CTTGAG 1 cut(s) 935
BpuMI CCSGG 2 cut(s) 440, 1218
BsaBI GATNNNNATC 2 cut(s) 192, 221
BsaJI CCNNGG 7 cut(s) 124, 439, 501, 502, 717, 1068, 1146
Bsc4I CCNNNNNNNGG 6 cut(s) 125, 148, 780, 975, 1151, 1152
Bse1I ACTGG 1 cut(s) 56
Bse8I GATNNNNATC 2 cut(s) 192, 221
BseBI CCWGG 3 cut(s) 200, 503, 718
BseDI CCNNGG 7 cut(s) 124, 439, 501, 502, 717, 1068, 1146
BseGI GGATG 1 cut(s) 222
BseJI GATNNNNATC 2 cut(s) 192, 221
BseLI CCNNNNNNNGG 6 cut(s) 125, 148, 780, 975, 1151, 1152
BseMII CTCAG 5 cut(s) 37, 99, 312, 702, 1121
BseNI ACTGG 1 cut(s) 56
BseRI GAGGAG 2 cut(s) 725, 768
BseXI GCAGC 2 cut(s) 828, 831
BsgI GTGCAG 1 cut(s) 407
BshFI GGCC 3 cut(s) 773, 1057, 1221
BsiHKAI GWGCWC 2 cut(s) 68, 660
BsiHKCI CYCGRG 1 cut(s) 1162
BsiSI CCGG 2 cut(s) 439, 1217
BslFI GGGAC 2 cut(s) 568, 1168
BslI CCNNNNNNNGG 6 cut(s) 125, 148, 780, 975, 1151, 1152
BsmFI GGGAC 2 cut(s) 568, 1168
BsmI GAATGC 1 cut(s) 843
BsnI GGCC 3 cut(s) 773, 1057, 1221
BsoBI CYCGRG 1 cut(s) 1162
Bsp1286I GDGCHC 3 cut(s) 24, 68, 660
Bsp1407I TGTACA 1 cut(s) 825
Bsp143I GATC 3 cut(s) 241, 497, 852
BspACI CCGC 2 cut(s) 116, 1010
BspANI GGCC 3 cut(s) 773, 1057, 1221
BspCNI CTCAG 5 cut(s) 36, 100, 311, 701, 1120
BspLI GGNNCC 4 cut(s) 437, 499, 774, 1167
BspMAI CTGCAG 2 cut(s) 1125, 1204
BspPI GGATC 3 cut(s) 249, 492, 505
BsrGI TGTACA 1 cut(s) 825
BsrI ACTGG 1 cut(s) 56
BssECI CCNNGG 7 cut(s) 124, 439, 501, 502, 717, 1068, 1146
BssMI GATC 3 cut(s) 241, 497, 852
BssNAI GTATAC 1 cut(s) 1034
BssT1I CCWWGG 3 cut(s) 124, 1068, 1146
Bst1107I GTATAC 1 cut(s) 1034
Bst2UI CCWGG 3 cut(s) 200, 503, 718
Bst4CI ACNGT 3 cut(s) 233, 635, 1038
Bst6I CTCTTC 1 cut(s) 528
BstAUI TGTACA 1 cut(s) 825
BstDEI CTNAG 5 cut(s) 23, 108, 298, 688, 1107
BstENI CCTNNNNNAGG 1 cut(s) 123
BstF5I GGATG 1 cut(s) 222
BstH2I RGCGCY 2 cut(s) 108, 1212
BstHHI GCGC 2 cut(s) 107, 1211
BstKTI GATC 3 cut(s) 244, 500, 855
BstMBI GATC 3 cut(s) 241, 497, 852
BstMWI GCNNNNNNNGC 1 cut(s) 1208
BstNI CCWGG 3 cut(s) 200, 503, 718
BstNSI RCATGY 1 cut(s) 885
BstPAI GACNNNNGTC 1 cut(s) 882
BstSCI CCNGG 5 cut(s) 198, 438, 501, 716, 1216
BstSFI CTRYAG 2 cut(s) 1121, 1200
BstV1I GCAGC 2 cut(s) 828, 831
BstX2I RGATCY 2 cut(s) 241, 497
BstXI CCANNNNNNTGG 1 cut(s) 934
BstYI RGATCY 2 cut(s) 241, 497
BstZ17I GTATAC 1 cut(s) 1034
BsuI GTATCC 1 cut(s) 422
BsuRI GGCC 3 cut(s) 773, 1057, 1221
BtgZI GCGATG 1 cut(s) 1200
BtrI CACGTC 1 cut(s) 823
BtsCI GGATG 1 cut(s) 222
BtsI GCAGTG 2 cut(s) 579, 711
BtsIMutI CAGTG 4 cut(s) 409, 579, 631, 711
CaiI CAGNNNCTG 1 cut(s) 30
CfoI GCGC 2 cut(s) 107, 1211
Cfr13I GGNCC 3 cut(s) 772, 1166, 1219
CseI GACGC 1 cut(s) 887
Csp6I GTAC 2 cut(s) 484, 826
CviAII CATG 6 cut(s) 92, 487, 605, 769, 882, 1045
CviQI GTAC 2 cut(s) 484, 826
DdeI CTNAG 5 cut(s) 23, 108, 298, 688, 1107
DpnI GATC 3 cut(s) 243, 499, 854
DpnII GATC 3 cut(s) 241, 497, 852
Eam1104I CTCTTC 1 cut(s) 528
EarI CTCTTC 1 cut(s) 528
EciI GGCGGA 1 cut(s) 105
Ecl136II GAGCTC 1 cut(s) 66
Eco130I CCWWGG 3 cut(s) 124, 1068, 1146
Eco24I GRGCYC 2 cut(s) 24, 68
Eco47I GGWCC 1 cut(s) 1166
Eco47III AGCGCT 1 cut(s) 106
Eco53kI GAGCTC 1 cut(s) 66
Eco57I CTGAAG 3 cut(s) 165, 192, 411
Eco88I CYCGRG 1 cut(s) 1162
EcoICRI GAGCTC 1 cut(s) 66
EcoNI CCTNNNNNAGG 1 cut(s) 123
EcoRII CCWGG 3 cut(s) 198, 501, 716
EcoT14I CCWWGG 3 cut(s) 124, 1068, 1146
EcoT38I GRGCYC 2 cut(s) 24, 68
ErhI CCWWGG 3 cut(s) 124, 1068, 1146
FaeI CATG 6 cut(s) 95, 490, 608, 772, 885, 1048
FalI AAGNNNNNCTT 2 cut(s) 944, 976
FaqI GGGAC 2 cut(s) 568, 1168
FatI CATG 6 cut(s) 91, 486, 604, 768, 881, 1044
FblI GTMKAC 1 cut(s) 1033
Fnu4HI GCNGC 2 cut(s) 842, 845
FokI GGATG 1 cut(s) 229
FriOI GRGCYC 2 cut(s) 24, 68
Fsp4HI GCNGC 2 cut(s) 842, 845
FspBI CTAG 2 cut(s) 99, 125
GlaI GCGC 2 cut(s) 106, 1210
GluI GCNGC 2 cut(s) 842, 845
GsuI CTGGAG 1 cut(s) 869
HaeII RGCGCY 2 cut(s) 108, 1212
HaeIII GGCC 3 cut(s) 773, 1057, 1221
HapII CCGG 2 cut(s) 439, 1217
HgaI GACGC 1 cut(s) 887
HhaI GCGC 2 cut(s) 107, 1211
Hin1II CATG 6 cut(s) 95, 490, 608, 772, 885, 1048
Hin6I GCGC 2 cut(s) 105, 1209
HinP1I GCGC 2 cut(s) 105, 1209
HincII GTYRAC 1 cut(s) 991
HindII GTYRAC 1 cut(s) 991
HindIII AAGCTT 1 cut(s) 275
HinfI GANTC 4 cut(s) 5, 112, 561, 965
HpaII CCGG 2 cut(s) 439, 1217
HphI GGTGA 2 cut(s) 113, 812
Hpy166II GTNNAC 4 cut(s) 304, 826, 991, 1034
Hpy188I TCNGA 5 cut(s) 184, 691, 811, 898, 1174
Hpy188III TCNNGA 1 cut(s) 170
Hpy8I GTNNAC 4 cut(s) 304, 826, 991, 1034
Hpy99I CGWCG 1 cut(s) 753
HpyAV CCTTC 3 cut(s) 142, 278, 935
HpyCH4III ACNGT 3 cut(s) 233, 635, 1038
HpyCH4IV ACGT 3 cut(s) 654, 822, 987
HpyCH4V TGCA 8 cut(s) 74, 158, 254, 424, 452, 1123, 1179, 1202
HpyF10VI GCNNNNNNNGC 1 cut(s) 1208
HpyF3I CTNAG 5 cut(s) 23, 108, 298, 688, 1107
HpySE526I ACGT 3 cut(s) 654, 822, 987
Hsp92II CATG 6 cut(s) 95, 490, 608, 772, 885, 1048
HspAI GCGC 2 cut(s) 105, 1209
Kzo9I GATC 3 cut(s) 241, 497, 852
LmnI GCTCC 4 cut(s) 441, 663, 721, 755
Lsp1109I GCAGC 2 cut(s) 828, 831
LweI GCATC 3 cut(s) 207, 1101, 1177
MaeI CTAG 2 cut(s) 99, 125
MaeII ACGT 3 cut(s) 654, 822, 987
MaeIII GTNAC 6 cut(s) 38, 227, 233, 394, 635, 884
MalI GATC 3 cut(s) 243, 499, 854
MboI GATC 3 cut(s) 241, 497, 852
MboII GAAGA 9 cut(s) 185, 197, 355, 545, 620, 634, 876, 950, 952
MflI RGATCY 2 cut(s) 241, 497
MhlI GDGCHC 3 cut(s) 24, 68, 660
MluCI AATT 7 cut(s) 210, 670, 816, 903, 1116, 1139, 1233
MlyI GAGTC 2 cut(s) 121, 959
MmeI TCCRAC 2 cut(s) 330, 915
MseI TTAA 2 cut(s) 246, 1236
MslI CAYNNNNRTG 2 cut(s) 572, 1027
MspI CCGG 2 cut(s) 439, 1217
MspR9I CCNGG 5 cut(s) 200, 440, 503, 718, 1218
Mva1269I GAATGC 1 cut(s) 843
MvaI CCWGG 3 cut(s) 200, 503, 718
MwoI GCNNNNNNNGC 1 cut(s) 1208
NciI CCSGG 2 cut(s) 440, 1218
NdeII GATC 3 cut(s) 241, 497, 852
NlaIII CATG 6 cut(s) 95, 490, 608, 772, 885, 1048
NlaIV GGNNCC 4 cut(s) 437, 499, 774, 1167
NmuCI GTSAC 2 cut(s) 635, 884
NspI RCATGY 1 cut(s) 885
PasI CCCWGGG 1 cut(s) 502
PctI GAATGC 1 cut(s) 843
PfeI GAWTC 2 cut(s) 5, 561
PfoI TCCNGGA 1 cut(s) 198
PkrI GCNGC 2 cut(s) 843, 846
PleI GAGTC 2 cut(s) 120, 959
PpsI GAGTC 2 cut(s) 120, 959
PshAI GACNNNNGTC 1 cut(s) 882
Psp124BI GAGCTC 1 cut(s) 68
Psp6I CCWGG 3 cut(s) 198, 501, 716
PspGI CCWGG 3 cut(s) 198, 501, 716
PspN4I GGNNCC 4 cut(s) 437, 499, 774, 1167
PspPI GGNCC 3 cut(s) 772, 1166, 1219
PstI CTGCAG 2 cut(s) 1125, 1204
PstNI CAGNNNCTG 1 cut(s) 30
PsuI RGATCY 2 cut(s) 241, 497
RsaI GTAC 2 cut(s) 485, 827
RsaNI GTAC 2 cut(s) 484, 826
RseI CAYNNNNRTG 2 cut(s) 572, 1027
SacI GAGCTC 1 cut(s) 68
SaqAI TTAA 2 cut(s) 246, 1236
SatI GCNGC 2 cut(s) 842, 845
Sau3AI GATC 3 cut(s) 241, 497, 852
Sau96I GGNCC 3 cut(s) 772, 1166, 1219
SchI GAGTC 2 cut(s) 121, 959
ScrFI CCNGG 5 cut(s) 200, 440, 503, 718, 1218
SduI GDGCHC 3 cut(s) 24, 68, 660
SfaNI GCATC 3 cut(s) 207, 1101, 1177
SfcI CTRYAG 2 cut(s) 1121, 1200
SinI GGWCC 1 cut(s) 1166
SmiMI CAYNNNNRTG 2 cut(s) 572, 1027
SmlI CTYRAG 1 cut(s) 950
SmoI CTYRAG 1 cut(s) 950
Sse9I AATT 7 cut(s) 210, 670, 816, 903, 1116, 1139, 1233
SsiI CCGC 2 cut(s) 116, 1010
SspMI CTAG 2 cut(s) 99, 125
SstI GAGCTC 1 cut(s) 68
StyD4I CCNGG 5 cut(s) 198, 438, 501, 716, 1216
StyI CCWWGG 3 cut(s) 124, 1068, 1146
TaaI ACNGT 3 cut(s) 233, 635, 1038
TaiI ACGT 3 cut(s) 657, 825, 990
TaqI TCGA 3 cut(s) 331, 466, 963
TasI AATT 7 cut(s) 210, 670, 816, 903, 1116, 1139, 1233
TatI WGTACW 2 cut(s) 483, 825
TfiI GAWTC 2 cut(s) 5, 561
Tru1I TTAA 2 cut(s) 246, 1236
Tru9I TTAA 2 cut(s) 246, 1236
TscAI CASTG 4 cut(s) 409, 579, 638, 711
TseFI GTSAC 2 cut(s) 635, 884
TseI GCWGC 2 cut(s) 841, 844
Tsp45I GTSAC 2 cut(s) 635, 884
TspDTI ATGAA 4 cut(s) 546, 621, 915, 1152
TspGWI ACGGA 2 cut(s) 215, 849
TspRI CASTG 4 cut(s) 409, 579, 638, 711
VpaK11BI GGWCC 1 cut(s) 1166
XagI CCTNNNNNAGG 1 cut(s) 123
XapI RAATTY 1 cut(s) 903
XceI RCATGY 1 cut(s) 885
XmaJI CCTAGG 1 cut(s) 124
XmiI GTMKAC 1 cut(s) 1033
XspI CTAG 2 cut(s) 99, 125
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.