Rh1DG055500

Alpha beta hydrolase domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
Physical Location & Seq
Reverse (-)
8882299 .. 8882884
586 bp
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UTR
Exon/CDS
Intron
Rh1DG055500.1

Sequence Viewer

Length: 243 bp
ATGGAACTTCTTTACAATTCGACAGGTAAAGTGACTCGGTCACCAGCTCGATTATCCTCTATGTATTTTGTGAAGTGCAGTTGTTGGTTTGATATCCACATGAACATTGATAAATTCCCTCTGGTGAAATATCCTGTGCTGGTAATACATGGTTATGTGAACAATTTGATGCAAGGGAGAAGTTACAGCAGTCAATGGAGGATTGTTCAGCATCATTGGGAGTATTCAATGTCTAGTAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

80

Amino Acids

9.51

Weight (kDa)

9.3

Isoelectric Point (pI)

59.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 113
AgsI TTSAA 1 cut(s) 228
AluBI AGCT 1 cut(s) 47
AluI AGCT 1 cut(s) 47
ApoI RAATTY 1 cut(s) 113
AsuHPI GGTGA 2 cut(s) 33, 136
BfaI CTAG 1 cut(s) 234
BmsI GCATC 2 cut(s) 159, 220
BsgI GTGCAG 1 cut(s) 97
BstEII GGTNACC 1 cut(s) 39
BstPI GGTNACC 1 cut(s) 39
CviAII CATG 2 cut(s) 100, 149
CviJI RGCY 1 cut(s) 47
CviKI_1 RGCY 1 cut(s) 47
Eco32I GATATC 1 cut(s) 94
Eco91I GGTNACC 1 cut(s) 39
EcoO65I GGTNACC 1 cut(s) 39
EcoRV GATATC 1 cut(s) 94
FaeI CATG 2 cut(s) 103, 152
FaiI YATR 4 cut(s) 62, 101, 150, 156
FatI CATG 2 cut(s) 99, 148
FspBI CTAG 1 cut(s) 234
Hin1II CATG 2 cut(s) 103, 152
HinfI GANTC 1 cut(s) 34
HphI GGTGA 2 cut(s) 33, 136
Hpy166II GTNNAC 1 cut(s) 160
Hpy8I GTNNAC 1 cut(s) 160
HpyCH4V TGCA 2 cut(s) 78, 172
Hsp92II CATG 2 cut(s) 103, 152
LpnPI CCDG 5 cut(s) 9, 57, 107, 125, 147
LweI GCATC 2 cut(s) 159, 220
MaeI CTAG 1 cut(s) 234
MaeIII GTNAC 3 cut(s) 31, 39, 182
MluCI AATT 4 cut(s) 16, 113, 163, 238
MlyI GAGTC 1 cut(s) 28
MnlI CCTC 3 cut(s) 67, 129, 192
MslI CAYNNNNRTG 1 cut(s) 153
NlaIII CATG 2 cut(s) 103, 152
NmuCI GTSAC 2 cut(s) 31, 39
PflFI GACNNNGTC 1 cut(s) 37
PleI GAGTC 1 cut(s) 28
PpsI GAGTC 1 cut(s) 28
PspEI GGTNACC 1 cut(s) 39
PsyI GACNNNGTC 1 cut(s) 37
RseI CAYNNNNRTG 1 cut(s) 153
SchI GAGTC 1 cut(s) 28
SetI ASST 2 cut(s) 28, 49
SfaNI GCATC 2 cut(s) 159, 220
SmiMI CAYNNNNRTG 1 cut(s) 153
Sse9I AATT 4 cut(s) 16, 113, 163, 238
SspMI CTAG 1 cut(s) 234
TaqI TCGA 2 cut(s) 20, 49
TaqII GACCGA 1 cut(s) 27
TasI AATT 4 cut(s) 16, 113, 163, 238
TseFI GTSAC 2 cut(s) 31, 39
Tsp45I GTSAC 2 cut(s) 31, 39
TspDTI ATGAA 1 cut(s) 116
Tth111I GACNNNGTC 1 cut(s) 37
XapI RAATTY 1 cut(s) 113
XspI CTAG 1 cut(s) 234
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.