domain-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| tRNA-synt_1e | PF01406 | 460 - 499 | 1.2e-08 | tRNA synthetases class I (C) catalytic domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1038 |
| AccII | CGCG | 1 cut(s) | 548 |
| AcuI | CTGAAG | 5 cut(s) | 119, 386, 518, 716, 914 |
| AfaI | GTAC | 6 cut(s) | 5, 29, 942, 980, 1028, 1318 |
| AgsI | TTSAA | 2 cut(s) | 580, 1419 |
| AjiI | CACGTC | 1 cut(s) | 1179 |
| AjnI | CCWGG | 2 cut(s) | 963, 1506 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1494, 1526 |
| Alw21I | GWGCWC | 5 cut(s) | 354, 486, 618, 684, 1077 |
| Alw26I | GTCTC | 3 cut(s) | 1181, 1198, 1253 |
| AoxI | GGCC | 1 cut(s) | 164 |
| ApeKI | GCWGC | 5 cut(s) | 1009, 1173, 1235, 1331, 1363 |
| AspLEI | GCGC | 2 cut(s) | 550, 748 |
| AspS9I | GGNCC | 2 cut(s) | 164, 1266 |
| AsuHPI | GGTGA | 2 cut(s) | 1409, 1481 |
| AvaII | GGWCC | 1 cut(s) | 1266 |
| BaeGI | GKGCMC | 1 cut(s) | 1498 |
| BanII | GRGCYC | 5 cut(s) | 354, 486, 618, 684, 1077 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1300, 1332 |
| BbsI | GAAGAC | 3 cut(s) | 59, 125, 1509 |
| Bbv12I | GWGCWC | 5 cut(s) | 354, 486, 618, 684, 1077 |
| BbvCI | CCTCAGC | 1 cut(s) | 1088 |
| BbvI | GCAGC | 5 cut(s) | 996, 1160, 1222, 1318, 1350 |
| BceAI | ACGGC | 1 cut(s) | 1299 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 1510 |
| BciT130I | CCWGG | 2 cut(s) | 965, 1508 |
| BcoDI | GTCTC | 3 cut(s) | 1181, 1198, 1253 |
| BfaI | CTAG | 4 cut(s) | 96, 956, 1022, 1184 |
| BfuAI | ACCTGC | 1 cut(s) | 1038 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1018 |
| BglII | AGATCT | 2 cut(s) | 203, 269 |
| BisI | GCNGC | 5 cut(s) | 1010, 1174, 1236, 1332, 1364 |
| BlsI | GCNGC | 5 cut(s) | 1011, 1175, 1237, 1333, 1365 |
| Bme1390I | CCNGG | 2 cut(s) | 965, 1508 |
| Bme18I | GGWCC | 1 cut(s) | 1266 |
| BmgBI | CACGTC | 1 cut(s) | 1179 |
| BmgT120I | GGNCC | 2 cut(s) | 164, 1266 |
| BmiI | GGNNCC | 1 cut(s) | 1267 |
| BmrFI | CCNGG | 2 cut(s) | 965, 1508 |
| BmsI | GCATC | 1 cut(s) | 1153 |
| BpiI | GAAGAC | 3 cut(s) | 59, 125, 1509 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 998, 1030, 1178, 1210 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1088 |
| BsaJI | CCNNGG | 2 cut(s) | 529, 1490 |
| Bse1I | ACTGG | 4 cut(s) | 48, 114, 1101, 1503 |
| Bse3DI | GCAATG | 1 cut(s) | 602 |
| BseBI | CCWGG | 2 cut(s) | 965, 1508 |
| BseDI | CCNNGG | 2 cut(s) | 529, 1490 |
| BseGI | GGATG | 1 cut(s) | 1168 |
| BseMI | GCAATG | 1 cut(s) | 602 |
| BseNI | ACTGG | 4 cut(s) | 48, 114, 1101, 1503 |
| BseSI | GKGCMC | 1 cut(s) | 1498 |
| BseXI | GCAGC | 5 cut(s) | 996, 1160, 1222, 1318, 1350 |
| BsgI | GTGCAG | 3 cut(s) | 1016, 1159, 1197 |
| Bsh1236I | CGCG | 1 cut(s) | 548 |
| BshFI | GGCC | 1 cut(s) | 166 |
| BsiHKAI | GWGCWC | 5 cut(s) | 354, 486, 618, 684, 1077 |
| BsiSI | CCGG | 1 cut(s) | 9 |
| BslFI | GGGAC | 2 cut(s) | 1279, 1496 |
| BsmAI | GTCTC | 3 cut(s) | 1181, 1198, 1253 |
| BsmFI | GGGAC | 2 cut(s) | 1279, 1496 |
| BsnI | GGCC | 1 cut(s) | 166 |
| Bsp1286I | GDGCHC | 6 cut(s) | 354, 486, 618, 684, 1077, 1498 |
| Bsp1407I | TGTACA | 1 cut(s) | 27 |
| Bsp143I | GATC | 2 cut(s) | 203, 269 |
| Bsp19I | CCATGG | 1 cut(s) | 1490 |
| BspANI | GGCC | 1 cut(s) | 166 |
| BspFNI | CGCG | 1 cut(s) | 548 |
| BspLI | GGNNCC | 1 cut(s) | 1267 |
| BspMI | ACCTGC | 1 cut(s) | 1038 |
| BsrDI | GCAATG | 1 cut(s) | 602 |
| BsrGI | TGTACA | 1 cut(s) | 27 |
| BsrI | ACTGG | 4 cut(s) | 48, 114, 1101, 1503 |
| BssECI | CCNNGG | 2 cut(s) | 529, 1490 |
| BssMI | GATC | 2 cut(s) | 203, 269 |
| BssT1I | CCWWGG | 2 cut(s) | 529, 1490 |
| Bst2UI | CCWGG | 2 cut(s) | 965, 1508 |
| Bst4CI | ACNGT | 4 cut(s) | 1192, 1321, 1411, 1487 |
| Bst6I | CTCTTC | 1 cut(s) | 890 |
| BstAUI | TGTACA | 1 cut(s) | 27 |
| BstC8I | GCNNGC | 1 cut(s) | 486 |
| BstDSI | CCRYGG | 1 cut(s) | 1490 |
| BstF5I | GGATG | 1 cut(s) | 1168 |
| BstFNI | CGCG | 1 cut(s) | 548 |
| BstHHI | GCGC | 2 cut(s) | 550, 748 |
| BstKTI | GATC | 2 cut(s) | 206, 272 |
| BstMAI | GTCTC | 3 cut(s) | 1181, 1198, 1253 |
| BstMBI | GATC | 2 cut(s) | 203, 269 |
| BstNI | CCWGG | 2 cut(s) | 965, 1508 |
| BstSCI | CCNGG | 2 cut(s) | 963, 1506 |
| BstSLI | GKGCMC | 1 cut(s) | 1498 |
| BstUI | CGCG | 1 cut(s) | 548 |
| BstV1I | GCAGC | 5 cut(s) | 996, 1160, 1222, 1318, 1350 |
| BstV2I | GAAGAC | 3 cut(s) | 59, 125, 1509 |
| BstX2I | RGATCY | 2 cut(s) | 203, 269 |
| BstYI | RGATCY | 2 cut(s) | 203, 269 |
| BsuRI | GGCC | 1 cut(s) | 166 |
| BtgI | CCRYGG | 1 cut(s) | 1490 |
| BtrI | CACGTC | 1 cut(s) | 1179 |
| BtsCI | GGATG | 1 cut(s) | 1168 |
| BtsI | GCAGTG | 1 cut(s) | 1533 |
| BtsIMutI | CAGTG | 3 cut(s) | 1407, 1496, 1533 |
| BveI | ACCTGC | 1 cut(s) | 1038 |
| Cac8I | GCNNGC | 1 cut(s) | 486 |
| CfoI | GCGC | 2 cut(s) | 550, 748 |
| Cfr13I | GGNCC | 2 cut(s) | 164, 1266 |
| CsiI | ACCWGGT | 1 cut(s) | 1506 |
| Csp6I | GTAC | 6 cut(s) | 4, 28, 941, 979, 1027, 1317 |
| CviAII | CATG | 4 cut(s) | 1143, 1169, 1491, 1533 |
| CviQI | GTAC | 6 cut(s) | 4, 28, 941, 979, 1027, 1317 |
| DpnI | GATC | 2 cut(s) | 205, 271 |
| DpnII | GATC | 2 cut(s) | 203, 269 |
| Eam1104I | CTCTTC | 1 cut(s) | 890 |
| EarI | CTCTTC | 1 cut(s) | 890 |
| Ecl136II | GAGCTC | 5 cut(s) | 352, 484, 616, 682, 1075 |
| Eco130I | CCWWGG | 2 cut(s) | 529, 1490 |
| Eco24I | GRGCYC | 5 cut(s) | 354, 486, 618, 684, 1077 |
| Eco47I | GGWCC | 1 cut(s) | 1266 |
| Eco53kI | GAGCTC | 5 cut(s) | 352, 484, 616, 682, 1075 |
| Eco57I | CTGAAG | 5 cut(s) | 119, 386, 518, 716, 914 |
| EcoICRI | GAGCTC | 5 cut(s) | 352, 484, 616, 682, 1075 |
| EcoRII | CCWGG | 2 cut(s) | 963, 1506 |
| EcoT14I | CCWWGG | 2 cut(s) | 529, 1490 |
| EcoT38I | GRGCYC | 5 cut(s) | 354, 486, 618, 684, 1077 |
| ErhI | CCWWGG | 2 cut(s) | 529, 1490 |
| FaeI | CATG | 4 cut(s) | 1146, 1172, 1494, 1536 |
| FaqI | GGGAC | 2 cut(s) | 1279, 1496 |
| FatI | CATG | 4 cut(s) | 1142, 1168, 1490, 1532 |
| Fnu4HI | GCNGC | 5 cut(s) | 1010, 1174, 1236, 1332, 1364 |
| FokI | GGATG | 1 cut(s) | 1175 |
| FriOI | GRGCYC | 5 cut(s) | 354, 486, 618, 684, 1077 |
| Fsp4HI | GCNGC | 5 cut(s) | 1010, 1174, 1236, 1332, 1364 |
| FspBI | CTAG | 4 cut(s) | 96, 956, 1022, 1184 |
| GlaI | GCGC | 2 cut(s) | 549, 747 |
| GluI | GCNGC | 5 cut(s) | 1010, 1174, 1236, 1332, 1364 |
| HaeIII | GGCC | 1 cut(s) | 166 |
| HapII | CCGG | 1 cut(s) | 9 |
| HhaI | GCGC | 2 cut(s) | 550, 748 |
| Hin1II | CATG | 4 cut(s) | 1146, 1172, 1494, 1536 |
| Hin6I | GCGC | 2 cut(s) | 548, 746 |
| HinP1I | GCGC | 2 cut(s) | 548, 746 |
| HindIII | AAGCTT | 1 cut(s) | 244 |
| HpaII | CCGG | 1 cut(s) | 9 |
| HphI | GGTGA | 2 cut(s) | 1409, 1481 |
| Hpy166II | GTNNAC | 4 cut(s) | 941, 961, 1027, 1472 |
| Hpy188I | TCNGA | 2 cut(s) | 823, 1307 |
| Hpy188III | TCNNGA | 1 cut(s) | 989 |
| Hpy8I | GTNNAC | 4 cut(s) | 941, 961, 1027, 1472 |
| HpyCH4III | ACNGT | 4 cut(s) | 1192, 1321, 1411, 1487 |
| HpyCH4IV | ACGT | 1 cut(s) | 1178 |
| HpySE526I | ACGT | 1 cut(s) | 1178 |
| Hsp92II | CATG | 4 cut(s) | 1146, 1172, 1494, 1536 |
| HspAI | GCGC | 2 cut(s) | 548, 746 |
| Kzo9I | GATC | 2 cut(s) | 203, 269 |
| LmnI | GCTCC | 4 cut(s) | 357, 621, 687, 1080 |
| Lsp1109I | GCAGC | 5 cut(s) | 996, 1160, 1222, 1318, 1350 |
| LweI | GCATC | 1 cut(s) | 1153 |
| MabI | ACCWGGT | 1 cut(s) | 1506 |
| MaeI | CTAG | 4 cut(s) | 96, 956, 1022, 1184 |
| MaeII | ACGT | 1 cut(s) | 1178 |
| MaeIII | GTNAC | 2 cut(s) | 1179, 1405 |
| MalI | GATC | 2 cut(s) | 205, 271 |
| MboI | GATC | 2 cut(s) | 203, 269 |
| MboII | GAAGA | 9 cut(s) | 59, 125, 379, 511, 709, 907, 1394, 1435, 1514 |
| MfeI | CAATTG | 3 cut(s) | 187, 781, 1356 |
| MflI | RGATCY | 2 cut(s) | 203, 269 |
| MhlI | GDGCHC | 6 cut(s) | 354, 486, 618, 684, 1077, 1498 |
| MmeI | TCCRAC | 2 cut(s) | 1140, 1285 |
| MnlI | CCTC | 6 cut(s) | 30, 1024, 1083, 1270, 1298, 1353 |
| MseI | TTAA | 1 cut(s) | 1283 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1243 |
| MspI | CCGG | 1 cut(s) | 9 |
| MspR9I | CCNGG | 2 cut(s) | 965, 1508 |
| MunI | CAATTG | 3 cut(s) | 187, 781, 1356 |
| MvaI | CCWGG | 2 cut(s) | 965, 1508 |
| MvnI | CGCG | 1 cut(s) | 548 |
| NcoI | CCATGG | 1 cut(s) | 1490 |
| NdeII | GATC | 2 cut(s) | 203, 269 |
| NlaIII | CATG | 4 cut(s) | 1146, 1172, 1494, 1536 |
| NlaIV | GGNNCC | 1 cut(s) | 1267 |
| NmuCI | GTSAC | 2 cut(s) | 1179, 1405 |
| PfeI | GAWTC | 1 cut(s) | 1415 |
| PkrI | GCNGC | 5 cut(s) | 1011, 1175, 1237, 1333, 1365 |
| Psp124BI | GAGCTC | 5 cut(s) | 354, 486, 618, 684, 1077 |
| Psp6I | CCWGG | 2 cut(s) | 963, 1506 |
| PspGI | CCWGG | 2 cut(s) | 963, 1506 |
| PspN4I | GGNNCC | 1 cut(s) | 1267 |
| PspPI | GGNCC | 2 cut(s) | 164, 1266 |
| PsuI | RGATCY | 2 cut(s) | 203, 269 |
| RsaI | GTAC | 6 cut(s) | 5, 29, 942, 980, 1028, 1318 |
| RsaNI | GTAC | 6 cut(s) | 4, 28, 941, 979, 1027, 1317 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1243 |
| SacI | GAGCTC | 5 cut(s) | 354, 486, 618, 684, 1077 |
| SaqAI | TTAA | 1 cut(s) | 1283 |
| SatI | GCNGC | 5 cut(s) | 1010, 1174, 1236, 1332, 1364 |
| Sau3AI | GATC | 2 cut(s) | 203, 269 |
| Sau96I | GGNCC | 2 cut(s) | 164, 1266 |
| ScrFI | CCNGG | 2 cut(s) | 965, 1508 |
| SduI | GDGCHC | 6 cut(s) | 354, 486, 618, 684, 1077, 1498 |
| SexAI | ACCWGGT | 1 cut(s) | 1506 |
| SfaNI | GCATC | 1 cut(s) | 1153 |
| SinI | GGWCC | 1 cut(s) | 1266 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1243 |
| SspMI | CTAG | 4 cut(s) | 96, 956, 1022, 1184 |
| SstI | GAGCTC | 5 cut(s) | 354, 486, 618, 684, 1077 |
| StyD4I | CCNGG | 2 cut(s) | 963, 1506 |
| StyI | CCWWGG | 2 cut(s) | 529, 1490 |
| TaaI | ACNGT | 4 cut(s) | 1192, 1321, 1411, 1487 |
| TaiI | ACGT | 1 cut(s) | 1181 |
| TatI | WGTACW | 3 cut(s) | 27, 940, 978 |
| TfiI | GAWTC | 1 cut(s) | 1415 |
| Tru1I | TTAA | 1 cut(s) | 1283 |
| Tru9I | TTAA | 1 cut(s) | 1283 |
| TscAI | CASTG | 3 cut(s) | 1414, 1503, 1533 |
| TseFI | GTSAC | 2 cut(s) | 1179, 1405 |
| TseI | GCWGC | 5 cut(s) | 1009, 1173, 1235, 1331, 1363 |
| Tsp45I | GTSAC | 2 cut(s) | 1179, 1405 |
| TspGWI | ACGGA | 1 cut(s) | 1362 |
| TspRI | CASTG | 3 cut(s) | 1414, 1503, 1533 |
| VpaK11BI | GGWCC | 1 cut(s) | 1266 |
| XspI | CTAG | 4 cut(s) | 96, 956, 1022, 1184 |