Rorug01G0336100

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Forward (+)
45447844 .. 45448612
769 bp
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UTR
Exon/CDS
Intron
Rorug01G0336100.1

Sequence Viewer

Length: 363 bp
ATGTTGGGAAGTGAAGGGATTGTAGTGGGGAAGGTGGGGAATGTAGTGGCCGGAAGTGGAGGTAGAGTGAACTTGGGAGCAGTGGGAAGGTTTGGCAATGTTGGATTAGGTAGAGATGGGATTTGGGTGCTTGGCAGAGGTGGGATTTGTGTTGTGGGTTTTGGCAGTGGTGGCAATGGTGGCAGAGGAGTTGGCATAGGCAGTGGAGGCACTGCACCCTTGGGAACCGGAATCAATGGAACTGATGTCTGCAACAGGTGCCTGGCGCCGAAGCTCATGTCAATGCTTGACAAACACAATGCTGCTACCATGATAGATAATAGGGAACAATGCTTGAGGCCTGCCATATTGGTTGAAAAGTAA

Protein Analysis

120

Amino Acids

11.88

Weight (kDa)

9.49

Isoelectric Point (pI)

13.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 258, 265
AcoI YGGCCR 1 cut(s) 48
AcyI GRCGYC 1 cut(s) 266
AgsI TTSAA 1 cut(s) 356
AjnI CCWGG 1 cut(s) 261
AluBI AGCT 1 cut(s) 274
AluI AGCT 1 cut(s) 274
AoxI GGCC 2 cut(s) 48, 338
ApeKI GCWGC 1 cut(s) 302
ArsI GACNNNNNNTTYG 2 cut(s) 263, 295
AspLEI GCGC 1 cut(s) 268
BanI GGYRCC 2 cut(s) 258, 265
BbvI GCAGC 1 cut(s) 289
BccI CCATC 1 cut(s) 110
BciT130I CCWGG 1 cut(s) 263
BfoI RGCGCY 1 cut(s) 269
BisI GCNGC 1 cut(s) 303
BlsI GCNGC 1 cut(s) 304
Bme1390I CCNGG 1 cut(s) 263
BmiI GGNNCC 3 cut(s) 226, 260, 267
BmrFI CCNGG 1 cut(s) 263
BpuEI CTTGAG 1 cut(s) 355
BsaHI GRCGYC 1 cut(s) 266
BsaJI CCNNGG 1 cut(s) 219
BsaWI WCCGGW 1 cut(s) 227
BsaXI ACNNNNNCTCC 2 cut(s) 51, 81
Bse3DI GCAATG 2 cut(s) 103, 181
BseBI CCWGG 1 cut(s) 263
BseDI CCNNGG 1 cut(s) 219
BseMI GCAATG 2 cut(s) 103, 181
BseRI GAGGAG 1 cut(s) 201
BseXI GCAGC 1 cut(s) 289
BsgI GTGCAG 1 cut(s) 198
BshFI GGCC 2 cut(s) 50, 340
BshNI GGYRCC 2 cut(s) 258, 265
BsiSI CCGG 2 cut(s) 51, 228
BsnI GGCC 2 cut(s) 50, 340
BspANI GGCC 2 cut(s) 50, 340
BspLI GGNNCC 3 cut(s) 226, 260, 267
BspT107I GGYRCC 2 cut(s) 258, 265
BsrDI GCAATG 2 cut(s) 103, 181
BssECI CCNNGG 1 cut(s) 219
BssNI GRCGYC 1 cut(s) 266
BssT1I CCWWGG 1 cut(s) 219
Bst2UI CCWGG 1 cut(s) 263
BstACI GRCGYC 1 cut(s) 266
BstAPI GCANNNNNTGC 1 cut(s) 258
BstC8I GCNNGC 1 cut(s) 342
BstH2I RGCGCY 1 cut(s) 269
BstHHI GCGC 1 cut(s) 268
BstMWI GCNNNNNNNGC 4 cut(s) 171, 180, 207, 258
BstNI CCWGG 1 cut(s) 263
BstSCI CCNGG 1 cut(s) 261
BstV1I GCAGC 1 cut(s) 289
BsuRI GGCC 2 cut(s) 50, 340
BtsI GCAGTG 4 cut(s) 87, 172, 208, 210
BtsIMutI CAGTG 4 cut(s) 87, 172, 208, 210
Cac8I GCNNGC 1 cut(s) 342
CfoI GCGC 1 cut(s) 268
CviAII CATG 2 cut(s) 277, 310
CviJI RGCY 3 cut(s) 50, 274, 340
CviKI_1 RGCY 3 cut(s) 50, 274, 340
DinI GGCGCC 1 cut(s) 267
EaeI YGGCCR 1 cut(s) 48
Eco130I CCWWGG 1 cut(s) 219
Eco147I AGGCCT 1 cut(s) 340
EcoRII CCWGG 1 cut(s) 261
EcoT14I CCWWGG 1 cut(s) 219
EgeI GGCGCC 1 cut(s) 267
EheI GGCGCC 1 cut(s) 267
ErhI CCWWGG 1 cut(s) 219
FaeI CATG 2 cut(s) 280, 313
FaiI YATR 4 cut(s) 197, 278, 311, 347
FatI CATG 2 cut(s) 276, 309
Fnu4HI GCNGC 1 cut(s) 303
Fsp4HI GCNGC 1 cut(s) 303
GlaI GCGC 1 cut(s) 267
GluI GCNGC 1 cut(s) 303
HaeII RGCGCY 1 cut(s) 269
HaeIII GGCC 2 cut(s) 50, 340
HapII CCGG 2 cut(s) 51, 228
HhaI GCGC 1 cut(s) 268
Hin1I GRCGYC 1 cut(s) 266
Hin1II CATG 2 cut(s) 280, 313
Hin6I GCGC 1 cut(s) 266
HinP1I GCGC 1 cut(s) 266
HinfI GANTC 1 cut(s) 231
HpaII CCGG 2 cut(s) 51, 228
Hpy166II GTNNAC 1 cut(s) 70
Hpy8I GTNNAC 1 cut(s) 70
HpyAV CCTTC 3 cut(s) 8, 25, 81
HpyCH4V TGCA 2 cut(s) 215, 252
HpyF10VI GCNNNNNNNGC 4 cut(s) 171, 180, 207, 258
Hsp92I GRCGYC 1 cut(s) 266
Hsp92II CATG 2 cut(s) 280, 313
HspAI GCGC 1 cut(s) 266
KasI GGCGCC 1 cut(s) 265
LmnI GCTCC 1 cut(s) 77
LpnPI CCDG 6 cut(s) 64, 241, 241, 248, 275, 354
Lsp1109I GCAGC 1 cut(s) 289
Mly113I GGCGCC 1 cut(s) 266
MmeI TCCRAC 1 cut(s) 82
MnlI CCTC 5 cut(s) 53, 131, 179, 200, 330
MslI CAYNNNNRTG 1 cut(s) 281
MspI CCGG 2 cut(s) 51, 228
MspR9I CCNGG 1 cut(s) 263
MvaI CCWGG 1 cut(s) 263
MwoI GCNNNNNNNGC 4 cut(s) 171, 180, 207, 258
NarI GGCGCC 1 cut(s) 266
NlaIII CATG 2 cut(s) 280, 313
NlaIV GGNNCC 3 cut(s) 226, 260, 267
PceI AGGCCT 1 cut(s) 340
PfeI GAWTC 1 cut(s) 231
PkrI GCNGC 1 cut(s) 304
PluTI GGCGCC 1 cut(s) 269
Psp6I CCWGG 1 cut(s) 261
PspGI CCWGG 1 cut(s) 261
PspN4I GGNNCC 3 cut(s) 226, 260, 267
RseI CAYNNNNRTG 1 cut(s) 281
SatI GCNGC 1 cut(s) 303
ScrFI CCNGG 1 cut(s) 263
SetI ASST 7 cut(s) 36, 64, 92, 112, 142, 260, 276
SfoI GGCGCC 1 cut(s) 267
SmiMI CAYNNNNRTG 1 cut(s) 281
SmlI CTYRAG 1 cut(s) 334
SmoI CTYRAG 1 cut(s) 334
SseBI AGGCCT 1 cut(s) 340
SspDI GGCGCC 1 cut(s) 265
StuI AGGCCT 1 cut(s) 340
StyD4I CCNGG 1 cut(s) 261
StyI CCWWGG 1 cut(s) 219
TfiI GAWTC 1 cut(s) 231
TscAI CASTG 4 cut(s) 87, 172, 208, 217
TseI GCWGC 1 cut(s) 302
TspRI CASTG 4 cut(s) 87, 172, 208, 217
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.