RLG00000032273

Prolyl oligopeptidase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000957
Physical Location & Seq
Reverse (-)
12974407 .. 12975301
895 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000032273

Sequence Viewer

Length: 312 bp
ATGGAACTTTTTTACAATTCTACAGGTAAAGTGACTCGGTCACCAGCTCGATTATCCTCTGTGTATTCTGTGAAGTGCAGTTGTTGGTTTGATATCCACATGAACATTGATAAATTCCCTCTGGTGAAATATCCTGTGCTGGTAATACATGGTTATGTGAACAATTTGATGCAAGGGAGAAGTTACAGCAGTCAATGGAGGAGTTTGTGTAAATTGTTCAGCAGCATTGGGACCTCCGGGGTTCGAACCCAGCTTGGCTGGATACTCTTGATTGACTTATCCATCCCTGCTACGCTCGCTTATGGGTATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_1 Hydrolase_4 Peptidase_S9

Protein Analysis

104

Amino Acids

11.69

Weight (kDa)

9.47

Isoelectric Point (pI)

50.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 113
AluBI AGCT 2 cut(s) 47, 253
AluI AGCT 2 cut(s) 47, 253
ApeKI GCWGC 1 cut(s) 222
ApoI RAATTY 1 cut(s) 113
AspS9I GGNCC 1 cut(s) 231
AsuC2I CCSGG 1 cut(s) 238
AsuHPI GGTGA 2 cut(s) 33, 136
AsuII TTCGAA 1 cut(s) 244
AvaII GGWCC 1 cut(s) 231
BbvI GCAGC 1 cut(s) 234
BccI CCATC 1 cut(s) 290
BciVI GTATCC 1 cut(s) 255
BcnI CCSGG 1 cut(s) 238
BfmI CTRYAG 1 cut(s) 21
BfuI GTATCC 1 cut(s) 255
BisI GCNGC 1 cut(s) 223
BlsI GCNGC 1 cut(s) 224
Bme1390I CCNGG 1 cut(s) 238
Bme18I GGWCC 1 cut(s) 231
BmgT120I GGNCC 1 cut(s) 231
BmiI GGNNCC 1 cut(s) 232
BmrFI CCNGG 1 cut(s) 238
BmsI GCATC 1 cut(s) 159
Bpu14I TTCGAA 1 cut(s) 244
BpuMI CCSGG 1 cut(s) 238
BsaJI CCNNGG 1 cut(s) 237
BsaXI ACNNNNNCTCC 2 cut(s) 193, 223
BseDI CCNNGG 1 cut(s) 237
BseGI GGATG 1 cut(s) 282
BseRI GAGGAG 1 cut(s) 214
BseXI GCAGC 1 cut(s) 234
BseYI CCCAGC 1 cut(s) 249
BsgI GTGCAG 1 cut(s) 97
BsiSI CCGG 1 cut(s) 237
BslFI GGGAC 1 cut(s) 244
BsmFI GGGAC 1 cut(s) 244
Bsp119I TTCGAA 1 cut(s) 244
BspLI GGNNCC 1 cut(s) 232
BspT104I TTCGAA 1 cut(s) 244
BssECI CCNNGG 1 cut(s) 237
BstBI TTCGAA 1 cut(s) 244
BstC8I GCNNGC 1 cut(s) 297
BstEII GGTNACC 1 cut(s) 39
BstF5I GGATG 1 cut(s) 282
BstMWI GCNNNNNNNGC 1 cut(s) 296
BstPI GGTNACC 1 cut(s) 39
BstSCI CCNGG 1 cut(s) 236
BstSFI CTRYAG 1 cut(s) 21
BstV1I GCAGC 1 cut(s) 234
BsuI GTATCC 1 cut(s) 255
BtsCI GGATG 1 cut(s) 282
Cac8I GCNNGC 1 cut(s) 297
Cfr13I GGNCC 1 cut(s) 231
CviAII CATG 2 cut(s) 100, 149
CviJI RGCY 3 cut(s) 47, 253, 258
CviKI_1 RGCY 3 cut(s) 47, 253, 258
Eco32I GATATC 1 cut(s) 94
Eco47I GGWCC 1 cut(s) 231
Eco91I GGTNACC 1 cut(s) 39
EcoO109I RGGNCCY 1 cut(s) 231
EcoO65I GGTNACC 1 cut(s) 39
EcoRV GATATC 1 cut(s) 94
FaeI CATG 2 cut(s) 103, 152
FaiI YATR 4 cut(s) 101, 150, 156, 303
FaqI GGGAC 1 cut(s) 244
FatI CATG 2 cut(s) 99, 148
Fnu4HI GCNGC 1 cut(s) 223
FokI GGATG 1 cut(s) 269
Fsp4HI GCNGC 1 cut(s) 223
GluI GCNGC 1 cut(s) 223
GsaI CCCAGC 1 cut(s) 253
HapII CCGG 1 cut(s) 237
Hin1II CATG 2 cut(s) 103, 152
HinfI GANTC 1 cut(s) 34
HpaII CCGG 1 cut(s) 237
HphI GGTGA 2 cut(s) 33, 136
Hpy166II GTNNAC 1 cut(s) 160
Hpy188III TCNNGA 1 cut(s) 268
Hpy8I GTNNAC 1 cut(s) 160
HpyCH4V TGCA 2 cut(s) 78, 172
HpyF10VI GCNNNNNNNGC 1 cut(s) 296
Hsp92II CATG 2 cut(s) 103, 152
LpnPI CCDG 9 cut(s) 9, 57, 107, 125, 147, 244, 250, 263, 300
Lsp1109I GCAGC 1 cut(s) 234
LweI GCATC 1 cut(s) 159
MaeIII GTNAC 3 cut(s) 31, 39, 182
MluCI AATT 4 cut(s) 16, 113, 163, 212
MlyI GAGTC 1 cut(s) 28
MnlI CCTC 4 cut(s) 67, 129, 192, 244
MseI TTAA 1 cut(s) 310
MslI CAYNNNNRTG 1 cut(s) 153
MspI CCGG 1 cut(s) 237
MspR9I CCNGG 1 cut(s) 238
MwoI GCNNNNNNNGC 1 cut(s) 296
NciI CCSGG 1 cut(s) 238
NlaIII CATG 2 cut(s) 103, 152
NlaIV GGNNCC 1 cut(s) 232
NmuCI GTSAC 2 cut(s) 31, 39
NspV TTCGAA 1 cut(s) 244
PflFI GACNNNGTC 1 cut(s) 37
PkrI GCNGC 1 cut(s) 224
PleI GAGTC 1 cut(s) 28
PpsI GAGTC 1 cut(s) 28
PpuMI RGGWCCY 1 cut(s) 231
Psp5II RGGWCCY 1 cut(s) 231
PspEI GGTNACC 1 cut(s) 39
PspFI CCCAGC 1 cut(s) 249
PspN4I GGNNCC 1 cut(s) 232
PspPI GGNCC 1 cut(s) 231
PspPPI RGGWCCY 1 cut(s) 231
PsyI GACNNNGTC 1 cut(s) 37
RseI CAYNNNNRTG 1 cut(s) 153
SaqAI TTAA 1 cut(s) 310
SatI GCNGC 1 cut(s) 223
Sau96I GGNCC 1 cut(s) 231
SchI GAGTC 1 cut(s) 28
ScrFI CCNGG 1 cut(s) 238
SetI ASST 4 cut(s) 28, 49, 236, 255
SfaNI GCATC 1 cut(s) 159
SfcI CTRYAG 1 cut(s) 21
SfuI TTCGAA 1 cut(s) 244
SinI GGWCC 1 cut(s) 231
SmiMI CAYNNNNRTG 1 cut(s) 153
Sse9I AATT 4 cut(s) 16, 113, 163, 212
StyD4I CCNGG 1 cut(s) 236
TaqI TCGA 2 cut(s) 49, 244
TaqII GACCGA 1 cut(s) 27
TasI AATT 4 cut(s) 16, 113, 163, 212
Tru1I TTAA 1 cut(s) 310
Tru9I TTAA 1 cut(s) 310
TseFI GTSAC 2 cut(s) 31, 39
TseI GCWGC 1 cut(s) 222
Tsp45I GTSAC 2 cut(s) 31, 39
TspDTI ATGAA 1 cut(s) 116
Tth111I GACNNNGTC 1 cut(s) 37
VpaK11BI GGWCC 1 cut(s) 231
XapI RAATTY 1 cut(s) 113
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.