polyadenylate-binding protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G10350 AT5G10350 AT5G10350 AT5G10350 AT5G10350 AT5G10350 AT5G65260 |
| fragaria_vesca | FvH4_1g20430 FvH4_1g20430 FvH4_1g20440 FvH4_1g20440 |
| malus_domestica | MD00G1037000.v1.1 MD01G1034000.v1.1 MD01G1034100.v1.1 |
| prunus_persica | Prupe.6G191400_v2.0.a1 Prupe.6G191400_v2.0.a1 Prupe.6G191400_v2.0.a1 |
| pyrus_communis | pycom01g06120 pycom15g28270 |
| rosa_chinensis | RchiOBHm_Chr2g0112681 RchiOBHm_Chr2g0112701 RchiOBHm_Chr2g0112711 |
| rosa_laevigata | RLG00000018002 RLG00000018003 |
| rosa_multiflora | Rmu_co8049960.1_g000001 Rmu_sc0001708.1_g000046 Rmu_sc0001708.1_g000047 Rmu_sc0037397.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00131230 Rroxscaffold_2G00131240 Rroxscaffold_7G00188180 |
| rosa_rugosa | Rorug02G0181900 |
| rosa_samantha | Rh2AG236400 Rh2BG249200 Rh2BG249300 Rh2CG240200 Rh2CG240300 Rh2CG240400 Rh2DG243700 Rh2DG243800 Rh2DG243900 Rh3BG013000 Rh5BG229700 |
| rosa_wichuraiana | Rw2G018260 Rw2G018270 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 119 |
| AciI | CCGC | 2 cut(s) | 102, 117 |
| AcyI | GRCGYC | 1 cut(s) | 114 |
| AfaI | GTAC | 1 cut(s) | 26 |
| AfeI | AGCGCT | 1 cut(s) | 149 |
| AflIII | ACRYGT | 1 cut(s) | 93 |
| AgsI | TTSAA | 1 cut(s) | 154 |
| AluBI | AGCT | 2 cut(s) | 130, 173 |
| AluI | AGCT | 2 cut(s) | 130, 173 |
| Alw26I | GTCTC | 1 cut(s) | 41 |
| Aor51HI | AGCGCT | 1 cut(s) | 149 |
| AoxI | GGCC | 1 cut(s) | 195 |
| ApeKI | GCWGC | 3 cut(s) | 173, 176, 221 |
| AspLEI | GCGC | 1 cut(s) | 150 |
| BbvI | GCAGC | 3 cut(s) | 160, 163, 208 |
| BccI | CCATC | 2 cut(s) | 84, 154 |
| BceAI | ACGGC | 1 cut(s) | 104 |
| BcoDI | GTCTC | 1 cut(s) | 41 |
| BfoI | RGCGCY | 1 cut(s) | 151 |
| BisI | GCNGC | 4 cut(s) | 117, 174, 177, 222 |
| BlsI | GCNGC | 4 cut(s) | 118, 175, 178, 223 |
| BmsI | GCATC | 1 cut(s) | 180 |
| BsaHI | GRCGYC | 1 cut(s) | 114 |
| BsaJI | CCNNGG | 1 cut(s) | 198 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 56, 86 |
| BseDI | CCNNGG | 1 cut(s) | 198 |
| BseGI | GGATG | 2 cut(s) | 36, 139 |
| BseRI | GAGGAG | 1 cut(s) | 179 |
| BseXI | GCAGC | 3 cut(s) | 160, 163, 208 |
| BshFI | GGCC | 1 cut(s) | 197 |
| BsmAI | GTCTC | 1 cut(s) | 41 |
| BsnI | GGCC | 1 cut(s) | 197 |
| BspACI | CCGC | 2 cut(s) | 102, 117 |
| BspANI | GGCC | 1 cut(s) | 197 |
| BssECI | CCNNGG | 1 cut(s) | 198 |
| BssNI | GRCGYC | 1 cut(s) | 114 |
| BssT1I | CCWWGG | 1 cut(s) | 198 |
| Bst6I | CTCTTC | 1 cut(s) | 3 |
| BstACI | GRCGYC | 1 cut(s) | 114 |
| BstC8I | GCNNGC | 1 cut(s) | 195 |
| BstF5I | GGATG | 2 cut(s) | 36, 139 |
| BstH2I | RGCGCY | 1 cut(s) | 151 |
| BstHHI | GCGC | 1 cut(s) | 150 |
| BstMAI | GTCTC | 1 cut(s) | 41 |
| BstNSI | RCATGY | 1 cut(s) | 97 |
| BstV1I | GCAGC | 3 cut(s) | 160, 163, 208 |
| BsuRI | GGCC | 1 cut(s) | 197 |
| BtsCI | GGATG | 2 cut(s) | 36, 139 |
| Cac8I | GCNNGC | 1 cut(s) | 195 |
| CfoI | GCGC | 1 cut(s) | 150 |
| CseI | GACGC | 1 cut(s) | 122 |
| Csp6I | GTAC | 1 cut(s) | 25 |
| CviAII | CATG | 2 cut(s) | 17, 94 |
| CviJI | RGCY | 3 cut(s) | 130, 173, 197 |
| CviKI_1 | RGCY | 3 cut(s) | 130, 173, 197 |
| CviQI | GTAC | 1 cut(s) | 25 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 119 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 119 |
| Eam1104I | CTCTTC | 1 cut(s) | 3 |
| EarI | CTCTTC | 1 cut(s) | 3 |
| Eco130I | CCWWGG | 1 cut(s) | 198 |
| Eco47III | AGCGCT | 1 cut(s) | 149 |
| EcoT14I | CCWWGG | 1 cut(s) | 198 |
| ErhI | CCWWGG | 1 cut(s) | 198 |
| FaeI | CATG | 2 cut(s) | 20, 97 |
| FaiI | YATR | 2 cut(s) | 18, 95 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 134, 166 |
| FatI | CATG | 2 cut(s) | 16, 93 |
| Fnu4HI | GCNGC | 4 cut(s) | 117, 174, 177, 222 |
| FokI | GGATG | 2 cut(s) | 23, 146 |
| Fsp4HI | GCNGC | 4 cut(s) | 117, 174, 177, 222 |
| GlaI | GCGC | 1 cut(s) | 149 |
| GluI | GCNGC | 4 cut(s) | 117, 174, 177, 222 |
| HaeII | RGCGCY | 1 cut(s) | 151 |
| HaeIII | GGCC | 1 cut(s) | 197 |
| HgaI | GACGC | 1 cut(s) | 122 |
| HhaI | GCGC | 1 cut(s) | 150 |
| Hin1I | GRCGYC | 1 cut(s) | 114 |
| Hin1II | CATG | 2 cut(s) | 20, 97 |
| Hin6I | GCGC | 1 cut(s) | 148 |
| HinP1I | GCGC | 1 cut(s) | 148 |
| HincII | GTYRAC | 1 cut(s) | 91 |
| HindII | GTYRAC | 1 cut(s) | 91 |
| HinfI | GANTC | 1 cut(s) | 71 |
| Hpy166II | GTNNAC | 3 cut(s) | 25, 91, 99 |
| Hpy8I | GTNNAC | 3 cut(s) | 25, 91, 99 |
| Hpy99I | CGWCG | 4 cut(s) | 89, 110, 113, 116 |
| HpyAV | CCTTC | 2 cut(s) | 148, 202 |
| HpyCH4IV | ACGT | 1 cut(s) | 87 |
| HpyCH4V | TGCA | 1 cut(s) | 193 |
| HpySE526I | ACGT | 1 cut(s) | 87 |
| Hsp92I | GRCGYC | 1 cut(s) | 114 |
| Hsp92II | CATG | 2 cut(s) | 20, 97 |
| HspAI | GCGC | 1 cut(s) | 148 |
| LmnI | GCTCC | 2 cut(s) | 29, 127 |
| LpnPI | CCDG | 3 cut(s) | 54, 116, 179 |
| Lsp1109I | GCAGC | 3 cut(s) | 160, 163, 208 |
| LweI | GCATC | 1 cut(s) | 180 |
| MaeII | ACGT | 1 cut(s) | 87 |
| MboII | GAAGA | 2 cut(s) | 20, 154 |
| MlyI | GAGTC | 1 cut(s) | 65 |
| MnlI | CCTC | 6 cut(s) | 4, 13, 52, 157, 160, 191 |
| NlaIII | CATG | 2 cut(s) | 20, 97 |
| NspI | RCATGY | 1 cut(s) | 97 |
| PciI | ACATGT | 1 cut(s) | 93 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 117 |
| PkrI | GCNGC | 4 cut(s) | 118, 175, 178, 223 |
| PleI | GAGTC | 1 cut(s) | 65 |
| PpsI | GAGTC | 1 cut(s) | 65 |
| PscI | ACATGT | 1 cut(s) | 93 |
| RsaI | GTAC | 1 cut(s) | 26 |
| RsaNI | GTAC | 1 cut(s) | 25 |
| SatI | GCNGC | 4 cut(s) | 117, 174, 177, 222 |
| SchI | GAGTC | 1 cut(s) | 65 |
| SetI | ASST | 5 cut(s) | 24, 90, 132, 175, 204 |
| SfaNI | GCATC | 1 cut(s) | 180 |
| SsiI | CCGC | 2 cut(s) | 102, 117 |
| StyI | CCWWGG | 1 cut(s) | 198 |
| TaiI | ACGT | 1 cut(s) | 90 |
| TauI | GCSGC | 1 cut(s) | 119 |
| TseI | GCWGC | 3 cut(s) | 173, 176, 221 |
| TspDTI | ATGAA | 1 cut(s) | 155 |
| TspGWI | ACGGA | 2 cut(s) | 42, 173 |
| XceI | RCATGY | 1 cut(s) | 97 |