Rmu_co8270721.1_g000001

Elongation factor G C-terminus

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8270721.1
Physical Location & Seq
Forward (+)
1 .. 827
827 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8270721.1_g000001.1.cds

Sequence Viewer

Length: 821 bp
gaatcaaccacacccgacacccgaaagctccgaaacatctgcgtcctggcccacgtcgaccacggcaagacgaccctctgcgaccacctcatctccggctccgacagcggcatcatccaccccaagctcgccgggcgcctccgctacatggactccctcctcgaggagcagcgccgcgccatcaccatgaagagctcctccatcgccctccgccactgcgaccactccgtcaccgtcatcgactccccgggccacatggacttctgcagcgaagtctccaccgccgccaggctcagcgacggcgcgttgatcctagtcgacgccgtcgagggcgtccacatccaaacgcacgccgtcttgcgccaggcctggatcgagaagctcacgccgtgcttggtgatcaacaagatcgataggttgatcgccgagctgggaatgagccctatggatgcctatgtaaagttgttgaagattgttcatgaggttaataacattgttagtgcttttaaatctgtgaaatacttgaacgatgtggatgccattctttcggggccggccggcgccgacgagttggcgtttgaggagattgaggatgatgaggagctcatgtttcagccccagaagggcaatgtggcctttgtgtgtgctttggatggttgggggtttagtattaggcaatttgccgagttttatgaggcgaaattcgggtggagtactaatgcattgcagaaggctttatgggggccttggtattttaatcacaaggagaagaagattgtgggacagaagggtgtggcgggttttaaaaaggctcggccgat
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

273

Amino Acids

30.33

Weight (kDa)

6.28

Isoelectric Point (pI)

40.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 227
AbsI CCTCGAGG 1 cut(s) 161
AccB1I GGYRCC 2 cut(s) 135, 560
AccI GTMKAC 2 cut(s) 57, 318
AccII CGCG 2 cut(s) 177, 305
AciI CCGC 7 cut(s) 108, 142, 175, 211, 282, 285, 797
AclWI GGATC 2 cut(s) 304, 380
AcoI YGGCCR 2 cut(s) 555, 815
AcsI RAATTY 1 cut(s) 701
AcyI GRCGYC 4 cut(s) 136, 321, 333, 561
AdeI CACNNNGTG 1 cut(s) 390
AfaI GTAC 1 cut(s) 715
AfiI CCNNNNNNNGG 4 cut(s) 148, 163, 288, 623
AgsI TTSAA 2 cut(s) 469, 526
AjiI CACGTC 1 cut(s) 55
AjnI CCWGG 4 cut(s) 45, 287, 363, 368
AluBI AGCT 6 cut(s) 28, 127, 195, 382, 430, 604
AluI AGCT 6 cut(s) 28, 127, 195, 382, 430, 604
Alw21I GWGCWC 2 cut(s) 197, 606
Alw26I GTCTC 1 cut(s) 280
AlwI GGATC 2 cut(s) 304, 380
Ama87I CYCGRG 2 cut(s) 161, 247
AoxI GGCC 8 cut(s) 48, 250, 366, 551, 555, 633, 743, 815
ApeKI GCWGC 2 cut(s) 169, 267
ApoI RAATTY 1 cut(s) 701
AspLEI GCGC 6 cut(s) 138, 174, 179, 305, 363, 563
AspS9I GGNCC 4 cut(s) 49, 250, 551, 743
AsuC2I CCSGG 3 cut(s) 133, 248, 249
AsuHPI GGTGA 3 cut(s) 175, 223, 409
AvaI CYCGRG 2 cut(s) 161, 247
BanI GGYRCC 2 cut(s) 135, 560
BanII GRGCYC 3 cut(s) 197, 443, 606
Bbv12I GWGCWC 2 cut(s) 197, 606
BbvI GCAGC 2 cut(s) 181, 279
BccI CCATC 3 cut(s) 188, 209, 647
BceAI ACGGC 5 cut(s) 79, 308, 316, 338, 373
BcgI CGANNNNNNTGC 4 cut(s) 21, 55, 518, 552
BciT130I CCWGG 4 cut(s) 47, 289, 365, 370
BclI TGATCA 1 cut(s) 399
BcnI CCSGG 3 cut(s) 133, 248, 249
BcoDI GTCTC 1 cut(s) 280
BfaI CTAG 1 cut(s) 314
BfmI CTRYAG 1 cut(s) 265
BfoI RGCGCY 3 cut(s) 139, 175, 564
BisI GCNGC 5 cut(s) 109, 170, 175, 268, 285
BlpI GCTNAGC 1 cut(s) 293
BlsI GCNGC 5 cut(s) 110, 171, 176, 269, 286
BmcAI AGTACT 1 cut(s) 715
Bme1390I CCNGG 7 cut(s) 47, 133, 248, 249, 289, 365, 370
BmeT110I CYCGRG 2 cut(s) 161, 247
BmgBI CACGTC 1 cut(s) 55
BmgT120I GGNCC 4 cut(s) 49, 250, 551, 743
BmiI GGNNCC 5 cut(s) 100, 137, 552, 562, 744
BmrFI CCNGG 7 cut(s) 47, 133, 248, 249, 289, 365, 370
BmsI GCATC 3 cut(s) 120, 439, 526
Bpu1102I GCTNAGC 1 cut(s) 293
BpuMI CCSGG 3 cut(s) 133, 248, 249
Bsa29I ATCGAT 1 cut(s) 411
BsaHI GRCGYC 4 cut(s) 136, 321, 333, 561
BsaJI CCNNGG 4 cut(s) 61, 246, 247, 746
BsaXI ACNNNNNCTCC 6 cut(s) 77, 107, 137, 167, 593, 623
Bsc4I CCNNNNNNNGG 4 cut(s) 148, 163, 288, 623
Bse118I RCCGGY 2 cut(s) 553, 557
Bse3DI GCAATG 2 cut(s) 634, 722
BseBI CCWGG 4 cut(s) 47, 289, 365, 370
BseCI ATCGAT 1 cut(s) 411
BseDI CCNNGG 4 cut(s) 61, 246, 247, 746
BseGI GGATG 6 cut(s) 114, 339, 454, 541, 598, 658
BseLI CCNNNNNNNGG 4 cut(s) 148, 163, 288, 623
BseMI GCAATG 2 cut(s) 634, 722
BseMII CTCAG 1 cut(s) 307
BseRI GAGGAG 5 cut(s) 149, 179, 187, 596, 614
BseX3I CGGCCG 2 cut(s) 555, 815
BseXI GCAGC 2 cut(s) 181, 279
BseYI CCCAGC 1 cut(s) 430
Bsh1236I CGCG 2 cut(s) 177, 305
Bsh1285I CGRYCG 2 cut(s) 558, 818
BshFI GGCC 8 cut(s) 50, 252, 368, 553, 557, 635, 745, 817
BshNI GGYRCC 2 cut(s) 135, 560
BshVI ATCGAT 1 cut(s) 411
BsiEI CGRYCG 2 cut(s) 558, 818
BsiHKAI GWGCWC 2 cut(s) 197, 606
BsiHKCI CYCGRG 2 cut(s) 161, 247
BsiSI CCGG 5 cut(s) 96, 132, 248, 554, 558
BslFI GGGAC 1 cut(s) 795
BslI CCNNNNNNNGG 4 cut(s) 148, 163, 288, 623
BsmAI GTCTC 1 cut(s) 280
BsmFI GGGAC 1 cut(s) 795
BsnI GGCC 8 cut(s) 50, 252, 368, 553, 557, 635, 745, 817
BsoBI CYCGRG 2 cut(s) 161, 247
Bsp1286I GDGCHC 3 cut(s) 197, 443, 606
Bsp143I GATC 5 cut(s) 309, 372, 399, 408, 420
Bsp1720I GCTNAGC 1 cut(s) 293
BspACI CCGC 7 cut(s) 108, 142, 175, 211, 282, 285, 797
BspANI GGCC 8 cut(s) 50, 252, 368, 553, 557, 635, 745, 817
BspCNI CTCAG 1 cut(s) 306
BspDI ATCGAT 1 cut(s) 411
BspFNI CGCG 2 cut(s) 177, 305
BspHI TCATGA 1 cut(s) 478
BspLI GGNNCC 5 cut(s) 100, 137, 552, 562, 744
BspMAI CTGCAG 1 cut(s) 269
BspPI GGATC 2 cut(s) 304, 380
BspQI GCTCTTC 1 cut(s) 185
BspT107I GGYRCC 2 cut(s) 135, 560
BsrDI GCAATG 2 cut(s) 634, 722
BsrFI RCCGGY 2 cut(s) 553, 557
BssAI RCCGGY 2 cut(s) 553, 557
BssECI CCNNGG 4 cut(s) 61, 246, 247, 746
BssMI GATC 5 cut(s) 309, 372, 399, 408, 420
BssNI GRCGYC 4 cut(s) 136, 321, 333, 561
BssT1I CCWWGG 1 cut(s) 746
Bst2UI CCWGG 4 cut(s) 47, 289, 365, 370
Bst4CI ACNGT 1 cut(s) 235
Bst6I CTCTTC 1 cut(s) 185
BstACI GRCGYC 4 cut(s) 136, 321, 333, 561
BstC8I GCNNGC 4 cut(s) 129, 351, 555, 559
BstDEI CTNAG 1 cut(s) 293
BstDSI CCRYGG 1 cut(s) 61
BstENI CCTNNNNNAGG 1 cut(s) 161
BstF5I GGATG 6 cut(s) 114, 339, 454, 541, 598, 658
BstFNI CGCG 2 cut(s) 177, 305
BstH2I RGCGCY 3 cut(s) 139, 175, 564
BstHHI GCGC 6 cut(s) 138, 174, 179, 305, 363, 563
BstKTI GATC 5 cut(s) 312, 375, 402, 411, 423
BstMAI GTCTC 1 cut(s) 280
BstMBI GATC 5 cut(s) 309, 372, 399, 408, 420
BstMCI CGRYCG 2 cut(s) 558, 818
BstMWI GCNNNNNNNGC 2 cut(s) 105, 133
BstNI CCWGG 4 cut(s) 47, 289, 365, 370
BstSCI CCNGG 7 cut(s) 45, 131, 246, 247, 287, 363, 368
BstSFI CTRYAG 1 cut(s) 265
BstUI CGCG 2 cut(s) 177, 305
BstV1I GCAGC 2 cut(s) 181, 279
BstZI CGGCCG 2 cut(s) 555, 815
Bsu15I ATCGAT 1 cut(s) 411
BsuRI GGCC 8 cut(s) 50, 252, 368, 553, 557, 635, 745, 817
BsuTUI ATCGAT 1 cut(s) 411
BtgI CCRYGG 1 cut(s) 61
BtgZI GCGATG 1 cut(s) 187
BtrI CACGTC 1 cut(s) 55
BtsCI GGATG 6 cut(s) 114, 339, 454, 541, 598, 658
BtsI GCAGTG 1 cut(s) 214
BtsIMutI CAGTG 1 cut(s) 214
Cac8I GCNNGC 4 cut(s) 129, 351, 555, 559
CciI TCATGA 1 cut(s) 478
CfoI GCGC 6 cut(s) 138, 174, 179, 305, 363, 563
Cfr10I RCCGGY 2 cut(s) 553, 557
Cfr13I GGNCC 4 cut(s) 49, 250, 551, 743
Cfr9I CCCGGG 1 cut(s) 247
ClaI ATCGAT 1 cut(s) 411
CseI GACGC 3 cut(s) 31, 322, 329
Csp6I GTAC 1 cut(s) 714
CviAII CATG 5 cut(s) 148, 187, 256, 479, 607
CviQI GTAC 1 cut(s) 714
DdeI CTNAG 1 cut(s) 293
DinI GGCGCC 2 cut(s) 137, 562
DpnI GATC 5 cut(s) 311, 374, 401, 410, 422
DpnII GATC 5 cut(s) 309, 372, 399, 408, 420
DraI TTTAAA 2 cut(s) 508, 805
DraIII CACNNNGTG 1 cut(s) 390
DrdI GACNNNNNNGTC 1 cut(s) 227
DseDI GACNNNNNNGTC 1 cut(s) 227
EaeI YGGCCR 2 cut(s) 555, 815
EagI CGGCCG 2 cut(s) 555, 815
Eam1104I CTCTTC 1 cut(s) 185
EarI CTCTTC 1 cut(s) 185
EciI GGCGGA 1 cut(s) 200
Ecl136II GAGCTC 2 cut(s) 195, 604
EclXI CGGCCG 2 cut(s) 555, 815
Eco130I CCWWGG 1 cut(s) 746
Eco147I AGGCCT 1 cut(s) 368
Eco24I GRGCYC 3 cut(s) 197, 443, 606
Eco52I CGGCCG 2 cut(s) 555, 815
Eco53kI GAGCTC 2 cut(s) 195, 604
Eco88I CYCGRG 2 cut(s) 161, 247
EcoICRI GAGCTC 2 cut(s) 195, 604
EcoNI CCTNNNNNAGG 1 cut(s) 161
EcoO109I RGGNCCY 1 cut(s) 743
EcoRII CCWGG 4 cut(s) 45, 287, 363, 368
EcoT14I CCWWGG 1 cut(s) 746
EcoT22I ATGCAT 1 cut(s) 724
EcoT38I GRGCYC 3 cut(s) 197, 443, 606
EgeI GGCGCC 2 cut(s) 137, 562
EheI GGCGCC 2 cut(s) 137, 562
ErhI CCWWGG 1 cut(s) 746
FaeI CATG 5 cut(s) 151, 190, 259, 482, 610
FaiI YATR 9 cut(s) 149, 188, 257, 446, 456, 480, 608, 693, 739
FaqI GGGAC 1 cut(s) 795
FatI CATG 5 cut(s) 147, 186, 255, 478, 606
FauI CCCGC 1 cut(s) 790
FbaI TGATCA 1 cut(s) 399
FblI GTMKAC 2 cut(s) 57, 318
Fnu4HI GCNGC 5 cut(s) 109, 170, 175, 268, 285
FokI GGATG 6 cut(s) 101, 326, 461, 548, 605, 665
FriOI GRGCYC 3 cut(s) 197, 443, 606
FseI GGCCGGCC 1 cut(s) 557
Fsp4HI GCNGC 5 cut(s) 109, 170, 175, 268, 285
FspBI CTAG 1 cut(s) 314
GlaI GCGC 6 cut(s) 137, 173, 178, 304, 362, 562
GluI GCNGC 5 cut(s) 109, 170, 175, 268, 285
GsaI CCCAGC 1 cut(s) 434
HaeII RGCGCY 3 cut(s) 139, 175, 564
HaeIII GGCC 8 cut(s) 50, 252, 368, 553, 557, 635, 745, 817
HapII CCGG 5 cut(s) 96, 132, 248, 554, 558
HgaI GACGC 3 cut(s) 31, 322, 329
HhaI GCGC 6 cut(s) 138, 174, 179, 305, 363, 563
Hin1I GRCGYC 4 cut(s) 136, 321, 333, 561
Hin1II CATG 5 cut(s) 151, 190, 259, 482, 610
Hin6I GCGC 6 cut(s) 136, 172, 177, 303, 361, 561
HinP1I GCGC 6 cut(s) 136, 172, 177, 303, 361, 561
HincII GTYRAC 2 cut(s) 58, 319
HindII GTYRAC 2 cut(s) 58, 319
HinfI GANTC 3 cut(s) 2, 152, 242
HpaII CCGG 5 cut(s) 96, 132, 248, 554, 558
HphI GGTGA 3 cut(s) 175, 223, 409
Hpy166II GTNNAC 3 cut(s) 58, 319, 337
Hpy188I TCNGA 2 cut(s) 32, 103
Hpy188III TCNNGA 2 cut(s) 376, 479
Hpy8I GTNNAC 3 cut(s) 58, 319, 337
Hpy99I CGWCG 5 cut(s) 59, 302, 323, 329, 569
HpyAV CCTTC 3 cut(s) 616, 724, 781
HpyCH4III ACNGT 1 cut(s) 235
HpyCH4IV ACGT 1 cut(s) 54
HpyCH4V TGCA 3 cut(s) 267, 722, 727
HpyF10VI GCNNNNNNNGC 2 cut(s) 105, 133
HpyF3I CTNAG 1 cut(s) 293
HpySE526I ACGT 1 cut(s) 54
Hsp92I GRCGYC 4 cut(s) 136, 321, 333, 561
Hsp92II CATG 5 cut(s) 151, 190, 259, 482, 610
HspAI GCGC 6 cut(s) 136, 172, 177, 303, 361, 561
KasI GGCGCC 2 cut(s) 135, 560
KroI GCCGGC 2 cut(s) 553, 557
KroNI GCCGGC 2 cut(s) 555, 559
Ksp22I TGATCA 1 cut(s) 399
Kzo9I GATC 5 cut(s) 309, 372, 399, 408, 420
LguI GCTCTTC 1 cut(s) 185
LmnI GCTCC 5 cut(s) 33, 104, 166, 200, 601
Lsp1109I GCAGC 2 cut(s) 181, 279
LweI GCATC 3 cut(s) 120, 439, 526
MaeI CTAG 1 cut(s) 314
MaeII ACGT 1 cut(s) 54
MaeIII GTNAC 1 cut(s) 229
MalI GATC 5 cut(s) 311, 374, 401, 410, 422
MboI GATC 5 cut(s) 309, 372, 399, 408, 420
MboII GAAGA 4 cut(s) 202, 481, 781, 784
MhlI GDGCHC 3 cut(s) 197, 443, 606
MluCI AATT 2 cut(s) 677, 701
Mly113I GGCGCC 2 cut(s) 136, 561
MlyI GAGTC 2 cut(s) 146, 236
MmeI TCCRAC 1 cut(s) 126
Mph1103I ATGCAT 1 cut(s) 724
MroNI GCCGGC 2 cut(s) 553, 557
MseI TTAA 4 cut(s) 486, 507, 756, 804
MslI CAYNNNNRTG 1 cut(s) 185
MspA1I CMGCKG 1 cut(s) 108
MspI CCGG 5 cut(s) 96, 132, 248, 554, 558
MspR9I CCNGG 7 cut(s) 47, 133, 248, 249, 289, 365, 370
MteI GCGCNGCGC 1 cut(s) 175
MvaI CCWGG 4 cut(s) 47, 289, 365, 370
MvnI CGCG 2 cut(s) 177, 305
MwoI GCNNNNNNNGC 2 cut(s) 105, 133
NaeI GCCGGC 2 cut(s) 555, 559
NarI GGCGCC 2 cut(s) 136, 561
NciI CCSGG 3 cut(s) 133, 248, 249
NdeII GATC 5 cut(s) 309, 372, 399, 408, 420
NgoMIV GCCGGC 2 cut(s) 553, 557
NlaIII CATG 5 cut(s) 151, 190, 259, 482, 610
NlaIV GGNNCC 5 cut(s) 100, 137, 552, 562, 744
NmeAIII GCCGAG 3 cut(s) 451, 709, 793
NmuCI GTSAC 1 cut(s) 229
NsiI ATGCAT 1 cut(s) 724
PaeR7I CTCGAG 1 cut(s) 161
PagI TCATGA 1 cut(s) 478
PceI AGGCCT 1 cut(s) 368
PciSI GCTCTTC 1 cut(s) 185
PcsI WCGNNNNNNNCGW 1 cut(s) 324
PdiI GCCGGC 2 cut(s) 555, 559
PfeI GAWTC 1 cut(s) 2
PflFI GACNNNGTC 1 cut(s) 323
PkrI GCNGC 5 cut(s) 110, 171, 176, 269, 286
PleI GAGTC 2 cut(s) 146, 236
PluTI GGCGCC 2 cut(s) 139, 564
PpsI GAGTC 2 cut(s) 146, 236
Psp124BI GAGCTC 2 cut(s) 197, 606
Psp6I CCWGG 4 cut(s) 45, 287, 363, 368
PspFI CCCAGC 1 cut(s) 430
PspGI CCWGG 4 cut(s) 45, 287, 363, 368
PspN4I GGNNCC 5 cut(s) 100, 137, 552, 562, 744
PspPI GGNCC 4 cut(s) 49, 250, 551, 743
PspXI VCTCGAGB 1 cut(s) 161
PstI CTGCAG 1 cut(s) 269
PsyI GACNNNGTC 1 cut(s) 323
RigI GGCCGGCC 1 cut(s) 557
RsaI GTAC 1 cut(s) 715
RsaNI GTAC 1 cut(s) 714
RseI CAYNNNNRTG 1 cut(s) 185
SacI GAGCTC 2 cut(s) 197, 606
SalI GTCGAC 2 cut(s) 56, 317
SapI GCTCTTC 1 cut(s) 185
SaqAI TTAA 4 cut(s) 486, 507, 756, 804
SatI GCNGC 5 cut(s) 109, 170, 175, 268, 285
Sau3AI GATC 5 cut(s) 309, 372, 399, 408, 420
Sau96I GGNCC 4 cut(s) 49, 250, 551, 743
ScaI AGTACT 1 cut(s) 715
SchI GAGTC 2 cut(s) 146, 236
ScrFI CCNGG 7 cut(s) 47, 133, 248, 249, 289, 365, 370
SduI GDGCHC 3 cut(s) 197, 443, 606
SfaNI GCATC 3 cut(s) 120, 439, 526
SfcI CTRYAG 1 cut(s) 265
SfoI GGCGCC 2 cut(s) 137, 562
Sfr274I CTCGAG 1 cut(s) 161
SlaI CTCGAG 1 cut(s) 161
SmaI CCCGGG 1 cut(s) 249
SmiMI CAYNNNNRTG 1 cut(s) 185
SmlI CTYRAG 1 cut(s) 161
SmoI CTYRAG 1 cut(s) 161
Sse9I AATT 2 cut(s) 677, 701
SseBI AGGCCT 1 cut(s) 368
SsiI CCGC 7 cut(s) 108, 142, 175, 211, 282, 285, 797
SspDI GGCGCC 2 cut(s) 135, 560
SspMI CTAG 1 cut(s) 314
SstI GAGCTC 2 cut(s) 197, 606
StuI AGGCCT 1 cut(s) 368
StyD4I CCNGG 7 cut(s) 45, 131, 246, 247, 287, 363, 368
StyI CCWWGG 1 cut(s) 746
TaaI ACNGT 1 cut(s) 235
TaiI ACGT 1 cut(s) 57
TaqI TCGA 7 cut(s) 57, 162, 240, 318, 327, 375, 411
TasI AATT 2 cut(s) 677, 701
TatI WGTACW 1 cut(s) 713
TauI GCSGC 3 cut(s) 111, 177, 287
TfiI GAWTC 1 cut(s) 2
Tru1I TTAA 4 cut(s) 486, 507, 756, 804
Tru9I TTAA 4 cut(s) 486, 507, 756, 804
TscAI CASTG 1 cut(s) 221
TseFI GTSAC 1 cut(s) 229
TseI GCWGC 2 cut(s) 169, 267
Tsp45I GTSAC 1 cut(s) 229
TspDTI ATGAA 2 cut(s) 203, 467
TspGWI ACGGA 1 cut(s) 217
TspMI CCCGGG 1 cut(s) 247
TspRI CASTG 1 cut(s) 221
Tth111I GACNNNGTC 1 cut(s) 323
XagI CCTNNNNNAGG 1 cut(s) 161
XapI RAATTY 1 cut(s) 701
XhoI CTCGAG 1 cut(s) 161
XmaI CCCGGG 1 cut(s) 247
XmiI GTMKAC 2 cut(s) 57, 318
XspI CTAG 1 cut(s) 314
ZrmI AGTACT 1 cut(s) 715
Zsp2I ATGCAT 1 cut(s) 724
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.