RLG00000035124

Belongs to the DHHC palmitoyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
61270093 .. 61281503
11411 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000035124

Sequence Viewer

Length: 1434 bp
ATGCTGTCCCTTAGGCCCAGCTGCGTCTACACCAAGGCCAAGCTCCAATCCCTAGCCAATTGCGAGAAGGTCGACGACTTCCTCTCCAATATGTTGTCCCTCAGGCTCGACGAGAAGGTCGATTTCGAAGGCAAGACCAACCCGGACGGTACCTTCGCCGGCGAGAAGCCTTCTTCCCCGAGGAGGTCGTTCTGGATCGCCGAGGAGATCGATCTCGACCATCACTCACATCCTCTCCTTTCTCCGCCTCCGATGCATCCTAGATTGGAGACTTTGAGTTTTCGAAACAGGCTAAACCGACACCGTTTGCTTCTGGAACCTGGGAGTGGGAGGGCAGTTCATGTTGCTGCTCAGTATGGGCAAACATCTTTCTTGAACCACATTGTTGCAAAGTATCATGCTGATTTTGATGCACCTGATACTGAGGGTAGGAGTCCTCTTCATTGGGCTGCATATAAGGGATTTGCGGATACAGTTAGGTTGCTTCTGTTTAGAGATACAAGCCAAGGGAGGCAAGATAAAGAAGGTTGTACCCCTTTGCACTGGGCTGCTTTAAAAGGAAATGTGGACGCTTGCACTGTGCTTGTTCATGCAGGCACAAAGCAGGAATTAATGGTGAAAGACAATGCAGGTTTACGCCTGTTCAGATTGCATCTGATAAAGTCCAGCCAGCAGCGGGCTCAAGGAAACCACTGGTTAAAGAGAATTTGTGGTGGGAAGATTGCACATTTTGGTTTTGCTCCTATCTTGTTCTGCACAATAATCATTCAAACAGTTCTCTTTATGAACTCAGTTCTCGCAGCTCCTAATCTGACAAATGTTACTGCGGCTATTGGTGCAGTAGATCCTGGCTACATCAAAAGAGCAGGGGACTTGGGCAGTCATATAGATACAGAGGATCCTCTGTTAAATATTGATTTGAACAATTCATCTGTATGGATGGGAAATTGGTCTCAACTTTGTCCTACTTGCAAGTTTGACCATCATTGCCCCTGGATATCTAATTGTGTTGGCAAGAGAAACAAGCAAGATTTCTTTATTTTCATCTGCATGGGAACATTGACATCAAGCATTTGTGCTGCTGTTACAGTTCAAAGGATTTGGACTGCAGTGCCAACATGGCAAACAGAAGAAATACGGATTCATCATGTGATAGTTCAATATCCAATTCTTGTTGCATTTCTGTGTATTGACATTATTATTATGATTTCTACTATGACACAGTGGCACAAGCATCTCAGTCCAACAGCTCGTAATATCACAACTAATGAACTGGCAAATGCTATTCGTTATGGGTATCTTCGTGGTCCAGATGGGCGGTTTCGAAACCCGTATAATCATGGGTGCCGTAAGAACTGTGCAGATTTTTTCATTCAGGGCTATACAGACGAAGATGAAATTGCTTGGCCTCCATTGCAGGAGGTTGCCAGTTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

478

Amino Acids

53.72

Weight (kDa)

8.31

Isoelectric Point (pI)

38.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 114 - 201 7.9e-17 Ankyrin repeats (3 copies)
DHHC PF01529 324 - 427 9e-18 DHHC palmitoyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 116
Acc36I ACCTGC 1 cut(s) 620
Acc65I GGTACC 1 cut(s) 149
AccB1I GGYRCC 2 cut(s) 149, 1344
AccI GTMKAC 2 cut(s) 27, 72
AciI CCGC 5 cut(s) 245, 467, 676, 827, 1318
AclWI GGATC 4 cut(s) 203, 839, 893, 906
AcsI RAATTY 1 cut(s) 705
AfaI GTAC 2 cut(s) 151, 532
AfiI CCNNNNNNNGG 3 cut(s) 183, 326, 676
AgsI TTSAA 5 cut(s) 376, 770, 922, 1094, 1160
AjnI CCWGG 3 cut(s) 319, 847, 992
AluBI AGCT 4 cut(s) 21, 43, 803, 1250
AluI AGCT 4 cut(s) 21, 43, 803, 1250
Alw26I GTCTC 2 cut(s) 263, 957
AlwI GGATC 4 cut(s) 203, 839, 893, 906
Ama87I CYCGRG 1 cut(s) 178
AoxI GGCC 3 cut(s) 14, 36, 1406
ApeKI GCWGC 7 cut(s) 21, 347, 449, 548, 673, 800, 1079
ApoI RAATTY 1 cut(s) 705
ArsI GACNNNNNNTTYG 2 cut(s) 137, 169
AseI ATTAAT 1 cut(s) 611
Asp718I GGTACC 1 cut(s) 149
AspS9I GGNCC 2 cut(s) 15, 1307
AsuC2I CCSGG 1 cut(s) 143
AsuHPI GGTGA 1 cut(s) 628
AsuII TTCGAA 3 cut(s) 126, 283, 1324
AvaI CYCGRG 1 cut(s) 178
AvaII GGWCC 1 cut(s) 1307
AxyI CCTNAGG 2 cut(s) 11, 101
BamHI GGATCC 1 cut(s) 898
BanI GGYRCC 2 cut(s) 149, 1344
BanII GRGCYC 1 cut(s) 682
BbvI GCAGC 7 cut(s) 8, 334, 436, 535, 685, 812, 1066
BccI CCATC 4 cut(s) 228, 934, 990, 1307
BceAI ACGGC 1 cut(s) 1332
BciT130I CCWGG 3 cut(s) 321, 849, 994
BciVI GTATCC 1 cut(s) 463
BcnI CCSGG 1 cut(s) 143
BcoDI GTCTC 2 cut(s) 263, 957
BfaI CTAG 2 cut(s) 53, 261
BfmI CTRYAG 1 cut(s) 1107
BfuAI ACCTGC 1 cut(s) 620
BfuI GTATCC 1 cut(s) 463
BglI GCCNNNNNGGC 1 cut(s) 1120
BisI GCNGC 8 cut(s) 22, 348, 450, 549, 674, 801, 828, 1080
BlsI GCNGC 8 cut(s) 23, 349, 451, 550, 675, 802, 829, 1081
Bme1390I CCNGG 4 cut(s) 143, 321, 849, 994
Bme18I GGWCC 1 cut(s) 1307
BmeT110I CYCGRG 1 cut(s) 178
BmgT120I GGNCC 2 cut(s) 15, 1307
BmiI GGNNCC 4 cut(s) 151, 318, 900, 1346
BmrFI CCNGG 4 cut(s) 143, 321, 849, 994
BmrI ACTGGG 1 cut(s) 553
BmsI GCATC 5 cut(s) 243, 265, 400, 661, 1243
BmuI ACTGGG 1 cut(s) 553
Bpu14I TTCGAA 3 cut(s) 126, 283, 1324
BpuEI CTTGAG 1 cut(s) 666
BpuMI CCSGG 1 cut(s) 143
Bsa29I ATCGAT 1 cut(s) 210
BsaI GGTCTC 1 cut(s) 957
BsaJI CCNNGG 6 cut(s) 33, 179, 201, 320, 505, 992
BsaXI ACNNNNNCTCC 4 cut(s) 68, 98, 219, 249
Bsc4I CCNNNNNNNGG 3 cut(s) 183, 326, 676
Bse118I RCCGGY 1 cut(s) 158
Bse1I ACTGG 4 cut(s) 548, 698, 1278, 1428
Bse21I CCTNAGG 2 cut(s) 11, 101
Bse3DI GCAATG 2 cut(s) 985, 1412
BseBI CCWGG 3 cut(s) 321, 849, 994
BseCI ATCGAT 1 cut(s) 210
BseDI CCNNGG 6 cut(s) 33, 179, 201, 320, 505, 992
BseGI GGATG 3 cut(s) 229, 256, 945
BseLI CCNNNNNNNGG 3 cut(s) 183, 326, 676
BseMI GCAATG 2 cut(s) 985, 1412
BseMII CTCAG 5 cut(s) 115, 365, 414, 804, 1252
BseNI ACTGG 4 cut(s) 548, 698, 1278, 1428
BseRI GAGGAG 2 cut(s) 196, 218
BseXI GCAGC 7 cut(s) 8, 334, 436, 535, 685, 812, 1066
BseYI CCCAGC 1 cut(s) 17
BsgI GTGCAG 3 cut(s) 739, 858, 1380
BshFI GGCC 3 cut(s) 16, 38, 1408
BshNI GGYRCC 2 cut(s) 149, 1344
BshVI ATCGAT 1 cut(s) 210
BsiHKCI CYCGRG 1 cut(s) 178
BsiSI CCGG 2 cut(s) 143, 159
BslFI GGGAC 2 cut(s) 82, 884
BslI CCNNNNNNNGG 3 cut(s) 183, 326, 676
BsmAI GTCTC 2 cut(s) 263, 957
BsmFI GGGAC 2 cut(s) 82, 884
BsnI GGCC 3 cut(s) 16, 38, 1408
Bso31I GGTCTC 1 cut(s) 957
BsoBI CYCGRG 1 cut(s) 178
Bsp119I TTCGAA 3 cut(s) 126, 283, 1324
Bsp1286I GDGCHC 1 cut(s) 682
Bsp143I GATC 5 cut(s) 195, 207, 211, 844, 898
BspACI CCGC 5 cut(s) 245, 467, 676, 827, 1318
BspANI GGCC 3 cut(s) 16, 38, 1408
BspCNI CTCAG 5 cut(s) 114, 364, 415, 803, 1251
BspDI ATCGAT 1 cut(s) 210
BspLI GGNNCC 4 cut(s) 151, 318, 900, 1346
BspMAI CTGCAG 1 cut(s) 1111
BspMI ACCTGC 1 cut(s) 620
BspPI GGATC 4 cut(s) 203, 839, 893, 906
BspT104I TTCGAA 3 cut(s) 126, 283, 1324
BspT107I GGYRCC 2 cut(s) 149, 1344
BspTNI GGTCTC 1 cut(s) 957
BsrDI GCAATG 2 cut(s) 985, 1412
BsrFI RCCGGY 1 cut(s) 158
BsrI ACTGG 4 cut(s) 548, 698, 1278, 1428
BssAI RCCGGY 1 cut(s) 158
BssECI CCNNGG 6 cut(s) 33, 179, 201, 320, 505, 992
BssMI GATC 5 cut(s) 195, 207, 211, 844, 898
BssT1I CCWWGG 2 cut(s) 33, 505
Bst2UI CCWGG 3 cut(s) 321, 849, 994
Bst4CI ACNGT 8 cut(s) 149, 305, 475, 580, 775, 1090, 1224, 1358
Bst6I CTCTTC 1 cut(s) 444
BstBI TTCGAA 3 cut(s) 126, 283, 1324
BstC8I GCNNGC 5 cut(s) 160, 574, 595, 671, 678
BstDEI CTNAG 6 cut(s) 11, 101, 351, 423, 790, 1238
BstF5I GGATG 3 cut(s) 229, 256, 945
BstKTI GATC 5 cut(s) 198, 210, 214, 847, 901
BstMAI GTCTC 2 cut(s) 263, 957
BstMBI GATC 5 cut(s) 195, 207, 211, 844, 898
BstMWI GCNNNNNNNGC 4 cut(s) 253, 836, 1120, 1414
BstNI CCWGG 3 cut(s) 321, 849, 994
BstSCI CCNGG 4 cut(s) 141, 319, 847, 992
BstSFI CTRYAG 1 cut(s) 1107
BstV1I GCAGC 7 cut(s) 8, 334, 436, 535, 685, 812, 1066
BstX2I RGATCY 2 cut(s) 844, 898
BstYI RGATCY 2 cut(s) 844, 898
Bsu15I ATCGAT 1 cut(s) 210
Bsu36I CCTNAGG 2 cut(s) 11, 101
BsuI GTATCC 1 cut(s) 463
BsuRI GGCC 3 cut(s) 16, 38, 1408
BsuTUI ATCGAT 1 cut(s) 210
BtsCI GGATG 3 cut(s) 229, 256, 945
BtsI GCAGTG 1 cut(s) 1116
BtsIMutI CAGTG 5 cut(s) 541, 576, 691, 1116, 1229
BveI ACCTGC 1 cut(s) 620
Cac8I GCNNGC 5 cut(s) 160, 574, 595, 671, 678
Cfr10I RCCGGY 1 cut(s) 158
Cfr13I GGNCC 2 cut(s) 15, 1307
ClaI ATCGAT 1 cut(s) 210
CseI GACGC 2 cut(s) 13, 578
Csp6I GTAC 2 cut(s) 150, 531
CviAII CATG 7 cut(s) 341, 398, 590, 1051, 1119, 1148, 1340
CviQI GTAC 2 cut(s) 150, 531
DdeI CTNAG 6 cut(s) 11, 101, 351, 423, 790, 1238
DpnI GATC 5 cut(s) 197, 209, 213, 846, 900
DpnII GATC 5 cut(s) 195, 207, 211, 844, 898
DraI TTTAAA 1 cut(s) 555
DrdI GACNNNNNNGTC 1 cut(s) 116
DseDI GACNNNNNNGTC 1 cut(s) 116
Eam1104I CTCTTC 1 cut(s) 444
EarI CTCTTC 1 cut(s) 444
EciI GGCGGA 1 cut(s) 234
Eco130I CCWWGG 2 cut(s) 33, 505
Eco24I GRGCYC 1 cut(s) 682
Eco31I GGTCTC 1 cut(s) 957
Eco32I GATATC 1 cut(s) 999
Eco47I GGWCC 1 cut(s) 1307
Eco81I CCTNAGG 2 cut(s) 11, 101
Eco88I CYCGRG 1 cut(s) 178
EcoRII CCWGG 3 cut(s) 319, 847, 992
EcoRV GATATC 1 cut(s) 999
EcoT14I CCWWGG 2 cut(s) 33, 505
EcoT22I ATGCAT 1 cut(s) 258
EcoT38I GRGCYC 1 cut(s) 682
ErhI CCWWGG 2 cut(s) 33, 505
FaeI CATG 7 cut(s) 344, 401, 593, 1054, 1122, 1151, 1343
FaqI GGGAC 2 cut(s) 82, 884
FatI CATG 7 cut(s) 340, 397, 589, 1050, 1118, 1147, 1339
FauI CCCGC 1 cut(s) 669
FblI GTMKAC 2 cut(s) 27, 72
Fnu4HI GCNGC 8 cut(s) 22, 348, 450, 549, 674, 801, 828, 1080
FokI GGATG 3 cut(s) 216, 243, 952
FriOI GRGCYC 1 cut(s) 682
Fsp4HI GCNGC 8 cut(s) 22, 348, 450, 549, 674, 801, 828, 1080
FspBI CTAG 2 cut(s) 53, 261
GluI GCNGC 8 cut(s) 22, 348, 450, 549, 674, 801, 828, 1080
GsaI CCCAGC 1 cut(s) 21
HaeIII GGCC 3 cut(s) 16, 38, 1408
HapII CCGG 2 cut(s) 143, 159
HgaI GACGC 2 cut(s) 13, 578
Hin1II CATG 7 cut(s) 344, 401, 593, 1054, 1122, 1151, 1343
HincII GTYRAC 1 cut(s) 73
HindII GTYRAC 1 cut(s) 73
HinfI GANTC 2 cut(s) 433, 1141
HpaII CCGG 2 cut(s) 143, 159
HphI GGTGA 1 cut(s) 628
Hpy166II GTNNAC 4 cut(s) 28, 73, 568, 635
Hpy188I TCNGA 4 cut(s) 252, 647, 657, 813
Hpy188III TCNNGA 5 cut(s) 193, 215, 314, 373, 1310
Hpy8I GTNNAC 4 cut(s) 28, 73, 568, 635
Hpy99I CGWCG 2 cut(s) 77, 113
HpyAV CCTTC 6 cut(s) 61, 109, 122, 163, 180, 518
HpyCH4III ACNGT 8 cut(s) 149, 305, 475, 580, 775, 1090, 1224, 1358
HpyF10VI GCNNNNNNNGC 4 cut(s) 253, 836, 1120, 1414
HpyF3I CTNAG 6 cut(s) 11, 101, 351, 423, 790, 1238
Hsp92II CATG 7 cut(s) 344, 401, 593, 1054, 1122, 1151, 1343
KpnI GGTACC 1 cut(s) 153
KroI GCCGGC 1 cut(s) 158
KroNI GCCGGC 1 cut(s) 160
Kzo9I GATC 5 cut(s) 195, 207, 211, 844, 898
LmnI GCTCC 3 cut(s) 48, 745, 808
Lsp1109I GCAGC 7 cut(s) 8, 334, 436, 535, 685, 812, 1066
LweI GCATC 5 cut(s) 243, 265, 400, 661, 1243
MaeI CTAG 2 cut(s) 53, 261
MaeIII GTNAC 2 cut(s) 820, 1084
MalI GATC 5 cut(s) 197, 209, 213, 846, 900
MboI GATC 5 cut(s) 195, 207, 211, 844, 898
MboII GAAGA 6 cut(s) 165, 431, 730, 1142, 1292, 1403
MfeI CAATTG 1 cut(s) 58
MflI RGATCY 2 cut(s) 844, 898
MhlI GDGCHC 1 cut(s) 682
MluCI AATT 8 cut(s) 58, 608, 705, 925, 946, 1003, 1167, 1398
MlyI GAGTC 1 cut(s) 442
MmeI TCCRAC 1 cut(s) 1268
Mph1103I ATGCAT 1 cut(s) 258
MreI CGCCGGCG 1 cut(s) 158
MroNI GCCGGC 1 cut(s) 158
MseI TTAA 5 cut(s) 554, 611, 698, 908, 1432
MslI CAYNNNNRTG 3 cut(s) 934, 1049, 1183
MspA1I CMGCKG 2 cut(s) 21, 676
MspI CCGG 2 cut(s) 143, 159
MspR9I CCNGG 4 cut(s) 143, 321, 849, 994
MunI CAATTG 1 cut(s) 58
MvaI CCWGG 3 cut(s) 321, 849, 994
MwoI GCNNNNNNNGC 4 cut(s) 253, 836, 1120, 1414
NaeI GCCGGC 1 cut(s) 160
NciI CCSGG 1 cut(s) 143
NdeII GATC 5 cut(s) 195, 207, 211, 844, 898
NgoMIV GCCGGC 1 cut(s) 158
NlaIII CATG 7 cut(s) 344, 401, 593, 1054, 1122, 1151, 1343
NlaIV GGNNCC 4 cut(s) 151, 318, 900, 1346
NmeAIII GCCGAG 1 cut(s) 226
NsiI ATGCAT 1 cut(s) 258
NspV TTCGAA 3 cut(s) 126, 283, 1324
PcsI WCGNNNNNNNCGW 1 cut(s) 117
PdiI GCCGGC 1 cut(s) 160
PfeI GAWTC 1 cut(s) 1141
PkrI GCNGC 8 cut(s) 23, 349, 451, 550, 675, 802, 829, 1081
PleI GAGTC 1 cut(s) 441
PpsI GAGTC 1 cut(s) 441
PshBI ATTAAT 1 cut(s) 611
Psp6I CCWGG 3 cut(s) 319, 847, 992
PspFI CCCAGC 1 cut(s) 17
PspGI CCWGG 3 cut(s) 319, 847, 992
PspN4I GGNNCC 4 cut(s) 151, 318, 900, 1346
PspPI GGNCC 2 cut(s) 15, 1307
PstI CTGCAG 1 cut(s) 1111
PsuI RGATCY 2 cut(s) 844, 898
PvuII CAGCTG 1 cut(s) 21
RsaI GTAC 2 cut(s) 151, 532
RsaNI GTAC 2 cut(s) 150, 531
RseI CAYNNNNRTG 3 cut(s) 934, 1049, 1183
SalI GTCGAC 1 cut(s) 71
SaqAI TTAA 5 cut(s) 554, 611, 698, 908, 1432
SatI GCNGC 8 cut(s) 22, 348, 450, 549, 674, 801, 828, 1080
Sau3AI GATC 5 cut(s) 195, 207, 211, 844, 898
Sau96I GGNCC 2 cut(s) 15, 1307
SchI GAGTC 1 cut(s) 442
ScrFI CCNGG 4 cut(s) 143, 321, 849, 994
SduI GDGCHC 1 cut(s) 682
SfaNI GCATC 5 cut(s) 243, 265, 400, 661, 1243
SfcI CTRYAG 1 cut(s) 1107
SfuI TTCGAA 3 cut(s) 126, 283, 1324
SgrAI CRCCGGYG 1 cut(s) 158
SinI GGWCC 1 cut(s) 1307
SmiMI CAYNNNNRTG 3 cut(s) 934, 1049, 1183
SmlI CTYRAG 1 cut(s) 681
SmoI CTYRAG 1 cut(s) 681
Sse9I AATT 8 cut(s) 58, 608, 705, 925, 946, 1003, 1167, 1398
SsiI CCGC 5 cut(s) 245, 467, 676, 827, 1318
SspI AATATT 1 cut(s) 913
SspMI CTAG 2 cut(s) 53, 261
StyD4I CCNGG 4 cut(s) 141, 319, 847, 992
StyI CCWWGG 2 cut(s) 33, 505
TaaI ACNGT 8 cut(s) 149, 305, 475, 580, 775, 1090, 1224, 1358
TaqI TCGA 8 cut(s) 72, 108, 120, 126, 210, 216, 283, 1324
TasI AATT 8 cut(s) 58, 608, 705, 925, 946, 1003, 1167, 1398
TauI GCSGC 1 cut(s) 830
TfiI GAWTC 1 cut(s) 1141
Tru1I TTAA 5 cut(s) 554, 611, 698, 908, 1432
Tru9I TTAA 5 cut(s) 554, 611, 698, 908, 1432
TscAI CASTG 5 cut(s) 548, 583, 698, 1116, 1229
TseI GCWGC 7 cut(s) 21, 347, 449, 548, 673, 800, 1079
TspGWI ACGGA 1 cut(s) 1153
TspRI CASTG 5 cut(s) 548, 583, 698, 1116, 1229
VpaK11BI GGWCC 1 cut(s) 1307
VspI ATTAAT 1 cut(s) 611
XapI RAATTY 1 cut(s) 705
XmiI GTMKAC 2 cut(s) 27, 72
XspI CTAG 2 cut(s) 53, 261
Zsp2I ATGCAT 1 cut(s) 258
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.