Rroxscaffold_7G00170410

cysteine--tRNA

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000957
Physical Location & Seq
Reverse (-)
10841818 .. 10845387
3570 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00170410.1

Sequence Viewer

Length: 1692 bp
ATGGGCACTCTGCTCAAGTGCTACAGACCCTTCTTCTCAACTCGGAACGCACCGTTTCAACTCGGAACGCACCGTTTCAACAACCCCAAAAGGAGAATCCGTTGCCTGAGTACTACCACCACTACTTCTTCAAGCCACTCCCAGCCGTCGATTGATGTCGCCACCAAATCGGAGAGTCCAGCGTCGTCGGAGCTCTGGCTGCACAACACAATGAGCAGGAAGAAGGAGCTCTTTAAGCCCAAAATTGAAGGCAAAGTCGGCATGTATGTCTGTGGAGTCACAGCTTACGATCTTAGCCATATTGGCCACGCTCGCGTCTACGTCACTTTCGATGTTCTCTACAGATATCTTAGGCATTTGGGCTATCAAGTCACTTATGTTCGAAATTTCACAGACGTTGATGACAAAATAATTGCTAGAGCAAATGAATTGGGAGAGGATCCAATCAGTTTGAGTAGACGTTACTGTGAGGAGTTCAATCGAGATATGGAGTATCTTCATTGCCTGCCTCCTTCTGTGGAACCGCGAGTGTCTGATCACATGCCACAGATCACTGATATGATTAAGCAGATTATTGAAAATGGACATGCCTATGGAGTTGATGGGGATGTGTATTTCAGTGTTGACAAGTTCCCAGATTATGGACGTCTATCTGGGCGAAAATTAGAAGATAATCGAGCCGGTGAGCGAGTCACTGTTGATTCAAGGAAGAAAAATCCTGCTGATTTTGCTTTATGGAAGTCTGCAAAGGAAGGTGAACCCTTCTGGGACAGTCCATGGGGCCCTGGAAGACCTGGTTGGCATATCGAGTGCAGTGCCATGAGTGCTGCTTATTTGGGTTACTCTTTTGACATACATGGTGGAGGGATGGACCTTGTGTTTCCCCACCATGAGAATGAAATTGCTCAGAGTTGTGCTGCATGTAAACAAAGTGATATAAGCTACTGGATACACAATGGTTTTGTCACTATAGACTCCGAGAAAATGTCGAAATCCCTAGGGAACTTCTTTACAATTCGGCAGGTTATAGACCTATACCATCCATTGGCTTTGCGACTTTTCTTATTAGGGACCCATTATCAGTCTCCAATCAACTACTCTGATGTGCAGCTTGAAAGCACTTCAGAGCGGATCTTCTACATATTTCAGACTTTATATGATTGTGAAAGTGTCTTAAGCCAGCATGATGTGCCAACCCTGAAGGATACCATTCCTCCTGAAATAGTGGAAAGCATCAATAAGTTCTACAATGTTTTTGTAACATCAATGTCGGATGATCTTCACAGTTCTGTTGTTTTTGGTGCATTATCAGACCCATTAAAAACTATGAATGATCTGCTACACACTCGCAAGGGCAAGAAGCAAACATTGAGGATAGAGTCTCTTGCAGCTTTGGAAAAGATTACCAGGAATGTTTTAAGCATTTTGGGATTACTGCCTGCAAGTTACGCTGAGATTCTGCAGCAGCTGAGAGAAAAAGCATTGAAGCGTGCAAAATTAACAGAAGATCAAGTATTGCAGAAAATTGAGGAAAGAACTGCAGCAAGGAAGAACAAAGAGTACGAAAAATCAGATACAATTCGAAAAAATTTAGCTGCTGTGGGAATCACTCTTATGGACAACCCAGATGGGACAACATGGAGACCAGCTGTACCTCTTGCAATTCAAGAGCAGCAGGTGGCATCTCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0000741 GO:0003674 GO:0003824 GO:0004812 GO:0004817 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006417 GO:0006418 GO:0006423 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0006996 GO:0006997 GO:0007005 GO:0007006 GO:0007007 GO:0007275 GO:0008144 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009532 GO:0009536 GO:0009553 GO:0009559 GO:0009561 GO:0009570 GO:0009889 GO:0009987 GO:0010197 GO:0010467 GO:0010468 GO:0010556 GO:0010608 GO:0010941 GO:0016043 GO:0016070 GO:0016874 GO:0016875 GO:0017076 GO:0019222 GO:0019538 GO:0019752 GO:0030154 GO:0030554 GO:0031323 GO:0031326 GO:0032268 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0034248 GO:0034641 GO:0034645 GO:0034660 GO:0035639 GO:0036094 GO:0042407 GO:0043038 GO:0043039 GO:0043043 GO:0043067 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048229 GO:0048284 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051246 GO:0060255 GO:0061024 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0097367 GO:0140098 GO:0140101 GO:1901265 GO:1901360 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:2000112
KEGG Pathways
Metabolic & Signaling
ko00970 map00970
Pfam Domains
Protein Families
DALR_2 tRNA-synt_1e tRNA-synt_1g

Protein Analysis

563

Amino Acids

64.04

Weight (kDa)

7.03

Isoelectric Point (pI)

53.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
tRNA-synt_1e PF01406 78 - 374 2.4e-130 tRNA synthetases class I (C) catalytic domain
tRNA-synt_1g PF09334 99 - 168 2.8e-06 tRNA synthetases class I (M)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1666
AatII GACGTC 1 cut(s) 649
Acc36I ACCTGC 2 cut(s) 1012, 1666
AccB7I CCANNNNNTGG 2 cut(s) 641, 1045
AccBSI CCGCTC 1 cut(s) 1129
AccI GTMKAC 2 cut(s) 318, 457
AccII CGCG 2 cut(s) 315, 526
AciI CCGC 2 cut(s) 524, 1129
AclWI GGATC 3 cut(s) 434, 447, 1139
AcoI YGGCCR 1 cut(s) 304
AcsI RAATTY 2 cut(s) 385, 1588
AcuI CTGAAG 2 cut(s) 1107, 1220
AcyI GRCGYC 1 cut(s) 646
AfaI GTAC 3 cut(s) 112, 1562, 1653
AfiI CCNNNNNNNGG 2 cut(s) 641, 1045
AflII CTTAAG 1 cut(s) 1174
AjnI CCWGG 3 cut(s) 784, 793, 1406
AjuI GAANNNNNNNTTGG 2 cut(s) 781, 813
AluBI AGCT 9 cut(s) 193, 229, 284, 942, 1111, 1391, 1468, 1595, 1649
AluI AGCT 9 cut(s) 193, 229, 284, 942, 1111, 1391, 1468, 1595, 1649
Alw21I GWGCWC 2 cut(s) 195, 231
Alw26I GTCTC 3 cut(s) 1089, 1386, 1636
AlwI GGATC 3 cut(s) 434, 447, 1139
AlwNI CAGNNNCTG 1 cut(s) 1468
AoxI GGCC 2 cut(s) 304, 781
ApaI GGGCCC 1 cut(s) 785
ApoI RAATTY 2 cut(s) 385, 1588
AspA2I CCTAGG 1 cut(s) 997
AspS9I GGNCC 4 cut(s) 781, 782, 871, 1071
AsuHPI GGTGA 2 cut(s) 695, 767
AsuII TTCGAA 2 cut(s) 382, 1582
AvaII GGWCC 2 cut(s) 871, 1071
AvrII CCTAGG 1 cut(s) 997
BaeGI GKGCMC 2 cut(s) 8, 785
BalI TGGCCA 1 cut(s) 306
BamHI GGATCC 1 cut(s) 439
BanII GRGCYC 3 cut(s) 195, 231, 785
BbsI GAAGAC 1 cut(s) 796
Bbv12I GWGCWC 2 cut(s) 195, 231
BccI CCATC 4 cut(s) 596, 862, 1047, 1622
BceAI ACGGC 1 cut(s) 130
BcgI CGANNNNNNTGC 2 cut(s) 797, 831
BciT130I CCWGG 3 cut(s) 786, 795, 1408
BciVI GTATCC 2 cut(s) 942, 1198
BclI TGATCA 1 cut(s) 535
BcoDI GTCTC 3 cut(s) 1089, 1386, 1636
BfaI CTAG 2 cut(s) 417, 998
BfmI CTRYAG 5 cut(s) 22, 340, 969, 1460, 1539
BfrI CTTAAG 1 cut(s) 1174
BfuAI ACCTGC 2 cut(s) 1012, 1666
BfuI GTATCC 2 cut(s) 942, 1198
BglI GCCNNNNNGGC 1 cut(s) 303
BlnI CCTAGG 1 cut(s) 997
BmcAI AGTACT 1 cut(s) 112
Bme1390I CCNGG 3 cut(s) 786, 795, 1408
Bme18I GGWCC 2 cut(s) 871, 1071
BmgT120I GGNCC 4 cut(s) 781, 782, 871, 1071
BmiI GGNNCC 6 cut(s) 441, 522, 782, 783, 1072, 1073
BmrFI CCNGG 3 cut(s) 786, 795, 1408
BmsI GCATC 1 cut(s) 1242
BpiI GAAGAC 1 cut(s) 796
Bpu14I TTCGAA 2 cut(s) 382, 1582
BsaHI GRCGYC 1 cut(s) 646
BsaI GGTCTC 1 cut(s) 1636
BsaJI CCNNGG 3 cut(s) 776, 784, 997
BsaXI ACNNNNNCTCC 4 cut(s) 85, 115, 1198, 1228
Bsc4I CCNNNNNNNGG 2 cut(s) 641, 1045
Bse118I RCCGGY 1 cut(s) 680
Bse1I ACTGG 1 cut(s) 950
Bse3DI GCAATG 1 cut(s) 499
BseBI CCWGG 3 cut(s) 786, 795, 1408
BseDI CCNNGG 3 cut(s) 776, 784, 997
BseGI GGATG 4 cut(s) 613, 873, 1039, 1279
BseLI CCNNNNNNNGG 2 cut(s) 641, 1045
BseMI GCAATG 1 cut(s) 499
BseMII CTCAG 4 cut(s) 98, 920, 1443, 1460
BseNI ACTGG 1 cut(s) 950
BseRI GAGGAG 1 cut(s) 485
BseSI GKGCMC 2 cut(s) 8, 785
BseYI CCCAGC 1 cut(s) 141
BsgI GTGCAG 3 cut(s) 185, 832, 1127
Bsh1236I CGCG 2 cut(s) 315, 526
BshFI GGCC 2 cut(s) 306, 783
BsiHKAI GWGCWC 2 cut(s) 195, 231
BsiSI CCGG 1 cut(s) 681
BslFI GGGAC 3 cut(s) 782, 1084, 1645
BslI CCNNNNNNNGG 2 cut(s) 641, 1045
BsmAI GTCTC 3 cut(s) 1089, 1386, 1636
BsmFI GGGAC 3 cut(s) 782, 1084, 1645
BsnI GGCC 2 cut(s) 306, 783
Bso31I GGTCTC 1 cut(s) 1636
Bsp119I TTCGAA 2 cut(s) 382, 1582
Bsp120I GGGCCC 1 cut(s) 781
Bsp1286I GDGCHC 4 cut(s) 8, 195, 231, 785
Bsp143I GATC 8 cut(s) 289, 439, 535, 549, 1131, 1276, 1333, 1507
Bsp19I CCATGG 1 cut(s) 776
BspACI CCGC 2 cut(s) 524, 1129
BspANI GGCC 2 cut(s) 306, 783
BspCNI CTCAG 4 cut(s) 99, 919, 1444, 1461
BspFNI CGCG 2 cut(s) 315, 526
BspLI GGNNCC 6 cut(s) 441, 522, 782, 783, 1072, 1073
BspMAI CTGCAG 2 cut(s) 1464, 1543
BspMI ACCTGC 2 cut(s) 1012, 1666
BspPI GGATC 3 cut(s) 434, 447, 1139
BspT104I TTCGAA 2 cut(s) 382, 1582
BspTI CTTAAG 1 cut(s) 1174
BspTNI GGTCTC 1 cut(s) 1636
BsrBI CCGCTC 1 cut(s) 1129
BsrDI GCAATG 1 cut(s) 499
BsrFI RCCGGY 1 cut(s) 680
BsrI ACTGG 1 cut(s) 950
BssAI RCCGGY 1 cut(s) 680
BssECI CCNNGG 3 cut(s) 776, 784, 997
BssMI GATC 8 cut(s) 289, 439, 535, 549, 1131, 1276, 1333, 1507
BssNI GRCGYC 1 cut(s) 646
BssT1I CCWWGG 2 cut(s) 776, 997
Bst2UI CCWGG 3 cut(s) 786, 795, 1408
Bst4CI ACNGT 6 cut(s) 54, 74, 467, 697, 773, 1286
BstACI GRCGYC 1 cut(s) 646
BstAFI CTTAAG 1 cut(s) 1174
BstAPI GCANNNNNTGC 1 cut(s) 1189
BstBI TTCGAA 2 cut(s) 382, 1582
BstC8I GCNNGC 5 cut(s) 313, 506, 1181, 1440, 1491
BstDEI CTNAG 6 cut(s) 107, 293, 350, 906, 1452, 1469
BstDSI CCRYGG 1 cut(s) 776
BstF5I GGATG 4 cut(s) 613, 873, 1039, 1279
BstFNI CGCG 2 cut(s) 315, 526
BstKTI GATC 8 cut(s) 292, 442, 538, 552, 1134, 1279, 1336, 1510
BstMAI GTCTC 3 cut(s) 1089, 1386, 1636
BstMBI GATC 8 cut(s) 289, 439, 535, 549, 1131, 1276, 1333, 1507
BstMWI GCNNNNNNNGC 9 cut(s) 199, 235, 258, 303, 312, 728, 824, 1189, 1448
BstNI CCWGG 3 cut(s) 786, 795, 1408
BstNSI RCATGY 4 cut(s) 265, 544, 590, 924
BstSCI CCNGG 3 cut(s) 784, 793, 1406
BstSFI CTRYAG 5 cut(s) 22, 340, 969, 1460, 1539
BstSLI GKGCMC 2 cut(s) 8, 785
BstUI CGCG 2 cut(s) 315, 526
BstV2I GAAGAC 1 cut(s) 796
BstX2I RGATCY 2 cut(s) 439, 1131
BstYI RGATCY 2 cut(s) 439, 1131
BsuI GTATCC 2 cut(s) 942, 1198
BsuRI GGCC 2 cut(s) 306, 783
BtgI CCRYGG 1 cut(s) 776
BtsCI GGATG 4 cut(s) 613, 873, 1039, 1279
BtsI GCAGTG 1 cut(s) 820
BtsIMutI CAGTG 4 cut(s) 552, 625, 693, 820
BveI ACCTGC 2 cut(s) 1012, 1666
Cac8I GCNNGC 5 cut(s) 313, 506, 1181, 1440, 1491
CaiI CAGNNNCTG 1 cut(s) 1468
Cfr10I RCCGGY 1 cut(s) 680
Cfr13I GGNCC 4 cut(s) 781, 782, 871, 1071
CseI GACGC 2 cut(s) 171, 304
CsiI ACCWGGT 1 cut(s) 793
Csp6I GTAC 3 cut(s) 111, 1561, 1652
CviQI GTAC 3 cut(s) 111, 1561, 1652
DdeI CTNAG 6 cut(s) 107, 293, 350, 906, 1452, 1469
DpnI GATC 8 cut(s) 291, 441, 537, 551, 1133, 1278, 1335, 1509
DpnII GATC 8 cut(s) 289, 439, 535, 549, 1131, 1276, 1333, 1507
EaeI YGGCCR 1 cut(s) 304
Ecl136II GAGCTC 2 cut(s) 193, 229
Eco130I CCWWGG 2 cut(s) 776, 997
Eco24I GRGCYC 3 cut(s) 195, 231, 785
Eco31I GGTCTC 1 cut(s) 1636
Eco32I GATATC 1 cut(s) 347
Eco47I GGWCC 2 cut(s) 871, 1071
Eco53kI GAGCTC 2 cut(s) 193, 229
Eco57I CTGAAG 2 cut(s) 1107, 1220
EcoICRI GAGCTC 2 cut(s) 193, 229
EcoO109I RGGNCCY 3 cut(s) 781, 782, 1071
EcoRII CCWGG 3 cut(s) 784, 793, 1406
EcoRV GATATC 1 cut(s) 347
EcoT14I CCWWGG 2 cut(s) 776, 997
EcoT38I GRGCYC 3 cut(s) 195, 231, 785
ErhI CCWWGG 2 cut(s) 776, 997
FalI AAGNNNNNCTT 2 cut(s) 215, 247
FaqI GGGAC 3 cut(s) 782, 1084, 1645
FbaI TGATCA 1 cut(s) 535
FblI GTMKAC 2 cut(s) 318, 457
FokI GGATG 4 cut(s) 620, 880, 1026, 1286
FriOI GRGCYC 3 cut(s) 195, 231, 785
FspBI CTAG 2 cut(s) 417, 998
GsaI CCCAGC 1 cut(s) 145
HaeIII GGCC 2 cut(s) 306, 783
HapII CCGG 1 cut(s) 681
HgaI GACGC 2 cut(s) 171, 304
Hin1I GRCGYC 1 cut(s) 646
HincII GTYRAC 1 cut(s) 625
HindII GTYRAC 1 cut(s) 625
HinfI GANTC 9 cut(s) 96, 175, 276, 690, 701, 974, 1379, 1456, 1605
HpaII CCGG 1 cut(s) 681
HphI GGTGA 2 cut(s) 695, 767
Hpy166II GTNNAC 5 cut(s) 319, 458, 625, 758, 926
Hpy188III TCNNGA 3 cut(s) 482, 1217, 1667
Hpy8I GTNNAC 5 cut(s) 319, 458, 625, 758, 926
Hpy99I CGWCG 3 cut(s) 151, 187, 190
HpyAV CCTTC 7 cut(s) 40, 217, 242, 522, 746, 772, 1195
HpyCH4III ACNGT 6 cut(s) 54, 74, 467, 697, 773, 1286
HpyCH4IV ACGT 4 cut(s) 321, 396, 460, 646
HpyF10VI GCNNNNNNNGC 9 cut(s) 199, 235, 258, 303, 312, 728, 824, 1189, 1448
HpyF3I CTNAG 6 cut(s) 107, 293, 350, 906, 1452, 1469
HpySE526I ACGT 4 cut(s) 321, 396, 460, 646
Hsp92I GRCGYC 1 cut(s) 646
KflI GGGWCCC 1 cut(s) 1071
Ksp22I TGATCA 1 cut(s) 535
Kzo9I GATC 8 cut(s) 289, 439, 535, 549, 1131, 1276, 1333, 1507
LmnI GCTCC 2 cut(s) 190, 226
LweI GCATC 1 cut(s) 1242
MabI ACCWGGT 1 cut(s) 793
MaeI CTAG 2 cut(s) 417, 998
MaeII ACGT 4 cut(s) 321, 396, 460, 646
MaeIII GTNAC 9 cut(s) 277, 322, 370, 461, 691, 839, 964, 1258, 1445
MalI GATC 8 cut(s) 291, 441, 537, 551, 1133, 1278, 1335, 1509
MbiI CCGCTC 1 cut(s) 1129
MboI GATC 8 cut(s) 289, 439, 535, 549, 1131, 1276, 1333, 1507
MflI RGATCY 2 cut(s) 439, 1131
MhlI GDGCHC 4 cut(s) 8, 195, 231, 785
MlsI TGGCCA 1 cut(s) 306
MluNI TGGCCA 1 cut(s) 306
MlyI GAGTC 5 cut(s) 184, 285, 699, 968, 1388
MmeI TCCRAC 2 cut(s) 168, 1251
MnlI CCTC 8 cut(s) 430, 463, 519, 857, 1224, 1365, 1522, 1665
Mox20I TGGCCA 1 cut(s) 306
MscI TGGCCA 1 cut(s) 306
MseI TTAA 6 cut(s) 234, 564, 1175, 1319, 1418, 1499
MslI CAYNNNNRTG 4 cut(s) 557, 591, 894, 1613
Msp20I TGGCCA 1 cut(s) 306
MspA1I CMGCKG 2 cut(s) 1468, 1649
MspCI CTTAAG 1 cut(s) 1174
MspI CCGG 1 cut(s) 681
MspR9I CCNGG 3 cut(s) 786, 795, 1408
MvaI CCWGG 3 cut(s) 786, 795, 1408
MvnI CGCG 2 cut(s) 315, 526
MwoI GCNNNNNNNGC 9 cut(s) 199, 235, 258, 303, 312, 728, 824, 1189, 1448
NcoI CCATGG 1 cut(s) 776
NdeII GATC 8 cut(s) 289, 439, 535, 549, 1131, 1276, 1333, 1507
NlaIV GGNNCC 6 cut(s) 441, 522, 782, 783, 1072, 1073
NmuCI GTSAC 5 cut(s) 277, 322, 370, 691, 964
NspI RCATGY 4 cut(s) 265, 544, 590, 924
NspV TTCGAA 2 cut(s) 382, 1582
PaqCI CACCTGC 1 cut(s) 1666
PcsI WCGNNNNNNNCGW 1 cut(s) 327
PfeI GAWTC 4 cut(s) 96, 701, 1456, 1605
PflMI CCANNNNNTGG 2 cut(s) 641, 1045
PleI GAGTC 5 cut(s) 183, 284, 698, 968, 1387
PpsI GAGTC 5 cut(s) 183, 284, 698, 968, 1387
PpuMI RGGWCCY 1 cut(s) 1071
Psp124BI GAGCTC 2 cut(s) 195, 231
Psp5II RGGWCCY 1 cut(s) 1071
Psp6I CCWGG 3 cut(s) 784, 793, 1406
PspFI CCCAGC 1 cut(s) 141
PspGI CCWGG 3 cut(s) 784, 793, 1406
PspN4I GGNNCC 6 cut(s) 441, 522, 782, 783, 1072, 1073
PspOMI GGGCCC 1 cut(s) 781
PspPI GGNCC 4 cut(s) 781, 782, 871, 1071
PspPPI RGGWCCY 1 cut(s) 1071
PsrI GAACNNNNNNTAC 2 cut(s) 1544, 1576
PstI CTGCAG 2 cut(s) 1464, 1543
PstNI CAGNNNCTG 1 cut(s) 1468
PsuI RGATCY 2 cut(s) 439, 1131
PvuII CAGCTG 2 cut(s) 1468, 1649
RsaI GTAC 3 cut(s) 112, 1562, 1653
RsaNI GTAC 3 cut(s) 111, 1561, 1652
RseI CAYNNNNRTG 4 cut(s) 557, 591, 894, 1613
SacI GAGCTC 2 cut(s) 195, 231
SaqAI TTAA 6 cut(s) 234, 564, 1175, 1319, 1418, 1499
Sau3AI GATC 8 cut(s) 289, 439, 535, 549, 1131, 1276, 1333, 1507
Sau96I GGNCC 4 cut(s) 781, 782, 871, 1071
ScaI AGTACT 1 cut(s) 112
SchI GAGTC 5 cut(s) 184, 285, 699, 968, 1388
ScrFI CCNGG 3 cut(s) 786, 795, 1408
SduI GDGCHC 4 cut(s) 8, 195, 231, 785
SexAI ACCWGGT 1 cut(s) 793
SfaNI GCATC 1 cut(s) 1242
SfcI CTRYAG 5 cut(s) 22, 340, 969, 1460, 1539
SfuI TTCGAA 2 cut(s) 382, 1582
SinI GGWCC 2 cut(s) 871, 1071
SmiMI CAYNNNNRTG 4 cut(s) 557, 591, 894, 1613
SmlI CTYRAG 2 cut(s) 14, 1174
SmoI CTYRAG 2 cut(s) 14, 1174
SsiI CCGC 2 cut(s) 524, 1129
SspMI CTAG 2 cut(s) 417, 998
SstI GAGCTC 2 cut(s) 195, 231
StyD4I CCNGG 3 cut(s) 784, 793, 1406
StyI CCWWGG 2 cut(s) 776, 997
TaaI ACNGT 6 cut(s) 54, 74, 467, 697, 773, 1286
TaiI ACGT 4 cut(s) 324, 399, 463, 649
TaqI TCGA 8 cut(s) 149, 330, 382, 481, 676, 807, 989, 1582
TatI WGTACW 1 cut(s) 110
TfiI GAWTC 4 cut(s) 96, 701, 1456, 1605
Tru1I TTAA 6 cut(s) 234, 564, 1175, 1319, 1418, 1499
Tru9I TTAA 6 cut(s) 234, 564, 1175, 1319, 1418, 1499
TscAI CASTG 4 cut(s) 559, 625, 700, 820
TseFI GTSAC 5 cut(s) 277, 322, 370, 691, 964
Tsp45I GTSAC 5 cut(s) 277, 322, 370, 691, 964
TspDTI ATGAA 4 cut(s) 441, 488, 912, 1343
TspGWI ACGGA 1 cut(s) 89
TspRI CASTG 4 cut(s) 559, 625, 700, 820
Van91I CCANNNNNTGG 2 cut(s) 641, 1045
Vha464I CTTAAG 1 cut(s) 1174
VpaK11BI GGWCC 2 cut(s) 871, 1071
XapI RAATTY 2 cut(s) 385, 1588
XceI RCATGY 4 cut(s) 265, 544, 590, 924
XmaJI CCTAGG 1 cut(s) 997
XmiI GTMKAC 2 cut(s) 318, 457
XspI CTAG 2 cut(s) 417, 998
ZraI GACGTC 1 cut(s) 647
ZrmI AGTACT 1 cut(s) 112
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.