Gene Detail - RorugPtG0004000

Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000008

Orthogroup ID

OG0002059

Physical Location & Seq

Genomic Coordinates Reverse (-)

88125 .. 88198

Gene Structure 74 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 22 bp

Sequence not available

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005911 GO:0009504 GO:0009506 GO:0016020 GO:0030054 GO:0044424 GO:0044444 GO:0044464 GO:0055044 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FKS1_dom1 Glucan_synthase Vta1

Genomic Context

Gene Family Tree

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Publication-ready

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Orthologous Genes (Group: OG0002059)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05570 AT1G05570 AT1G05570 AT1G05570 AT2G31960 AT2G31960 AT2G31960 AT2G31960 AT2G31960 AT3G32050 AT5G36870 AT5G36870 AT5G36870 AT5G36870 AT5G36870
fragaria_vesca	FvH4_7g00110 FvH4_7g00110
malus_domestica	MD02G1319100.v1.1 MD07G1001800.v1.1
prunus_persica	Prupe.2G003400_v2.0.a1 Prupe.2G003400_v2.0.a1 Prupe.2G003400_v2.0.a1 Prupe.2G003400_v2.0.a1
pyrus_communis	pycom02g26730 pycom07g00210
rosa_chinensis	RchiOBHm_Chr1g0313311 RchiOBHm_Chr1g0313331 RchiOBHm_Chr1g0313341
rosa_laevigata	RLG00000030802 RLG00000030803 RLG00000030805 RLG00000030806
rosa_multiflora	Rmu_co8187780.1_g000001 Rmu_sc0000035.1_g000021
rosa_roxburghii	Rroxscaffold_4G00332260
rosa_rugosa	RorugPtG0003800.1 RorugPtG0003900 RorugPtG0004000.1
rosa_samantha	Rh1AG002600 Rh1CG001700 Rh1CG007400 Rh1DG002500
rosa_wichuraiana	Rw1G000170 Rw1G000180

Restriction Enzyme Sites

1 / 10

No common restriction sites found or sequence not available.