polyadenylate-binding protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G10350 AT5G10350 AT5G10350 AT5G10350 AT5G10350 AT5G10350 AT5G65260 |
| fragaria_vesca | FvH4_1g20430 FvH4_1g20430 FvH4_1g20440 FvH4_1g20440 |
| malus_domestica | MD00G1037000.v1.1 MD01G1034000.v1.1 MD01G1034100.v1.1 |
| prunus_persica | Prupe.6G191400_v2.0.a1 Prupe.6G191400_v2.0.a1 Prupe.6G191400_v2.0.a1 |
| pyrus_communis | pycom01g06120 pycom15g28270 |
| rosa_chinensis | RchiOBHm_Chr2g0112681 RchiOBHm_Chr2g0112701 RchiOBHm_Chr2g0112711 |
| rosa_laevigata | RLG00000018002 RLG00000018003 |
| rosa_multiflora | Rmu_co8049960.1_g000001 Rmu_sc0001708.1_g000046 Rmu_sc0001708.1_g000047 Rmu_sc0037397.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00131230 Rroxscaffold_2G00131240 Rroxscaffold_7G00188180 |
| rosa_rugosa | Rorug02G0181900 |
| rosa_samantha | Rh2AG236400 Rh2BG249200 Rh2BG249300 Rh2CG240200 Rh2CG240300 Rh2CG240400 Rh2DG243700 Rh2DG243800 Rh2DG243900 Rh3BG013000 Rh5BG229700 |
| rosa_wichuraiana | Rw2G018260 Rw2G018270 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 36 |
| AciI | CCGC | 1 cut(s) | 80 |
| AclWI | GGATC | 1 cut(s) | 35 |
| AluBI | AGCT | 1 cut(s) | 56 |
| AluI | AGCT | 1 cut(s) | 56 |
| Alw26I | GTCTC | 1 cut(s) | 138 |
| AlwI | GGATC | 1 cut(s) | 35 |
| AoxI | GGCC | 1 cut(s) | 6 |
| ApeKI | GCWGC | 2 cut(s) | 32, 53 |
| AspLEI | GCGC | 1 cut(s) | 37 |
| BbvI | GCAGC | 2 cut(s) | 19, 65 |
| BcoDI | GTCTC | 1 cut(s) | 138 |
| BfmI | CTRYAG | 1 cut(s) | 51 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 14 |
| BisI | GCNGC | 3 cut(s) | 33, 54, 81 |
| BlsI | GCNGC | 3 cut(s) | 34, 55, 82 |
| Bse3DI | GCAATG | 1 cut(s) | 115 |
| BseMI | GCAATG | 1 cut(s) | 115 |
| BseMII | CTCAG | 1 cut(s) | 77 |
| BseXI | GCAGC | 2 cut(s) | 19, 65 |
| BshFI | GGCC | 1 cut(s) | 8 |
| BsmAI | GTCTC | 1 cut(s) | 138 |
| BsmBI | CGTCTC | 1 cut(s) | 138 |
| BsnI | GGCC | 1 cut(s) | 8 |
| Bsp143I | GATC | 1 cut(s) | 40 |
| BspACI | CCGC | 1 cut(s) | 80 |
| BspANI | GGCC | 1 cut(s) | 8 |
| BspCNI | CTCAG | 1 cut(s) | 76 |
| BspMAI | CTGCAG | 1 cut(s) | 55 |
| BspPI | GGATC | 1 cut(s) | 35 |
| BsrDI | GCAATG | 1 cut(s) | 115 |
| BssMI | GATC | 1 cut(s) | 40 |
| Bst4CI | ACNGT | 1 cut(s) | 29 |
| BstC8I | GCNNGC | 1 cut(s) | 6 |
| BstDEI | CTNAG | 1 cut(s) | 63 |
| BstHHI | GCGC | 1 cut(s) | 37 |
| BstKTI | GATC | 1 cut(s) | 43 |
| BstMAI | GTCTC | 1 cut(s) | 138 |
| BstMBI | GATC | 1 cut(s) | 40 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 14, 53 |
| BstSFI | CTRYAG | 1 cut(s) | 51 |
| BstV1I | GCAGC | 2 cut(s) | 19, 65 |
| BstX2I | RGATCY | 1 cut(s) | 40 |
| BstYI | RGATCY | 1 cut(s) | 40 |
| BsuRI | GGCC | 1 cut(s) | 8 |
| Cac8I | GCNNGC | 1 cut(s) | 6 |
| CfoI | GCGC | 1 cut(s) | 37 |
| CviJI | RGCY | 3 cut(s) | 8, 56, 83 |
| CviKI_1 | RGCY | 3 cut(s) | 8, 56, 83 |
| DdeI | CTNAG | 1 cut(s) | 63 |
| DpnI | GATC | 1 cut(s) | 42 |
| DpnII | GATC | 1 cut(s) | 40 |
| Esp3I | CGTCTC | 1 cut(s) | 138 |
| FaiI | YATR | 2 cut(s) | 141, 143 |
| Fnu4HI | GCNGC | 3 cut(s) | 33, 54, 81 |
| Fsp4HI | GCNGC | 3 cut(s) | 33, 54, 81 |
| FspI | TGCGCA | 1 cut(s) | 36 |
| GlaI | GCGC | 1 cut(s) | 36 |
| GluI | GCNGC | 3 cut(s) | 33, 54, 81 |
| HaeIII | GGCC | 1 cut(s) | 8 |
| HhaI | GCGC | 1 cut(s) | 37 |
| Hin6I | GCGC | 1 cut(s) | 35 |
| HinP1I | GCGC | 1 cut(s) | 35 |
| HinfI | GANTC | 1 cut(s) | 59 |
| HpyAV | CCTTC | 1 cut(s) | 13 |
| HpyCH4III | ACNGT | 1 cut(s) | 29 |
| HpyCH4IV | ACGT | 1 cut(s) | 131 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 53 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 14, 53 |
| HpyF3I | CTNAG | 1 cut(s) | 63 |
| HpySE526I | ACGT | 1 cut(s) | 131 |
| HspAI | GCGC | 1 cut(s) | 35 |
| Kzo9I | GATC | 1 cut(s) | 40 |
| LpnPI | CCDG | 3 cut(s) | 50, 57, 135 |
| Lsp1109I | GCAGC | 2 cut(s) | 19, 65 |
| MaeII | ACGT | 1 cut(s) | 131 |
| MaeIII | GTNAC | 2 cut(s) | 119, 157 |
| MalI | GATC | 1 cut(s) | 42 |
| MboI | GATC | 1 cut(s) | 40 |
| MflI | RGATCY | 1 cut(s) | 40 |
| MspA1I | CMGCKG | 1 cut(s) | 56 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 14, 53 |
| NdeII | GATC | 1 cut(s) | 40 |
| NsbI | TGCGCA | 1 cut(s) | 36 |
| PfeI | GAWTC | 1 cut(s) | 59 |
| PkrI | GCNGC | 3 cut(s) | 34, 55, 82 |
| PstI | CTGCAG | 1 cut(s) | 55 |
| PsuI | RGATCY | 1 cut(s) | 40 |
| PvuII | CAGCTG | 1 cut(s) | 56 |
| SatI | GCNGC | 3 cut(s) | 33, 54, 81 |
| Sau3AI | GATC | 1 cut(s) | 40 |
| SetI | ASST | 3 cut(s) | 58, 134, 148 |
| SfcI | CTRYAG | 1 cut(s) | 51 |
| SgeI | CNNG | 6 cut(s) | 17, 50, 56, 77, 85, 162 |
| SsiI | CCGC | 1 cut(s) | 80 |
| TaaI | ACNGT | 1 cut(s) | 29 |
| TaiI | ACGT | 1 cut(s) | 134 |
| TauI | GCSGC | 1 cut(s) | 83 |
| TfiI | GAWTC | 1 cut(s) | 59 |
| TseI | GCWGC | 2 cut(s) | 32, 53 |
| TspDTI | ATGAA | 1 cut(s) | 102 |