Rh5AG372000

Belongs to the DHHC palmitoyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Forward (+)
63213048 .. 63214549
1502 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG372000.1

Sequence Viewer

Length: 396 bp
ATGTCATCCTTTCCTTTGTTTACACCATCTTCACTAGCTCGCTATTATCTTCTTGCAGAGAAACAAACAAGATTTCTTTATTTCCATCTGCATGGGAACATTGACATCAAGCATTTCTGCTGCTGTTACAGTTCAAAGGATTTGGACTGCTGTGCCAACATGGCAAACAGAAGAAATATGGATTCATCATTGGCACAAGCATCTCAGACAGCTCGTAATATCACAACTAATGGCCTGGCAAATGCTATTCGTTATGGTTATCTTCGTTGTCCAGATGGGCGGTTTCGAAACCCATATAATCATGGGTGCCGTAAGAACTGTGCAGATTTTTTCATTCAGGGCTATACAGACGAAGATGAAATTGCTTGGCCTCCATTGCAGCGGGTTGCCAGTTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

131

Amino Acids

15.05

Weight (kDa)

8.66

Isoelectric Point (pI)

40.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 306
AciI CCGC 2 cut(s) 280, 382
AgsI TTSAA 1 cut(s) 135
AjnI CCWGG 1 cut(s) 234
AluBI AGCT 2 cut(s) 38, 212
AluI AGCT 2 cut(s) 38, 212
AoxI GGCC 2 cut(s) 232, 368
ApeKI GCWGC 2 cut(s) 120, 379
AsuII TTCGAA 1 cut(s) 286
BanI GGYRCC 1 cut(s) 306
BbvI GCAGC 2 cut(s) 107, 391
BccI CCATC 3 cut(s) 34, 93, 269
BceAI ACGGC 1 cut(s) 294
BciT130I CCWGG 1 cut(s) 236
BfaI CTAG 1 cut(s) 35
BglI GCCNNNNNGGC 1 cut(s) 161
BisI GCNGC 2 cut(s) 121, 380
BlsI GCNGC 2 cut(s) 122, 381
Bme1390I CCNGG 1 cut(s) 236
BmiI GGNNCC 1 cut(s) 308
BmrFI CCNGG 1 cut(s) 236
BmsI GCATC 1 cut(s) 209
Bpu14I TTCGAA 1 cut(s) 286
Bse1I ACTGG 1 cut(s) 390
Bse3DI GCAATG 1 cut(s) 374
BseBI CCWGG 1 cut(s) 236
BseGI GGATG 1 cut(s) 5
BseMI GCAATG 1 cut(s) 374
BseMII CTCAG 1 cut(s) 218
BseNI ACTGG 1 cut(s) 390
BseXI GCAGC 2 cut(s) 107, 391
BsgI GTGCAG 1 cut(s) 342
BshFI GGCC 2 cut(s) 234, 370
BshNI GGYRCC 1 cut(s) 306
BsnI GGCC 2 cut(s) 234, 370
Bsp119I TTCGAA 1 cut(s) 286
BspACI CCGC 2 cut(s) 280, 382
BspANI GGCC 2 cut(s) 234, 370
BspCNI CTCAG 1 cut(s) 217
BspLI GGNNCC 1 cut(s) 308
BspT104I TTCGAA 1 cut(s) 286
BspT107I GGYRCC 1 cut(s) 306
BsrDI GCAATG 1 cut(s) 374
BsrI ACTGG 1 cut(s) 390
Bst2UI CCWGG 1 cut(s) 236
Bst4CI ACNGT 2 cut(s) 131, 320
BstBI TTCGAA 1 cut(s) 286
BstC8I GCNNGC 1 cut(s) 40
BstDEI CTNAG 1 cut(s) 204
BstF5I GGATG 1 cut(s) 5
BstMWI GCNNNNNNNGC 2 cut(s) 161, 376
BstNI CCWGG 1 cut(s) 236
BstSCI CCNGG 1 cut(s) 234
BstV1I GCAGC 2 cut(s) 107, 391
BstXI CCANNNNNNTGG 1 cut(s) 92
BsuRI GGCC 2 cut(s) 234, 370
BtsCI GGATG 1 cut(s) 5
Cac8I GCNNGC 1 cut(s) 40
CviAII CATG 3 cut(s) 92, 160, 302
CviJI RGCY 5 cut(s) 38, 212, 234, 342, 370
CviKI_1 RGCY 5 cut(s) 38, 212, 234, 342, 370
DdeI CTNAG 1 cut(s) 204
EcoRII CCWGG 1 cut(s) 234
FaeI CATG 3 cut(s) 95, 163, 305
FaiI YATR 8 cut(s) 93, 161, 179, 255, 295, 297, 303, 345
FatI CATG 3 cut(s) 91, 159, 301
FauI CCCGC 1 cut(s) 375
Fnu4HI GCNGC 2 cut(s) 121, 380
Fsp4HI GCNGC 2 cut(s) 121, 380
FspBI CTAG 1 cut(s) 35
GluI GCNGC 2 cut(s) 121, 380
HaeIII GGCC 2 cut(s) 234, 370
Hin1II CATG 3 cut(s) 95, 163, 305
HinfI GANTC 1 cut(s) 182
Hpy166II GTNNAC 1 cut(s) 21
Hpy188I TCNGA 1 cut(s) 207
Hpy188III TCNNGA 1 cut(s) 272
Hpy8I GTNNAC 1 cut(s) 21
HpyCH4III ACNGT 2 cut(s) 131, 320
HpyCH4V TGCA 4 cut(s) 56, 91, 323, 379
HpyF10VI GCNNNNNNNGC 2 cut(s) 161, 376
HpyF3I CTNAG 1 cut(s) 204
Hsp92II CATG 3 cut(s) 95, 163, 305
LpnPI CCDG 4 cut(s) 221, 248, 285, 323
Lsp1109I GCAGC 2 cut(s) 107, 391
LweI GCATC 1 cut(s) 209
MaeI CTAG 1 cut(s) 35
MaeIII GTNAC 1 cut(s) 125
MboII GAAGA 5 cut(s) 21, 41, 183, 254, 365
MluCI AATT 1 cut(s) 360
MnlI CCTC 1 cut(s) 381
MseI TTAA 1 cut(s) 394
MslI CAYNNNNRTG 1 cut(s) 90
MspA1I CMGCKG 1 cut(s) 382
MspR9I CCNGG 1 cut(s) 236
MvaI CCWGG 1 cut(s) 236
MwoI GCNNNNNNNGC 2 cut(s) 161, 376
NlaIII CATG 3 cut(s) 95, 163, 305
NlaIV GGNNCC 1 cut(s) 308
NspV TTCGAA 1 cut(s) 286
PfeI GAWTC 1 cut(s) 182
PkrI GCNGC 2 cut(s) 122, 381
Psp6I CCWGG 1 cut(s) 234
PspGI CCWGG 1 cut(s) 234
PspN4I GGNNCC 1 cut(s) 308
RseI CAYNNNNRTG 1 cut(s) 90
SaqAI TTAA 1 cut(s) 394
SatI GCNGC 2 cut(s) 121, 380
ScrFI CCNGG 1 cut(s) 236
SetI ASST 2 cut(s) 40, 214
SfaNI GCATC 1 cut(s) 209
SfuI TTCGAA 1 cut(s) 286
SmiMI CAYNNNNRTG 1 cut(s) 90
Sse9I AATT 1 cut(s) 360
SsiI CCGC 2 cut(s) 280, 382
SspMI CTAG 1 cut(s) 35
StyD4I CCNGG 1 cut(s) 234
TaaI ACNGT 2 cut(s) 131, 320
TaqI TCGA 1 cut(s) 286
TasI AATT 1 cut(s) 360
TfiI GAWTC 1 cut(s) 182
Tru1I TTAA 1 cut(s) 394
Tru9I TTAA 1 cut(s) 394
TseI GCWGC 2 cut(s) 120, 379
TspDTI ATGAA 3 cut(s) 174, 322, 372
XspI CTAG 1 cut(s) 35
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.