RLG00000030803

Callose synthase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
67781033 .. 67785299
4267 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000030803

Sequence Viewer

Length: 1332 bp
ATGGCATATAGAAGGGGCTTCGACCAGCAGCAACCGCAGAGGCGGATTCTGCGGACTCAGACTGCCGGAAGTTTTGGAGAGCCGTTGGATAGTGAGGTTGTGCCTTCTTCTCTGGTTGATATTGTTCCTATTCTCCGTGTTGCAAATGAAGTTGAATCTAGGAATGCAAGGGTTGCCTATCTCTGTCGCTTCTTTGCATTTTGGAAAGTTGACAGACTAGATCCAGCATCTAGTGGCCGTGGTGTTCGCCAGTTTAAAACCGCATTTCTTCAACGTCTAGAGAGGGAAAATGAAACAACATTGGCAGGACGAGCAGAGAGTGATGCTCGTGAAATGCAGAGTTTATATCAAGATTACTACCAAAAATACATTCAAGCTTTGCACAGTACTGCTGATAAACCTGATCGTGCACAACTGACAAAGGCATACAAAACTGCTGCTGTTTTGTATGAGGTTTTGATGGCTGTCAATCGGACAGAGTGTGTTGAAGTCGCTGGAAAGTTTTTGGAAGCCCACACTAAGGTTGAAGAAAAACAACAGATATATCTACCTTACAATATTCTTCCTCTTGATCCTGATAGTCATCAGTCAATCATGAGATGTCCCGAGACTCATGCTACTGTTTCTGCACTCCGAAACACCAGAGGTTTACCCTGGTCGAAGGACTACAAAAAGAAAGAAGATGCAGACATTTTTGATTGGCTTCATGCTATGTTTGGTTTTCAGAAGGATAATATCGCCAATCAAAGGGAGCACTTGATTCTTTTGATCGCTAGTGTTCACATATGGCAATTACCAAAATCTGATCAGCAGCCCAAGGAGGCTGAAAGGAGCAAAGGAGGAAAATCAAAGCATTCTCAATGGAGAAATTATGATGACTTGAATGAATACTTTCGGTCAGTTGATTGTTTTAAGCTAGGCTGGCCTATGCGTGCTGATGCTGATTTCTTTTACCAGCCTAGTAAAGAGCTTGAAGTTGACAAAGAGACTTCGACGGGGAGACCTCGACCTCAACGGCAGGATGGAGGAGGCAGCGGCAGGTGTGACGGGGAAGCGCCGGCTAGAGAGAAGGAGGAAGCGTTGAAGTCCAAGCGCACGCGCCATGCACTTTTGCTGGCCCTTGGAAGGCTGGAAGAGGAGAAACTAGGACCGACTTGGTCTCTAGAGCGGCTTTTGAAAGACCTGTGCATGTTGGGCAAGAAGAAGACTCCAGGCCAGCCTCGAGGTCTTAGACGTTGTGGCAGGCTATTTGTGGGAATTGGCAAGCAATCGTACAACATTTGTGTTCTTAGGCGAAAGCTTGGTTGTTCTTCAGATGGTGTCTCTTCTTAA
Functional Annotation

Protein Analysis

444

Amino Acids

50.77

Weight (kDa)

9.25

Isoelectric Point (pI)

47.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Vta1 PF04652 41 - 167 2.1e-12 Vta1 like
FKS1_dom1 PF14288 273 - 309 8.5e-08 1,3-beta-glucan synthase subunit FKS1, domain-1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1029
AbsI CCTCGAGG 1 cut(s) 1221
Acc36I ACCTGC 1 cut(s) 1029
AccBSI CCGCTC 1 cut(s) 1168
AccII CGCG 1 cut(s) 1099
AciI CCGC 6 cut(s) 35, 43, 52, 261, 1035, 1168
AclWI GGATC 2 cut(s) 215, 566
AcoI YGGCCR 1 cut(s) 235
AcuI CTGAAG 1 cut(s) 1296
AfaI GTAC 2 cut(s) 388, 1274
AfiI CCNNNNNNNGG 3 cut(s) 520, 747, 1125
AgsI TTSAA 9 cut(s) 155, 272, 374, 488, 527, 883, 974, 1084, 1177
AjnI CCWGG 2 cut(s) 653, 1210
AjuI GAANNNNNNNTTGG 2 cut(s) 354, 386
AluBI AGCT 4 cut(s) 377, 916, 970, 1300
AluI AGCT 4 cut(s) 377, 916, 970, 1300
Alw21I GWGCWC 2 cut(s) 412, 756
Alw26I GTCTC 5 cut(s) 602, 980, 994, 1164, 1327
Alw44I GTGCAC 1 cut(s) 408
AlwI GGATC 2 cut(s) 215, 566
Ama87I CYCGRG 2 cut(s) 605, 1221
AoxI GGCC 4 cut(s) 235, 923, 1116, 1213
ApaLI GTGCAC 1 cut(s) 408
ApeKI GCWGC 4 cut(s) 28, 437, 811, 1032
Asp700I GAANNNNTTC 1 cut(s) 891
AspLEI GCGC 3 cut(s) 1057, 1095, 1101
AspS9I GGNCC 2 cut(s) 1117, 1148
AvaI CYCGRG 2 cut(s) 605, 1221
AvaII GGWCC 1 cut(s) 1148
BaeGI GKGCMC 1 cut(s) 412
BauI CACGAG 1 cut(s) 327
BbsI GAAGAC 1 cut(s) 1211
Bbv12I GWGCWC 2 cut(s) 412, 756
BbvI GCAGC 4 cut(s) 40, 424, 823, 1044
BccI CCATC 3 cut(s) 454, 1016, 1310
BceAI ACGGC 3 cut(s) 67, 222, 1031
BcgI CGANNNNNNTGC 2 cut(s) 596, 630
BciT130I CCWGG 2 cut(s) 655, 1212
BclI TGATCA 1 cut(s) 805
BcoDI GTCTC 5 cut(s) 602, 980, 994, 1164, 1327
BfoI RGCGCY 1 cut(s) 1058
BfuAI ACCTGC 1 cut(s) 1029
BisI GCNGC 6 cut(s) 29, 438, 812, 1033, 1036, 1169
BlsI GCNGC 6 cut(s) 30, 439, 813, 1034, 1037, 1170
BmcAI AGTACT 1 cut(s) 388
Bme1390I CCNGG 2 cut(s) 655, 1212
Bme18I GGWCC 1 cut(s) 1148
BmeT110I CYCGRG 2 cut(s) 605, 1221
BmgT120I GGNCC 2 cut(s) 1117, 1148
BmrFI CCNGG 2 cut(s) 655, 1212
BmsI GCATC 4 cut(s) 236, 313, 673, 928
BpiI GAAGAC 1 cut(s) 1211
BplI GAGNNNNNCTC 2 cut(s) 310, 342
BpmI CTGGAG 1 cut(s) 1194
BsaBI GATNNNNATC 1 cut(s) 582
BsaI GGTCTC 2 cut(s) 994, 1164
BsaJI CCNNGG 4 cut(s) 238, 653, 816, 1120
BsaXI ACNNNNNCTCC 2 cut(s) 1064, 1094
Bsc4I CCNNNNNNNGG 3 cut(s) 520, 747, 1125
Bse118I RCCGGY 1 cut(s) 1057
Bse1I ACTGG 1 cut(s) 250
Bse8I GATNNNNATC 1 cut(s) 582
BseBI CCWGG 2 cut(s) 655, 1212
BseDI CCNNGG 4 cut(s) 238, 653, 816, 1120
BseGI GGATG 1 cut(s) 1027
BseJI GATNNNNATC 1 cut(s) 582
BseLI CCNNNNNNNGG 3 cut(s) 520, 747, 1125
BseMII CTCAG 1 cut(s) 71
BseNI ACTGG 1 cut(s) 250
BseRI GAGGAG 2 cut(s) 1041, 1151
BseSI GKGCMC 1 cut(s) 412
BseXI GCAGC 4 cut(s) 40, 424, 823, 1044
BsgI GTGCAG 1 cut(s) 612
Bsh1236I CGCG 1 cut(s) 1099
BshFI GGCC 4 cut(s) 237, 925, 1118, 1215
BsiHKAI GWGCWC 2 cut(s) 412, 756
BsiHKCI CYCGRG 2 cut(s) 605, 1221
BsiSI CCGG 2 cut(s) 66, 1058
BslFI GGGAC 1 cut(s) 588
BslI CCNNNNNNNGG 3 cut(s) 520, 747, 1125
BsmAI GTCTC 5 cut(s) 602, 980, 994, 1164, 1327
BsmFI GGGAC 1 cut(s) 588
BsmI GAATGC 2 cut(s) 169, 853
BsnI GGCC 4 cut(s) 237, 925, 1118, 1215
Bso31I GGTCTC 2 cut(s) 994, 1164
BsoBI CYCGRG 2 cut(s) 605, 1221
Bsp1286I GDGCHC 2 cut(s) 412, 756
Bsp143I GATC 5 cut(s) 220, 403, 571, 768, 805
BspACI CCGC 6 cut(s) 35, 43, 52, 261, 1035, 1168
BspANI GGCC 4 cut(s) 237, 925, 1118, 1215
BspCNI CTCAG 1 cut(s) 70
BspFNI CGCG 1 cut(s) 1099
BspHI TCATGA 1 cut(s) 594
BspMI ACCTGC 1 cut(s) 1029
BspPI GGATC 2 cut(s) 215, 566
BspTNI GGTCTC 2 cut(s) 994, 1164
BsrBI CCGCTC 1 cut(s) 1168
BsrFI RCCGGY 1 cut(s) 1057
BsrI ACTGG 1 cut(s) 250
BssAI RCCGGY 1 cut(s) 1057
BssECI CCNNGG 4 cut(s) 238, 653, 816, 1120
BssMI GATC 5 cut(s) 220, 403, 571, 768, 805
BssSI CACGAG 1 cut(s) 327
BssT1I CCWWGG 2 cut(s) 816, 1120
Bst2BI CACGAG 1 cut(s) 327
Bst2UI CCWGG 2 cut(s) 655, 1212
Bst4CI ACNGT 2 cut(s) 386, 622
Bst6I CTCTTC 1 cut(s) 1128
BstAPI GCANNNNNTGC 1 cut(s) 173
BstC8I GCNNGC 8 cut(s) 923, 933, 1059, 1097, 1116, 1217, 1244, 1265
BstDEI CTNAG 4 cut(s) 57, 519, 1229, 1289
BstDSI CCRYGG 1 cut(s) 238
BstF5I GGATG 1 cut(s) 1027
BstFNI CGCG 1 cut(s) 1099
BstH2I RGCGCY 1 cut(s) 1058
BstHHI GCGC 3 cut(s) 1057, 1095, 1101
BstKTI GATC 5 cut(s) 223, 406, 574, 771, 808
BstMAI GTCTC 5 cut(s) 602, 980, 994, 1164, 1327
BstMBI GATC 5 cut(s) 220, 403, 571, 768, 805
BstMWI GCNNNNNNNGC 6 cut(s) 34, 49, 173, 311, 922, 1194
BstNI CCWGG 2 cut(s) 655, 1212
BstNSI RCATGY 1 cut(s) 1192
BstSCI CCNGG 2 cut(s) 653, 1210
BstSLI GKGCMC 1 cut(s) 412
BstUI CGCG 1 cut(s) 1099
BstV1I GCAGC 4 cut(s) 40, 424, 823, 1044
BstV2I GAAGAC 1 cut(s) 1211
BstX2I RGATCY 1 cut(s) 220
BstYI RGATCY 1 cut(s) 220
BsuRI GGCC 4 cut(s) 237, 925, 1118, 1215
BtgI CCRYGG 1 cut(s) 238
BtsCI GGATG 1 cut(s) 1027
BveI ACCTGC 1 cut(s) 1029
Cac8I GCNNGC 8 cut(s) 923, 933, 1059, 1097, 1116, 1217, 1244, 1265
CciI TCATGA 1 cut(s) 594
CfoI GCGC 3 cut(s) 1057, 1095, 1101
Cfr10I RCCGGY 1 cut(s) 1057
Cfr13I GGNCC 2 cut(s) 1117, 1148
Csp6I GTAC 2 cut(s) 387, 1273
CviAII CATG 5 cut(s) 595, 614, 707, 1103, 1189
CviQI GTAC 2 cut(s) 387, 1273
DdeI CTNAG 4 cut(s) 57, 519, 1229, 1289
DpnI GATC 5 cut(s) 222, 405, 573, 770, 807
DpnII GATC 5 cut(s) 220, 403, 571, 768, 805
DraI TTTAAA 1 cut(s) 256
EaeI YGGCCR 1 cut(s) 235
Eam1104I CTCTTC 1 cut(s) 1128
EarI CTCTTC 1 cut(s) 1128
EciI GGCGGA 1 cut(s) 58
Eco130I CCWWGG 2 cut(s) 816, 1120
Eco31I GGTCTC 2 cut(s) 994, 1164
Eco47I GGWCC 1 cut(s) 1148
Eco57I CTGAAG 1 cut(s) 1296
Eco88I CYCGRG 2 cut(s) 605, 1221
EcoRII CCWGG 2 cut(s) 653, 1210
EcoT14I CCWWGG 2 cut(s) 816, 1120
ErhI CCWWGG 2 cut(s) 816, 1120
FaeI CATG 5 cut(s) 598, 617, 710, 1106, 1192
FaqI GGGAC 1 cut(s) 588
FatI CATG 5 cut(s) 594, 613, 706, 1102, 1188
FauNDI CATATG 1 cut(s) 785
FbaI TGATCA 1 cut(s) 805
Fnu4HI GCNGC 6 cut(s) 29, 438, 812, 1033, 1036, 1169
FokI GGATG 1 cut(s) 1034
Fsp4HI GCNGC 6 cut(s) 29, 438, 812, 1033, 1036, 1169
GlaI GCGC 3 cut(s) 1056, 1094, 1100
GluI GCNGC 6 cut(s) 29, 438, 812, 1033, 1036, 1169
GsuI CTGGAG 1 cut(s) 1194
HaeII RGCGCY 1 cut(s) 1058
HaeIII GGCC 4 cut(s) 237, 925, 1118, 1215
HapII CCGG 2 cut(s) 66, 1058
HhaI GCGC 3 cut(s) 1057, 1095, 1101
Hin1II CATG 5 cut(s) 598, 617, 710, 1106, 1192
Hin6I GCGC 3 cut(s) 1055, 1093, 1099
HinP1I GCGC 3 cut(s) 1055, 1093, 1099
HincII GTYRAC 2 cut(s) 211, 979
HindII GTYRAC 2 cut(s) 211, 979
HindIII AAGCTT 2 cut(s) 375, 1298
HinfI GANTC 6 cut(s) 46, 55, 155, 610, 760, 1207
HpaII CCGG 2 cut(s) 66, 1058
Hpy166II GTNNAC 5 cut(s) 211, 410, 650, 781, 979
Hpy188I TCNGA 6 cut(s) 60, 474, 635, 726, 805, 1315
Hpy188III TCNNGA 8 cut(s) 278, 329, 350, 569, 575, 595, 605, 1163
Hpy8I GTNNAC 5 cut(s) 211, 410, 650, 781, 979
Hpy99I CGWCG 1 cut(s) 997
HpyAV CCTTC 6 cut(s) 6, 114, 655, 721, 1063, 1119
HpyCH4III ACNGT 2 cut(s) 386, 622
HpyCH4IV ACGT 2 cut(s) 274, 1234
HpyF10VI GCNNNNNNNGC 6 cut(s) 34, 49, 173, 311, 922, 1194
HpyF3I CTNAG 4 cut(s) 57, 519, 1229, 1289
HpySE526I ACGT 2 cut(s) 274, 1234
Hsp92II CATG 5 cut(s) 598, 617, 710, 1106, 1192
HspAI GCGC 3 cut(s) 1055, 1093, 1099
KroI GCCGGC 1 cut(s) 1057
KroNI GCCGGC 1 cut(s) 1059
Ksp22I TGATCA 1 cut(s) 805
Kzo9I GATC 5 cut(s) 220, 403, 571, 768, 805
LmnI GCTCC 2 cut(s) 751, 831
Lsp1109I GCAGC 4 cut(s) 40, 424, 823, 1044
LweI GCATC 4 cut(s) 236, 313, 673, 928
MaeII ACGT 2 cut(s) 274, 1234
MaeIII GTNAC 1 cut(s) 1043
MalI GATC 5 cut(s) 222, 405, 573, 770, 807
MbiI CCGCTC 1 cut(s) 1168
MboI GATC 5 cut(s) 220, 403, 571, 768, 805
MflI RGATCY 1 cut(s) 220
MhlI GDGCHC 2 cut(s) 412, 756
MluCI AATT 3 cut(s) 791, 868, 1257
MlyI GAGTC 3 cut(s) 49, 604, 1201
MmeI TCCRAC 1 cut(s) 66
MroNI GCCGGC 1 cut(s) 1057
MroXI GAANNNNTTC 1 cut(s) 891
MseI TTAA 3 cut(s) 255, 912, 1330
MspA1I CMGCKG 1 cut(s) 1035
MspI CCGG 2 cut(s) 66, 1058
MspR9I CCNGG 2 cut(s) 655, 1212
Mva1269I GAATGC 2 cut(s) 169, 853
MvaI CCWGG 2 cut(s) 655, 1212
MvnI CGCG 1 cut(s) 1099
MwoI GCNNNNNNNGC 6 cut(s) 34, 49, 173, 311, 922, 1194
NaeI GCCGGC 1 cut(s) 1059
NdeI CATATG 1 cut(s) 785
NdeII GATC 5 cut(s) 220, 403, 571, 768, 805
NgoMIV GCCGGC 1 cut(s) 1057
NlaIII CATG 5 cut(s) 598, 617, 710, 1106, 1192
NmuCI GTSAC 1 cut(s) 1043
NspI RCATGY 1 cut(s) 1192
PaeR7I CTCGAG 1 cut(s) 1221
PagI TCATGA 1 cut(s) 594
PaqCI CACCTGC 1 cut(s) 1029
PctI GAATGC 2 cut(s) 169, 853
PdiI GCCGGC 1 cut(s) 1059
PdmI GAANNNNTTC 1 cut(s) 891
PfeI GAWTC 3 cut(s) 46, 155, 760
PflFI GACNNNGTC 1 cut(s) 1156
PkrI GCNGC 6 cut(s) 30, 439, 813, 1034, 1037, 1170
PleI GAGTC 3 cut(s) 49, 604, 1201
PpsI GAGTC 3 cut(s) 49, 604, 1201
Psp6I CCWGG 2 cut(s) 653, 1210
PspGI CCWGG 2 cut(s) 653, 1210
PspPI GGNCC 2 cut(s) 1117, 1148
PspXI VCTCGAGB 1 cut(s) 1221
PsuI RGATCY 1 cut(s) 220
PsyI GACNNNGTC 1 cut(s) 1156
RsaI GTAC 2 cut(s) 388, 1274
RsaNI GTAC 2 cut(s) 387, 1273
SaqAI TTAA 3 cut(s) 255, 912, 1330
SatI GCNGC 6 cut(s) 29, 438, 812, 1033, 1036, 1169
Sau3AI GATC 5 cut(s) 220, 403, 571, 768, 805
Sau96I GGNCC 2 cut(s) 1117, 1148
ScaI AGTACT 1 cut(s) 388
SchI GAGTC 3 cut(s) 49, 604, 1201
ScrFI CCNGG 2 cut(s) 655, 1212
SduI GDGCHC 2 cut(s) 412, 756
SfaNI GCATC 4 cut(s) 236, 313, 673, 928
Sfr274I CTCGAG 1 cut(s) 1221
SinI GGWCC 1 cut(s) 1148
SlaI CTCGAG 1 cut(s) 1221
SmlI CTYRAG 1 cut(s) 1221
SmoI CTYRAG 1 cut(s) 1221
Sse9I AATT 3 cut(s) 791, 868, 1257
SsiI CCGC 6 cut(s) 35, 43, 52, 261, 1035, 1168
SspI AATATT 1 cut(s) 559
StyD4I CCNGG 2 cut(s) 653, 1210
StyI CCWWGG 2 cut(s) 816, 1120
TaaI ACNGT 2 cut(s) 386, 622
TaiI ACGT 2 cut(s) 277, 1237
TaqI TCGA 5 cut(s) 21, 659, 992, 1006, 1222
TaqII GACCGA 2 cut(s) 885, 1165
TasI AATT 3 cut(s) 791, 868, 1257
TatI WGTACW 1 cut(s) 386
TauI GCSGC 2 cut(s) 1038, 1171
TfiI GAWTC 3 cut(s) 46, 155, 760
Tru1I TTAA 3 cut(s) 255, 912, 1330
Tru9I TTAA 3 cut(s) 255, 912, 1330
TseFI GTSAC 1 cut(s) 1043
TseI GCWGC 4 cut(s) 28, 437, 811, 1032
Tsp45I GTSAC 1 cut(s) 1043
TspDTI ATGAA 4 cut(s) 162, 306, 695, 900
TspGWI ACGGA 1 cut(s) 125
Tth111I GACNNNGTC 1 cut(s) 1156
VneI GTGCAC 1 cut(s) 408
VpaK11BI GGWCC 1 cut(s) 1148
XbaI TCTAGA 2 cut(s) 277, 1162
XceI RCATGY 1 cut(s) 1192
XhoI CTCGAG 1 cut(s) 1221
XmnI GAANNNNTTC 1 cut(s) 891
ZrmI AGTACT 1 cut(s) 388
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.