RLG00000027276

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
10218712 .. 10224018
5307 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000027276

Sequence Viewer

Length: 1386 bp
ATGTCGACGCTAATTCGGCGCGTGTGCTCTCTCGCGCGTGGCAGCCAACACCATTATCACTCCAACCATGAACCTTTCCACCACTCCCGTCGCACGAACCGGAACTTGCAGCAGTTCGCCGCCAGCTATAGTGGTTTTGGTTATGTTTTTAAGGGGTGGGTTGATGGCAATTCATCAACAGCTGCCAAGACCGGTAGTGGCATGTTAATTGCTGTGAAGACGATTGACCAAGGGGGTTTCCAGGGTCAAGAGGAATGGCTGACCGAAATTTACTATCTAGGAAGGTTGCGACATCCAAATCTTGTGAAGTTGTTGGGTTATTGCTTTGAGGACAACCACCCGCTTCTGGTTTATGAATTTATGCCTCATGGAAGCTTGGAGATTCATCTATCTGGAAGGGATTCTTACCTTCAACCACTTTCATGGACCCTGTGTATGAAGATTGCCCTTGGTGTTGCTAAGATTCTTGCATTTCTTCATGGTACTGAGGGAAAAGTGATCCATCAGGACGTTAAAAGCTCTAATATCCTGCTCGATTCAAACTTGGCTTCACATGGAACTCGAAGCGCTGAGAGTCCGCCTCACCAAGGATACCGACACTACCAGAGGAAGAGAAATGCACCACAATCTCCTGAAGATACTTCAGAAGATAATAATTTCCTGGAAAAGCTAATTGGGATGCCAATCCAATCCTATCCATCATCTGCACTTGGCCAGGCTCCGGGGCTTCTGTGCAAAGGGAGCAATCGACTTCTTGCCTATGAGTACATGGCAAATGGATCCCTGGACAAATGGATTTTCAGGAAAAAAAACGAAGAGTTCGTATTGGATTGGGAGACAAGATTCACCATAGCAGTGGGTATTGCCAAAGGACTAGCTTATCTCCATGAAGATTGTGATTTGAAGATTATTCACTGTGACATAAAGCCTCATAATGTGCTCCTTGACGACAATTACCATGCCAAAGTCTCAGATTTTGGTTTGGCACTGCTGATGGCCAGGGAGCAGAGCTGTGTCTTTACAGTAATTCGAGGAACTAGTGGGTACATTGCCCCAGAGTGGTTCACAAACGGTGGTATTTCGGAGAAAATTGATGTGTACAGCTATGGAATACTGCTGCTGGAGATCATTAGAGGAAGAAAGAACTTGGACCTAGATGATGAACGTTATCTTCCATCGTATGCCTCCAAAATGTTTGAAGAAGGGAAACTCAAGGACATCTTCGACCCCAAGATGAGGATAGATGACGTATACTGCGGTTATGGTAGCATTGTGGTGTATACAGTTAGACATGACTTTGAGGCCACCAATGGCCAAGGTTGTCCAAATGCTTCAAGGCATCTGCTCTGTTCCTCAGCCTCCAATTCCACGGCTTTATCCAAATGA

Protein Analysis

462

Amino Acids

51.9

Weight (kDa)

7.06

Isoelectric Point (pI)

42.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 46 - 181 2.2e-20 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 59 - 181 5.6e-18 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 235 - 380 2.3e-24 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 247 - 384 1.9e-30 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 3 cut(s) 5, 1251, 1280
AccII CGCG 3 cut(s) 21, 35, 37
AciI CCGC 4 cut(s) 120, 341, 578, 1257
AclI AACGTT 1 cut(s) 1165
AclWI GGATC 3 cut(s) 493, 774, 787
AcoI YGGCCR 3 cut(s) 712, 996, 1312
AcsI RAATTY 2 cut(s) 267, 356
AcuI CTGAAG 2 cut(s) 627, 654
AfaI GTAC 4 cut(s) 484, 767, 1046, 1100
AfeI AGCGCT 1 cut(s) 568
AfiI CCNNNNNNNGG 5 cut(s) 346, 587, 721, 1059, 1236
AgeI ACCGGT 1 cut(s) 191
AgsI TTSAA 5 cut(s) 413, 540, 904, 1199, 1335
AhlI ACTAGT 1 cut(s) 1037
AjnI CCWGG 5 cut(s) 240, 660, 714, 783, 998
AjuI GAANNNNNNNTTGG 2 cut(s) 657, 689
AluBI AGCT 8 cut(s) 126, 182, 375, 519, 670, 878, 1011, 1104
AluI AGCT 8 cut(s) 126, 182, 375, 519, 670, 878, 1011, 1104
Alw21I GWGCWC 2 cut(s) 29, 942
Alw26I GTCTC 2 cut(s) 830, 973
AlwI GGATC 3 cut(s) 493, 774, 787
Aor51HI AGCGCT 1 cut(s) 568
AoxI GGCC 4 cut(s) 712, 996, 1302, 1312
ApeKI GCWGC 4 cut(s) 42, 109, 182, 1117
ApoI RAATTY 2 cut(s) 267, 356
AsiGI ACCGGT 1 cut(s) 191
Asp700I GAANNNNTTC 1 cut(s) 400
AspLEI GCGC 3 cut(s) 21, 37, 569
AspS9I GGNCC 2 cut(s) 426, 1150
AsuC2I CCSGG 1 cut(s) 723
AsuHPI GGTGA 2 cut(s) 575, 838
AvaII GGWCC 2 cut(s) 426, 1150
BalI TGGCCA 3 cut(s) 714, 998, 1314
BamHI GGATCC 1 cut(s) 779
BbsI GAAGAC 1 cut(s) 224
Bbv12I GWGCWC 2 cut(s) 29, 942
BbvCI CCTCAGC 1 cut(s) 1354
BbvI GCAGC 4 cut(s) 54, 121, 169, 1104
BccI CCATC 5 cut(s) 158, 510, 706, 988, 1183
BciT130I CCWGG 5 cut(s) 242, 662, 716, 785, 1000
BciVI GTATCC 1 cut(s) 584
BcnI CCSGG 1 cut(s) 723
BcoDI GTCTC 2 cut(s) 830, 973
BcuI ACTAGT 1 cut(s) 1037
BfaI CTAG 4 cut(s) 278, 875, 1038, 1154
BfmI CTRYAG 1 cut(s) 127
BfoI RGCGCY 1 cut(s) 570
BfuI GTATCC 1 cut(s) 584
BisI GCNGC 5 cut(s) 43, 110, 120, 183, 1118
BlsI GCNGC 5 cut(s) 44, 111, 121, 184, 1119
Bme1390I CCNGG 6 cut(s) 242, 662, 716, 723, 785, 1000
Bme18I GGWCC 2 cut(s) 426, 1150
BmgT120I GGNCC 2 cut(s) 426, 1150
BmiI GGNNCC 3 cut(s) 428, 720, 781
BmrFI CCNGG 6 cut(s) 242, 662, 716, 723, 785, 1000
BmsI GCATC 2 cut(s) 669, 1348
BpiI GAAGAC 1 cut(s) 224
BplI GAGNNNNNCTC 2 cut(s) 565, 597
BpmI CTGGAG 1 cut(s) 1142
Bpu10I CCTNAGC 1 cut(s) 1354
BpuEI CTTGAG 1 cut(s) 1196
BpuMI CCSGG 1 cut(s) 723
BsaBI GATNNNNATC 1 cut(s) 683
BsaJI CCNNGG 9 cut(s) 229, 241, 448, 586, 722, 783, 999, 1315, 1368
BsaWI WCCGGW 2 cut(s) 99, 191
Bsc4I CCNNNNNNNGG 5 cut(s) 346, 587, 721, 1059, 1236
Bse118I RCCGGY 1 cut(s) 191
Bse3DI GCAATG 1 cut(s) 1047
Bse8I GATNNNNATC 1 cut(s) 683
BseBI CCWGG 5 cut(s) 242, 662, 716, 785, 1000
BseDI CCNNGG 9 cut(s) 229, 241, 448, 586, 722, 783, 999, 1315, 1368
BseGI GGATG 2 cut(s) 292, 684
BseJI GATNNNNATC 1 cut(s) 683
BseLI CCNNNNNNNGG 5 cut(s) 346, 587, 721, 1059, 1236
BseMI GCAATG 1 cut(s) 1047
BseMII CTCAG 4 cut(s) 477, 561, 984, 1368
BseXI GCAGC 4 cut(s) 54, 121, 169, 1104
BsgI GTGCAG 1 cut(s) 690
Bsh1236I CGCG 3 cut(s) 21, 35, 37
BshFI GGCC 4 cut(s) 714, 998, 1304, 1314
BshTI ACCGGT 1 cut(s) 191
BsiHKAI GWGCWC 2 cut(s) 29, 942
BsiSI CCGG 3 cut(s) 100, 192, 722
BslI CCNNNNNNNGG 5 cut(s) 346, 587, 721, 1059, 1236
BsmAI GTCTC 2 cut(s) 830, 973
BsnI GGCC 4 cut(s) 714, 998, 1304, 1314
Bsp1286I GDGCHC 2 cut(s) 29, 942
Bsp1407I TGTACA 1 cut(s) 1098
Bsp143I GATC 3 cut(s) 498, 779, 1125
BspACI CCGC 4 cut(s) 120, 341, 578, 1257
BspANI GGCC 4 cut(s) 714, 998, 1304, 1314
BspCNI CTCAG 4 cut(s) 478, 562, 983, 1367
BspFNI CGCG 3 cut(s) 21, 35, 37
BspLI GGNNCC 3 cut(s) 428, 720, 781
BspPI GGATC 3 cut(s) 493, 774, 787
BsrDI GCAATG 1 cut(s) 1047
BsrFI RCCGGY 1 cut(s) 191
BsrGI TGTACA 1 cut(s) 1098
BssAI RCCGGY 1 cut(s) 191
BssECI CCNNGG 9 cut(s) 229, 241, 448, 586, 722, 783, 999, 1315, 1368
BssMI GATC 3 cut(s) 498, 779, 1125
BssNAI GTATAC 2 cut(s) 1252, 1281
BssT1I CCWWGG 4 cut(s) 229, 448, 586, 1315
Bst1107I GTATAC 2 cut(s) 1252, 1281
Bst2UI CCWGG 5 cut(s) 242, 662, 716, 785, 1000
Bst4CI ACNGT 4 cut(s) 917, 1024, 1073, 1285
Bst6I CTCTTC 2 cut(s) 605, 810
BstAUI TGTACA 1 cut(s) 1098
BstC8I GCNNGC 1 cut(s) 124
BstDEI CTNAG 5 cut(s) 459, 486, 570, 970, 1354
BstDSI CCRYGG 1 cut(s) 1368
BstENI CCTNNNNNAGG 1 cut(s) 585
BstF5I GGATG 2 cut(s) 292, 684
BstFNI CGCG 3 cut(s) 21, 35, 37
BstH2I RGCGCY 1 cut(s) 570
BstHHI GCGC 3 cut(s) 21, 37, 569
BstKTI GATC 3 cut(s) 501, 782, 1128
BstMAI GTCTC 2 cut(s) 830, 973
BstMBI GATC 3 cut(s) 498, 779, 1125
BstMWI GCNNNNNNNGC 2 cut(s) 16, 741
BstNI CCWGG 5 cut(s) 242, 662, 716, 785, 1000
BstNSI RCATGY 1 cut(s) 205
BstSCI CCNGG 6 cut(s) 240, 660, 714, 721, 783, 998
BstSFI CTRYAG 1 cut(s) 127
BstUI CGCG 3 cut(s) 21, 35, 37
BstV1I GCAGC 4 cut(s) 54, 121, 169, 1104
BstV2I GAAGAC 1 cut(s) 224
BstX2I RGATCY 1 cut(s) 779
BstXI CCANNNNNNTGG 2 cut(s) 423, 856
BstYI RGATCY 1 cut(s) 779
BstZ17I GTATAC 2 cut(s) 1252, 1281
BsuI GTATCC 1 cut(s) 584
BsuRI GGCC 4 cut(s) 714, 998, 1304, 1314
BtgI CCRYGG 1 cut(s) 1368
BtsCI GGATG 2 cut(s) 292, 684
BtsI GCAGTG 2 cut(s) 861, 986
BtsIMutI CAGTG 3 cut(s) 861, 913, 986
Cac8I GCNNGC 1 cut(s) 124
CfoI GCGC 3 cut(s) 21, 37, 569
Cfr10I RCCGGY 1 cut(s) 191
Cfr13I GGNCC 2 cut(s) 426, 1150
CseI GACGC 1 cut(s) 16
Csp6I GTAC 4 cut(s) 483, 766, 1045, 1099
CspAI ACCGGT 1 cut(s) 191
CviQI GTAC 4 cut(s) 483, 766, 1045, 1099
DdeI CTNAG 5 cut(s) 459, 486, 570, 970, 1354
DpnI GATC 3 cut(s) 500, 781, 1127
DpnII GATC 3 cut(s) 498, 779, 1125
EaeI YGGCCR 3 cut(s) 712, 996, 1312
Eam1104I CTCTTC 2 cut(s) 605, 810
EarI CTCTTC 2 cut(s) 605, 810
EciI GGCGGA 1 cut(s) 567
Eco130I CCWWGG 4 cut(s) 229, 448, 586, 1315
Eco47I GGWCC 2 cut(s) 426, 1150
Eco47III AGCGCT 1 cut(s) 568
Eco57I CTGAAG 2 cut(s) 627, 654
EcoNI CCTNNNNNAGG 1 cut(s) 585
EcoRII CCWGG 5 cut(s) 240, 660, 714, 783, 998
EcoT14I CCWWGG 4 cut(s) 229, 448, 586, 1315
ErhI CCWWGG 4 cut(s) 229, 448, 586, 1315
FalI AAGNNNNNCTT 4 cut(s) 388, 420, 1205, 1237
FauI CCCGC 1 cut(s) 348
FblI GTMKAC 3 cut(s) 5, 1251, 1280
Fnu4HI GCNGC 5 cut(s) 43, 110, 120, 183, 1118
FokI GGATG 2 cut(s) 279, 691
Fsp4HI GCNGC 5 cut(s) 43, 110, 120, 183, 1118
FspBI CTAG 4 cut(s) 278, 875, 1038, 1154
GlaI GCGC 3 cut(s) 20, 36, 568
GluI GCNGC 5 cut(s) 43, 110, 120, 183, 1118
GsuI CTGGAG 1 cut(s) 1142
HaeII RGCGCY 1 cut(s) 570
HaeIII GGCC 4 cut(s) 714, 998, 1304, 1314
HapII CCGG 3 cut(s) 100, 192, 722
HgaI GACGC 1 cut(s) 16
HhaI GCGC 3 cut(s) 21, 37, 569
Hin6I GCGC 3 cut(s) 19, 35, 567
HinP1I GCGC 3 cut(s) 19, 35, 567
HincII GTYRAC 1 cut(s) 6
HindII GTYRAC 1 cut(s) 6
HindIII AAGCTT 1 cut(s) 373
HinfI GANTC 6 cut(s) 382, 401, 463, 536, 574, 843
HpaII CCGG 3 cut(s) 100, 192, 722
HphI GGTGA 2 cut(s) 575, 838
Hpy166II GTNNAC 5 cut(s) 6, 1065, 1099, 1252, 1281
Hpy188I TCNGA 3 cut(s) 646, 973, 1084
Hpy188III TCNNGA 5 cut(s) 248, 393, 506, 632, 802
Hpy8I GTNNAC 5 cut(s) 6, 1065, 1099, 1252, 1281
Hpy99I CGWCG 2 cut(s) 10, 93
HpyAV CCTTC 4 cut(s) 276, 390, 419, 1196
HpyCH4III ACNGT 4 cut(s) 917, 1024, 1073, 1285
HpyCH4IV ACGT 3 cut(s) 510, 1165, 1248
HpyCH4V TGCA 5 cut(s) 109, 470, 620, 707, 735
HpyF10VI GCNNNNNNNGC 2 cut(s) 16, 741
HpyF3I CTNAG 5 cut(s) 459, 486, 570, 970, 1354
HpySE526I ACGT 3 cut(s) 510, 1165, 1248
HspAI GCGC 3 cut(s) 19, 35, 567
Kzo9I GATC 3 cut(s) 498, 779, 1125
LmnI GCTCC 4 cut(s) 724, 741, 945, 1003
Lsp1109I GCAGC 4 cut(s) 54, 121, 169, 1104
LweI GCATC 2 cut(s) 669, 1348
MaeI CTAG 4 cut(s) 278, 875, 1038, 1154
MaeII ACGT 3 cut(s) 510, 1165, 1248
MaeIII GTNAC 1 cut(s) 917
MalI GATC 3 cut(s) 500, 781, 1127
MboI GATC 3 cut(s) 498, 779, 1125
MflI RGATCY 1 cut(s) 779
MhlI GDGCHC 2 cut(s) 29, 942
MlsI TGGCCA 3 cut(s) 714, 998, 1314
MluNI TGGCCA 3 cut(s) 714, 998, 1314
MlyI GAGTC 1 cut(s) 583
MmeI TCCRAC 1 cut(s) 87
Mox20I TGGCCA 3 cut(s) 714, 998, 1314
MroXI GAANNNNTTC 1 cut(s) 400
MscI TGGCCA 3 cut(s) 714, 998, 1314
MseI TTAA 3 cut(s) 150, 206, 513
MslI CAYNNNNRTG 3 cut(s) 421, 854, 1274
Msp20I TGGCCA 3 cut(s) 714, 998, 1314
MspA1I CMGCKG 1 cut(s) 182
MspI CCGG 3 cut(s) 100, 192, 722
MspR9I CCNGG 6 cut(s) 242, 662, 716, 723, 785, 1000
MvaI CCWGG 5 cut(s) 242, 662, 716, 785, 1000
MvnI CGCG 3 cut(s) 21, 35, 37
MwoI GCNNNNNNNGC 2 cut(s) 16, 741
NciI CCSGG 1 cut(s) 723
NdeII GATC 3 cut(s) 498, 779, 1125
NlaIV GGNNCC 3 cut(s) 428, 720, 781
NmuCI GTSAC 1 cut(s) 917
NspI RCATGY 1 cut(s) 205
PcsI WCGNNNNNNNCGW 1 cut(s) 819
PdmI GAANNNNTTC 1 cut(s) 400
PfeI GAWTC 5 cut(s) 382, 401, 463, 536, 843
PfoI TCCNGGA 1 cut(s) 660
PinAI ACCGGT 1 cut(s) 191
PkrI GCNGC 5 cut(s) 44, 111, 121, 184, 1119
PleI GAGTC 1 cut(s) 582
PpsI GAGTC 1 cut(s) 582
Psp1406I AACGTT 1 cut(s) 1165
Psp6I CCWGG 5 cut(s) 240, 660, 714, 783, 998
PspGI CCWGG 5 cut(s) 240, 660, 714, 783, 998
PspN4I GGNNCC 3 cut(s) 428, 720, 781
PspPI GGNCC 2 cut(s) 426, 1150
PsuI RGATCY 1 cut(s) 779
PvuII CAGCTG 1 cut(s) 182
RsaI GTAC 4 cut(s) 484, 767, 1046, 1100
RsaNI GTAC 4 cut(s) 483, 766, 1045, 1099
RseI CAYNNNNRTG 3 cut(s) 421, 854, 1274
SalI GTCGAC 1 cut(s) 4
SaqAI TTAA 3 cut(s) 150, 206, 513
SatI GCNGC 5 cut(s) 43, 110, 120, 183, 1118
Sau3AI GATC 3 cut(s) 498, 779, 1125
Sau96I GGNCC 2 cut(s) 426, 1150
SchI GAGTC 1 cut(s) 583
ScrFI CCNGG 6 cut(s) 242, 662, 716, 723, 785, 1000
SduI GDGCHC 2 cut(s) 29, 942
SfaNI GCATC 2 cut(s) 669, 1348
SfcI CTRYAG 1 cut(s) 127
SinI GGWCC 2 cut(s) 426, 1150
SmiMI CAYNNNNRTG 3 cut(s) 421, 854, 1274
SmlI CTYRAG 1 cut(s) 1211
SmoI CTYRAG 1 cut(s) 1211
SpeI ACTAGT 1 cut(s) 1037
SsiI CCGC 4 cut(s) 120, 341, 578, 1257
SspMI CTAG 4 cut(s) 278, 875, 1038, 1154
StyD4I CCNGG 6 cut(s) 240, 660, 714, 721, 783, 998
StyI CCWWGG 4 cut(s) 229, 448, 586, 1315
TaaI ACNGT 4 cut(s) 917, 1024, 1073, 1285
TaiI ACGT 3 cut(s) 513, 1168, 1251
TaqI TCGA 6 cut(s) 5, 534, 562, 748, 1030, 1224
TaqII GACCGA 1 cut(s) 278
TatI WGTACW 2 cut(s) 765, 1098
TauI GCSGC 1 cut(s) 122
TfiI GAWTC 5 cut(s) 382, 401, 463, 536, 843
Tru1I TTAA 3 cut(s) 150, 206, 513
Tru9I TTAA 3 cut(s) 150, 206, 513
TscAI CASTG 3 cut(s) 861, 920, 993
TseFI GTSAC 1 cut(s) 917
TseI GCWGC 4 cut(s) 42, 109, 182, 1117
Tsp45I GTSAC 1 cut(s) 917
TspDTI ATGAA 9 cut(s) 84, 162, 369, 374, 411, 452, 467, 903, 1176
TspRI CASTG 3 cut(s) 861, 920, 993
VpaK11BI GGWCC 2 cut(s) 426, 1150
XagI CCTNNNNNAGG 1 cut(s) 585
XapI RAATTY 2 cut(s) 267, 356
XceI RCATGY 1 cut(s) 205
XmiI GTMKAC 3 cut(s) 5, 1251, 1280
XmnI GAANNNNTTC 1 cut(s) 400
XspI CTAG 4 cut(s) 278, 875, 1038, 1154
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.