Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0002828

Physical Location & Seq

Genomic Coordinates Forward (+)

19122932 .. 19125078

Gene Structure 2147 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G015390.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2034 bp

ATGGACTTCTGCAGCGAAGTCTCCACCGCCGCCAGGCTCAGCGACGGTGCGTTGATCCTAGTCGACGCCGTCGAGGGCGCCTGGATCGAGAAGCTCAAGCCGTGCTTGGTGATCACCAAGATCGATAGGTTGATCGCCGAGCTGGGAATGAGCCCTATGGATGCGTATGTAAAGTTGTTGAAGATTGTTCATGAGGTTAATAACATTGTTAGTGCTTTTAAATCTGTGAAATACTTGAACGATGTGGATGCCATTCTTTCGGGGCCAGCCGGCGCCGACGACGACAAGGGCAATGTGGCCTTTGTGTGTGCGTTGGATGATTGGGGGTTTAGTATTAGGCAGTTTGCCGAGTTTTATGGGGCGAAATTCGGGTGGAGTACTAATGCATTGCAGAAGGCTTTATGGGGGCCTTGGTATTTTAATCACAAGGAGAAGAAGATTGTGGGACAGAAGGGTGTGGCGGGTTTGAAAAAGGCTCGACCTATGTTTGTTGAGTTTGTGCTTGAGCCGGTTTGGAGTGAGGCTGAAGTGATGGTTAAGAAGGTGATTAAAACGTTTAATTTGACTATACCACCTCGGGACTTGAAGGGTGACCTGAAGGGATTACGGCTACTGAACAGGGCAGACCCTTTTGTAGAGGTCACGTTTTCTGCTAGAGGAGAACATGTTCTGTCTGCTGCAGGAGAAGTACATCTTGAAAGATGCATAAAAGATTTGAAGGATAGATTTGCAAGGGTAGGCTTGGAAGTGTCTAAGCCTCTTGTGTCTTTTAAAGAGACCATTTTGGGAGATGAATCCACACTTGAGAACTTAAAATCCTTTCTTGCCAGTTCAGAATATGTTGAGAAAGTGACACAAAATGGAAGGTGTGTTGTTTGGGTGAAGGTCCTGAAGCTCCCACTTTCTCTAACTAAGGTGATTGATGAAAGTTCTGATATTCTAGCAGATATCCTTGGAGGCAAGGCTGCCCAGACGGGAGAGACCAATAAAAGTTTAAACACACAGGTTGCAAGCGCTGTAGAGGATGCGAATCCAATTGAAACACTAAGGAAACGTATGATGGAAGCTGTGGAAAGTGATATTTTGTCTAGTGGTGAGACTGACAAGGATCGGGCTGAGAGATGTAAAGTCCAGTGGCAAAAACTTCTTAAAAGGATCTGGGCACTTGGCCCTTGGCATATTGGCCCTAACATCCTACTTGCGCCAGAAATGAAAGGAAAGAGTACTGACTCCTCTGTGCTCATCCGCGGCTCCTCTCATGTTTCTGAGAAATTAGGATTGGTGGATGCTTCTAACAATGACAATGACAATGCAGCTGCTGACACATCTTCAGAAGTAACTGAAGCATTGTATGCTGAAGCAGAGCGCCTTCAGAGCAGCGTTTTATCTGGGTTTCAACTGGCAACAGCAGCTGGACCTTTATGTGACGAGCCTATGTGGGGTTTAGCATTTGTGGTTGAAGCTTACATTTCACCATTAGCTGCTCAGTCTGATGAGTTAGAAACCTCCCACCAGCAACCTGAGCAATATGGTATCTTCACAGGACAGGTAATGACAGCCGTTAAAGATGCTTGTAGAGCAGCTGTGCTTCAAAAGAAACCACGGCTTGTGGAAGCGATGTACTTTTGTGAGTTGATCATGCCAACTGAACAATTGGGTAATATGTATGCTGTGCTTGGACGAAGGCAGACAAAAGTTTTAAAGGAGGAAATGCAGGAAGGCTCCGCATTGTTCACTGTACATGCCTATGTGCCGGTTTCTGAAAGCTTTGGTTTTGCGGATGAGCTTAGAAGATGGACTGCTGGAGCTGCAAGTGCTCTTCTTGTGCTTAGCCACTGGGAAGCACTTGATAAGGATCCCTTCCTTGTACCAAAAACGGATGAGGAAAAAGAGGAGTTTGGTGATGGTTCTAGTGTGCCTCCAAATACAGCAAGAAAACTGATAAATGCTGTAAGACGGCAGAAGGGTCTTCCAGTGGAGGAAAAAGTAGTGCAGCACGCGACAAAGCAGAGGAGCTTGGCTCGTAAAGTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

EFG_C EFG_II GTP_EFTU GTP_EFTU_D2

Protein Analysis

677

Amino Acids

74.62

Weight (kDa)

5.72

Isoelectric Point (pI)

32.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
EFL1	PF25118	299 - 400	2.1e-08	Elongation factor-like GTPase 1-like domain
EFG_C	PF00679	535 - 620	2.3e-15	Elongation factor G C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002828)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22980 AT3G22980 AT3G22980
fragaria_vesca	FvH4_3g14510 FvH4_4g04790 FvH4_4g04800 FvH4_4g04801 FvH4_5g27362 FvH4_6g08980
malus_domestica	MD10G1213300.v1.1
prunus_persica	Prupe.4G129900_v2.0.a1
pyrus_communis	pycom05g21320 pycom05g21330 pycom05g23810 pycom10g18000
rosa_chinensis	RchiOBHm_Chr6g0274771
rosa_laevigata	RLG00000018664 RLG00000032745
rosa_multiflora	Rmu_co8270721.1_g000001 Rmu_co8337679.1_g000001 Rmu_sc0001938.1_g000004 Rmu_sc0006223.1_g000002 Rmu_sc0014273.1_g000001 Rmu_ssc0000027.1_g000001
rosa_roxburghii	Rroxscaffold_1G00055330 Rroxscaffold_2G00121910 Rroxscaffold_2G00121920 Rroxscaffold_7G00193950
rosa_rugosa	Rorug06G0084300
rosa_samantha	Rh2AG294600 Rh2DG318500 Rh2DG318700 Rh5DG169500 Rh6AG200200 Rh6BG203700 Rh6CG203900 Rh6DG195300
rosa_wichuraiana	Rw5G015390 Rw6G017390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	77, 272
AccI	GTMKAC	1 cut(s)	63
AccII	CGCG	2 cut(s)	1248, 2000
AciI	CCGC	7 cut(s)	27, 30, 461, 1246, 1248, 1725, 1778
AclI	AACGTT	1 cut(s)	554
AclWI	GGATC	6 cut(s)	49, 92, 1116, 1163, 1850, 1863
AcsI	RAATTY	1 cut(s)	365
AcuI	CTGAAG	7 cut(s)	546, 617, 911, 1314, 1355, 1362, 1377
AcyI	GRCGYC	3 cut(s)	66, 78, 273
AfaI	GTAC	6 cut(s)	379, 690, 1225, 1622, 1740, 1869
AfeI	AGCGCT	1 cut(s)	1015
AfiI	CCNNNNNNNGG	2 cut(s)	33, 1439
AflIII	ACRYGT	1 cut(s)	664
AjnI	CCWGG	2 cut(s)	32, 80
AjuI	GAANNNNNNNTTGG	2 cut(s)	1262, 1294
AloI	GAACNNNNNNTCC	4 cut(s)	651, 683, 800, 832
Alw21I	GWGCWC	2 cut(s)	1242, 1819
Alw26I	GTCTC	4 cut(s)	25, 770, 974, 1091
AlwI	GGATC	6 cut(s)	49, 92, 1116, 1163, 1850, 1863
AlwNI	CAGNNNCTG	2 cut(s)	1319, 1412
Ama87I	CYCGRG	1 cut(s)	576
Aor51HI	AGCGCT	1 cut(s)	1015
AoxI	GGCC	5 cut(s)	263, 297, 407, 1168, 1183
ApoI	RAATTY	1 cut(s)	365
Asp700I	GAANNNNTTC	1 cut(s)	666
AspLEI	GCGC	5 cut(s)	80, 275, 1016, 1204, 1368
AspS9I	GGNCC	6 cut(s)	263, 407, 886, 1169, 1184, 1415
AsuHPI	GGTGA	9 cut(s)	106, 121, 556, 602, 892, 928, 1106, 1464, 1913
AvaI	CYCGRG	1 cut(s)	576
AvaII	GGWCC	2 cut(s)	886, 1415
BaeGI	GKGCMC	1 cut(s)	1165
BamHI	GGATCC	1 cut(s)	1855
BanI	GGYRCC	2 cut(s)	77, 272
BanII	GRGCYC	1 cut(s)	155
BbsI	GAAGAC	1 cut(s)	1961
Bbv12I	GWGCWC	2 cut(s)	1242, 1819
BccI	CCATC	4 cut(s)	526, 1054, 1788, 1898
BceAI	ACGGC	6 cut(s)	53, 85, 623, 1544, 1619, 1973
BcgI	CGANNNNNNTGC	2 cut(s)	230, 264
BciT130I	CCWGG	2 cut(s)	34, 82
BclI	TGATCA	2 cut(s)	111, 1635
BcoDI	GTCTC	4 cut(s)	25, 770, 974, 1091
BfaI	CTAG	5 cut(s)	59, 654, 941, 1089, 1911
BfmI	CTRYAG	3 cut(s)	10, 678, 1017
BfoI	RGCGCY	4 cut(s)	81, 276, 1017, 1369
BlpI	GCTNAGC	2 cut(s)	38, 1829
BmcAI	AGTACT	2 cut(s)	379, 1225
Bme1390I	CCNGG	2 cut(s)	34, 82
Bme18I	GGWCC	2 cut(s)	886, 1415
BmeT110I	CYCGRG	1 cut(s)	576
BmgT120I	GGNCC	6 cut(s)	263, 407, 886, 1169, 1184, 1415
BmiI	GGNNCC	7 cut(s)	79, 264, 274, 408, 1252, 1723, 1857
BmrFI	CCNGG	2 cut(s)	34, 82
BmrI	ACTGGG	1 cut(s)	1846
BmsI	GCATC	6 cut(s)	151, 238, 692, 1015, 1276, 1558
BmuI	ACTGGG	1 cut(s)	1846
BpiI	GAAGAC	1 cut(s)	1961
BplI	GAGNNNNNCTC	1 cut(s)	2005
BpmI	CTGGAG	1 cut(s)	1824
Bpu10I	CCTNAGC	1 cut(s)	1521
Bpu1102I	GCTNAGC	2 cut(s)	38, 1829
BpuEI	CTTGAG	3 cut(s)	80, 524, 824
Bsa29I	ATCGAT	1 cut(s)	123
BsaBI	GATNNNNATC	2 cut(s)	1029, 1854
BsaHI	GRCGYC	3 cut(s)	66, 78, 273
BsaI	GGTCTC	2 cut(s)	770, 974
BsaJI	CCNNGG	6 cut(s)	410, 575, 952, 1172, 1246, 1601
BsaXI	ACNNNNNCTCC	2 cut(s)	651, 681
Bsc4I	CCNNNNNNNGG	2 cut(s)	33, 1439
Bse118I	RCCGGY	3 cut(s)	269, 508, 1753
Bse1I	ACTGG	5 cut(s)	828, 1132, 1404, 1841, 1973
Bse3DI	GCAATG	2 cut(s)	298, 386
Bse8I	GATNNNNATC	2 cut(s)	1029, 1854
BseBI	CCWGG	2 cut(s)	34, 82
BseCI	ATCGAT	1 cut(s)	123
BseDI	CCNNGG	6 cut(s)	410, 575, 952, 1172, 1246, 1601
BseGI	GGATG	9 cut(s)	166, 253, 322, 1030, 1191, 1242, 1291, 1786, 1885
BseJI	GATNNNNATC	2 cut(s)	1029, 1854
BseLI	CCNNNNNNNGG	2 cut(s)	33, 1439
BseMI	GCAATG	2 cut(s)	298, 386
BseMII	CTCAG	5 cut(s)	52, 1107, 1257, 1499, 1512
BseNI	ACTGG	5 cut(s)	828, 1132, 1404, 1841, 1973
BseRI	GAGGAG	5 cut(s)	672, 1222, 1243, 1907, 2026
BseSI	GKGCMC	1 cut(s)	1165
BseYI	CCCAGC	1 cut(s)	142
BsgI	GTGCAG	1 cut(s)	2012
Bsh1236I	CGCG	2 cut(s)	1248, 2000
BshFI	GGCC	5 cut(s)	265, 299, 409, 1170, 1185
BshNI	GGYRCC	2 cut(s)	77, 272
BshVI	ATCGAT	1 cut(s)	123
BsiHKAI	GWGCWC	2 cut(s)	1242, 1819
BsiHKCI	CYCGRG	1 cut(s)	576
BsiSI	CCGG	3 cut(s)	270, 509, 1754
BslFI	GGGAC	2 cut(s)	459, 593
BslI	CCNNNNNNNGG	2 cut(s)	33, 1439
BsmAI	GTCTC	4 cut(s)	25, 770, 974, 1091
BsmFI	GGGAC	2 cut(s)	459, 593
BsnI	GGCC	5 cut(s)	265, 299, 409, 1170, 1185
Bso31I	GGTCTC	2 cut(s)	770, 974
BsoBI	CYCGRG	1 cut(s)	576
Bsp1286I	GDGCHC	4 cut(s)	155, 1165, 1242, 1819
Bsp1407I	TGTACA	1 cut(s)	1738
Bsp143I	GATC	9 cut(s)	54, 84, 111, 120, 132, 1108, 1155, 1635, 1855
Bsp1720I	GCTNAGC	2 cut(s)	38, 1829
BspACI	CCGC	7 cut(s)	27, 30, 461, 1246, 1248, 1725, 1778
BspANI	GGCC	5 cut(s)	265, 299, 409, 1170, 1185
BspCNI	CTCAG	5 cut(s)	51, 1108, 1258, 1498, 1513
BspDI	ATCGAT	1 cut(s)	123
BspFNI	CGCG	2 cut(s)	1248, 2000
BspHI	TCATGA	1 cut(s)	190
BspLI	GGNNCC	7 cut(s)	79, 264, 274, 408, 1252, 1723, 1857
BspMAI	CTGCAG	2 cut(s)	14, 682
BspPI	GGATC	6 cut(s)	49, 92, 1116, 1163, 1850, 1863
BspQI	GCTCTTC	1 cut(s)	1824
BspT107I	GGYRCC	2 cut(s)	77, 272
BspTNI	GGTCTC	2 cut(s)	770, 974
BsrDI	GCAATG	2 cut(s)	298, 386
BsrFI	RCCGGY	3 cut(s)	269, 508, 1753
BsrGI	TGTACA	1 cut(s)	1738
BsrI	ACTGG	5 cut(s)	828, 1132, 1404, 1841, 1973
BssAI	RCCGGY	3 cut(s)	269, 508, 1753
BssECI	CCNNGG	6 cut(s)	410, 575, 952, 1172, 1246, 1601
BssMI	GATC	9 cut(s)	54, 84, 111, 120, 132, 1108, 1155, 1635, 1855
BssNI	GRCGYC	3 cut(s)	66, 78, 273
BssT1I	CCWWGG	3 cut(s)	410, 952, 1172
Bst2UI	CCWGG	2 cut(s)	34, 82
Bst4CI	ACNGT	2 cut(s)	47, 1738
Bst6I	CTCTTC	1 cut(s)	1824
BstACI	GRCGYC	3 cut(s)	66, 78, 273
BstAPI	GCANNNNNTGC	1 cut(s)	1352
BstAUI	TGTACA	1 cut(s)	1738
BstC8I	GCNNGC	4 cut(s)	267, 271, 1012, 1998
BstDSI	CCRYGG	2 cut(s)	1246, 1601
BstEII	GGTNACC	1 cut(s)	590
BstF5I	GGATG	9 cut(s)	166, 253, 322, 1030, 1191, 1242, 1291, 1786, 1885
BstFNI	CGCG	2 cut(s)	1248, 2000
BstH2I	RGCGCY	4 cut(s)	81, 276, 1017, 1369
BstHHI	GCGC	5 cut(s)	80, 275, 1016, 1204, 1368
BstKTI	GATC	9 cut(s)	57, 87, 114, 123, 135, 1111, 1158, 1638, 1858
BstMAI	GTCTC	4 cut(s)	25, 770, 974, 1091
BstMBI	GATC	9 cut(s)	54, 84, 111, 120, 132, 1108, 1155, 1635, 1855
BstMWI	GCNNNNNNNGC	7 cut(s)	1352, 1374, 1409, 1522, 1577, 1808, 1814
BstNI	CCWGG	2 cut(s)	34, 82
BstNSI	RCATGY	2 cut(s)	668, 1745
BstPI	GGTNACC	1 cut(s)	590
BstSCI	CCNGG	2 cut(s)	32, 80
BstSFI	CTRYAG	3 cut(s)	10, 678, 1017
BstSLI	GKGCMC	1 cut(s)	1165
BstUI	CGCG	2 cut(s)	1248, 2000
BstV2I	GAAGAC	1 cut(s)	1961
BstX2I	RGATCY	2 cut(s)	1155, 1855
BstYI	RGATCY	2 cut(s)	1155, 1855
Bsu15I	ATCGAT	1 cut(s)	123
BsuRI	GGCC	5 cut(s)	265, 299, 409, 1170, 1185
BsuTUI	ATCGAT	1 cut(s)	123
BtgI	CCRYGG	2 cut(s)	1246, 1601
BtgZI	GCGATG	1 cut(s)	1631
BtsCI	GGATG	9 cut(s)	166, 253, 322, 1030, 1191, 1242, 1291, 1786, 1885
BtsIMutI	CAGTG	4 cut(s)	1139, 1734, 1834, 1980
Cac8I	GCNNGC	4 cut(s)	267, 271, 1012, 1998
CaiI	CAGNNNCTG	2 cut(s)	1319, 1412
CciI	TCATGA	1 cut(s)	190
CfoI	GCGC	5 cut(s)	80, 275, 1016, 1204, 1368
Cfr10I	RCCGGY	3 cut(s)	269, 508, 1753
Cfr13I	GGNCC	6 cut(s)	263, 407, 886, 1169, 1184, 1415
Cfr42I	CCGCGG	1 cut(s)	1249
ClaI	ATCGAT	1 cut(s)	123
CseI	GACGC	1 cut(s)	74
Csp6I	GTAC	6 cut(s)	378, 689, 1224, 1621, 1739, 1868
CviAII	CATG	5 cut(s)	191, 665, 1259, 1639, 1742
CviQI	GTAC	6 cut(s)	378, 689, 1224, 1621, 1739, 1868
DinI	GGCGCC	2 cut(s)	79, 274
DpnI	GATC	9 cut(s)	56, 86, 113, 122, 134, 1110, 1157, 1637, 1857
DpnII	GATC	9 cut(s)	54, 84, 111, 120, 132, 1108, 1155, 1635, 1855
DraI	TTTAAA	4 cut(s)	220, 772, 996, 1701
Eam1104I	CTCTTC	1 cut(s)	1824
EarI	CTCTTC	1 cut(s)	1824
Eco130I	CCWWGG	3 cut(s)	410, 952, 1172
Eco24I	GRGCYC	1 cut(s)	155
Eco31I	GGTCTC	2 cut(s)	770, 974
Eco32I	GATATC	1 cut(s)	949
Eco47I	GGWCC	2 cut(s)	886, 1415
Eco47III	AGCGCT	1 cut(s)	1015
Eco57I	CTGAAG	7 cut(s)	546, 617, 911, 1314, 1355, 1362, 1377
Eco88I	CYCGRG	1 cut(s)	576
Eco91I	GGTNACC	1 cut(s)	590
EcoO109I	RGGNCCY	2 cut(s)	407, 886
EcoO65I	GGTNACC	1 cut(s)	590
EcoRII	CCWGG	2 cut(s)	32, 80
EcoRV	GATATC	1 cut(s)	949
EcoT14I	CCWWGG	3 cut(s)	410, 952, 1172
EcoT22I	ATGCAT	2 cut(s)	388, 707
EcoT38I	GRGCYC	1 cut(s)	155
EgeI	GGCGCC	2 cut(s)	79, 274
EheI	GGCGCC	2 cut(s)	79, 274
ErhI	CCWWGG	3 cut(s)	410, 952, 1172
FaeI	CATG	5 cut(s)	194, 668, 1262, 1642, 1745
FalI	AAGNNNNNCTT	6 cut(s)	89, 121, 678, 710, 1844, 1876
FaqI	GGGAC	2 cut(s)	459, 593
FatI	CATG	5 cut(s)	190, 664, 1258, 1638, 1741
FauI	CCCGC	1 cut(s)	454
FbaI	TGATCA	2 cut(s)	111, 1635
FblI	GTMKAC	1 cut(s)	63
FokI	GGATG	9 cut(s)	173, 260, 329, 1037, 1178, 1229, 1298, 1793, 1892
FriOI	GRGCYC	1 cut(s)	155
FspBI	CTAG	5 cut(s)	59, 654, 941, 1089, 1911
GlaI	GCGC	5 cut(s)	79, 274, 1015, 1203, 1367
GsaI	CCCAGC	1 cut(s)	146
GsuI	CTGGAG	1 cut(s)	1824
HaeII	RGCGCY	4 cut(s)	81, 276, 1017, 1369
HaeIII	GGCC	5 cut(s)	265, 299, 409, 1170, 1185
HapII	CCGG	3 cut(s)	270, 509, 1754
HgaI	GACGC	1 cut(s)	74
HhaI	GCGC	5 cut(s)	80, 275, 1016, 1204, 1368
Hin1I	GRCGYC	3 cut(s)	66, 78, 273
Hin1II	CATG	5 cut(s)	194, 668, 1262, 1642, 1745
Hin6I	GCGC	5 cut(s)	78, 273, 1014, 1202, 1366
HinP1I	GCGC	5 cut(s)	78, 273, 1014, 1202, 1366
HincII	GTYRAC	1 cut(s)	64
HindII	GTYRAC	1 cut(s)	64
HindIII	AAGCTT	2 cut(s)	1461, 1765
HinfI	GANTC	3 cut(s)	794, 1030, 1229
HpaII	CCGG	3 cut(s)	270, 509, 1754
HphI	GGTGA	9 cut(s)	106, 121, 556, 602, 892, 928, 1106, 1464, 1913
Hpy166II	GTNNAC	2 cut(s)	64, 1734
Hpy188I	TCNGA	7 cut(s)	835, 934, 1267, 1333, 1374, 1492, 1762
Hpy188III	TCNNGA	5 cut(s)	88, 191, 578, 695, 889
Hpy8I	GTNNAC	2 cut(s)	64, 1734
Hpy99I	CGWCG	5 cut(s)	47, 68, 74, 281, 284
HpyCH4III	ACNGT	2 cut(s)	47, 1738
HpyCH4IV	ACGT	3 cut(s)	554, 644, 1054
HpyF10VI	GCNNNNNNNGC	7 cut(s)	1352, 1374, 1409, 1522, 1577, 1808, 1814
HpySE526I	ACGT	3 cut(s)	554, 644, 1054
Hsp92I	GRCGYC	3 cut(s)	66, 78, 273
Hsp92II	CATG	5 cut(s)	194, 668, 1262, 1642, 1745
HspAI	GCGC	5 cut(s)	78, 273, 1014, 1202, 1366
KasI	GGCGCC	2 cut(s)	77, 272
KroI	GCCGGC	1 cut(s)	269
KroNI	GCCGGC	1 cut(s)	271
Ksp22I	TGATCA	2 cut(s)	111, 1635
KspI	CCGCGG	1 cut(s)	1249
Kzo9I	GATC	9 cut(s)	54, 84, 111, 120, 132, 1108, 1155, 1635, 1855
LguI	GCTCTTC	1 cut(s)	1824
LmnI	GCTCC	5 cut(s)	900, 1256, 1727, 1805, 2013
LweI	GCATC	6 cut(s)	151, 238, 692, 1015, 1276, 1558
MaeI	CTAG	5 cut(s)	59, 654, 941, 1089, 1911
MaeII	ACGT	3 cut(s)	554, 644, 1054
MaeIII	GTNAC	5 cut(s)	590, 640, 850, 1336, 1424
MalI	GATC	9 cut(s)	56, 86, 113, 122, 134, 1110, 1157, 1637, 1857
MboI	GATC	9 cut(s)	54, 84, 111, 120, 132, 1108, 1155, 1635, 1855
MboII	GAAGA	8 cut(s)	193, 445, 448, 1320, 1528, 1803, 1811, 1961
MfeI	CAATTG	2 cut(s)	1035, 1652
MflI	RGATCY	2 cut(s)	1155, 1855
MhlI	GDGCHC	4 cut(s)	155, 1165, 1242, 1819
MluCI	AATT	5 cut(s)	365, 559, 1035, 1271, 1652
Mly113I	GGCGCC	2 cut(s)	78, 273
MlyI	GAGTC	1 cut(s)	1223
MmeI	TCCRAC	1 cut(s)	294
Mph1103I	ATGCAT	2 cut(s)	388, 707
MroNI	GCCGGC	1 cut(s)	269
MroXI	GAANNNNTTC	1 cut(s)	666
MslI	CAYNNNNRTG	1 cut(s)	1746
MspA1I	CMGCKG	4 cut(s)	1248, 1316, 1412, 1583
MspI	CCGG	3 cut(s)	270, 509, 1754
MspR9I	CCNGG	2 cut(s)	34, 82
MssI	GTTTAAAC	1 cut(s)	996
MunI	CAATTG	2 cut(s)	1035, 1652
MvaI	CCWGG	2 cut(s)	34, 82
MvnI	CGCG	2 cut(s)	1248, 2000
MwoI	GCNNNNNNNGC	7 cut(s)	1352, 1374, 1409, 1522, 1577, 1808, 1814
NaeI	GCCGGC	1 cut(s)	271
NarI	GGCGCC	2 cut(s)	78, 273
NdeII	GATC	9 cut(s)	54, 84, 111, 120, 132, 1108, 1155, 1635, 1855
NgoMIV	GCCGGC	1 cut(s)	269
NlaIII	CATG	5 cut(s)	194, 668, 1262, 1642, 1745
NlaIV	GGNNCC	7 cut(s)	79, 264, 274, 408, 1252, 1723, 1857
NmeAIII	GCCGAG	2 cut(s)	163, 373
NmuCI	GTSAC	4 cut(s)	590, 640, 850, 1424
NsiI	ATGCAT	2 cut(s)	388, 707
NspI	RCATGY	2 cut(s)	668, 1745
PagI	TCATGA	1 cut(s)	190
PciI	ACATGT	1 cut(s)	664
PciSI	GCTCTTC	1 cut(s)	1824
PcsI	WCGNNNNNNNCGW	1 cut(s)	69
PdiI	GCCGGC	1 cut(s)	271
PdmI	GAANNNNTTC	1 cut(s)	666
PfeI	GAWTC	2 cut(s)	794, 1030
PflFI	GACNNNGTC	1 cut(s)	68
PleI	GAGTC	1 cut(s)	1223
PluTI	GGCGCC	2 cut(s)	81, 276
PmeI	GTTTAAAC	1 cut(s)	996
PpsI	GAGTC	1 cut(s)	1223
PpuMI	RGGWCCY	1 cut(s)	886
PscI	ACATGT	1 cut(s)	664
Psp1406I	AACGTT	1 cut(s)	554
Psp5II	RGGWCCY	1 cut(s)	886
Psp6I	CCWGG	2 cut(s)	32, 80
PspEI	GGTNACC	1 cut(s)	590
PspFI	CCCAGC	1 cut(s)	142
PspGI	CCWGG	2 cut(s)	32, 80
PspN4I	GGNNCC	7 cut(s)	79, 264, 274, 408, 1252, 1723, 1857
PspPI	GGNCC	6 cut(s)	263, 407, 886, 1169, 1184, 1415
PspPPI	RGGWCCY	1 cut(s)	886
PstI	CTGCAG	2 cut(s)	14, 682
PstNI	CAGNNNCTG	2 cut(s)	1319, 1412
PsuI	RGATCY	2 cut(s)	1155, 1855
PsyI	GACNNNGTC	1 cut(s)	68
PvuII	CAGCTG	3 cut(s)	1316, 1412, 1583
RsaI	GTAC	6 cut(s)	379, 690, 1225, 1622, 1740, 1869
RsaNI	GTAC	6 cut(s)	378, 689, 1224, 1621, 1739, 1868
RseI	CAYNNNNRTG	1 cut(s)	1746
SacII	CCGCGG	1 cut(s)	1249
SalI	GTCGAC	1 cut(s)	62
SapI	GCTCTTC	1 cut(s)	1824
Sau3AI	GATC	9 cut(s)	54, 84, 111, 120, 132, 1108, 1155, 1635, 1855
Sau96I	GGNCC	6 cut(s)	263, 407, 886, 1169, 1184, 1415
ScaI	AGTACT	2 cut(s)	379, 1225
SchI	GAGTC	1 cut(s)	1223
ScrFI	CCNGG	2 cut(s)	34, 82
SduI	GDGCHC	4 cut(s)	155, 1165, 1242, 1819
SfaNI	GCATC	6 cut(s)	151, 238, 692, 1015, 1276, 1558
SfcI	CTRYAG	3 cut(s)	10, 678, 1017
SfoI	GGCGCC	2 cut(s)	79, 274
Sfr303I	CCGCGG	1 cut(s)	1249
SgrBI	CCGCGG	1 cut(s)	1249
SinI	GGWCC	2 cut(s)	886, 1415
SmiMI	CAYNNNNRTG	1 cut(s)	1746
SmlI	CTYRAG	3 cut(s)	95, 503, 803
SmoI	CTYRAG	3 cut(s)	95, 503, 803
Sse9I	AATT	5 cut(s)	365, 559, 1035, 1271, 1652
SsiI	CCGC	7 cut(s)	27, 30, 461, 1246, 1248, 1725, 1778
SspDI	GGCGCC	2 cut(s)	77, 272
SspMI	CTAG	5 cut(s)	59, 654, 941, 1089, 1911
StyD4I	CCNGG	2 cut(s)	32, 80
StyI	CCWWGG	3 cut(s)	410, 952, 1172
TaaI	ACNGT	2 cut(s)	47, 1738
TaiI	ACGT	3 cut(s)	557, 647, 1057
TaqI	TCGA	5 cut(s)	63, 72, 87, 123, 478
TasI	AATT	5 cut(s)	365, 559, 1035, 1271, 1652
TatI	WGTACW	5 cut(s)	377, 688, 1223, 1620, 1738
TauI	GCSGC	2 cut(s)	32, 1251
TfiI	GAWTC	2 cut(s)	794, 1030
TscAI	CASTG	4 cut(s)	1139, 1741, 1841, 1980
TseFI	GTSAC	4 cut(s)	590, 640, 850, 1424
Tsp45I	GTSAC	4 cut(s)	590, 640, 850, 1424
TspDTI	ATGAA	4 cut(s)	179, 807, 939, 1226
TspGWI	ACGGA	1 cut(s)	1892
TspRI	CASTG	4 cut(s)	1139, 1741, 1841, 1980
Tth111I	GACNNNGTC	1 cut(s)	68
VpaK11BI	GGWCC	2 cut(s)	886, 1415
XapI	RAATTY	1 cut(s)	365
XceI	RCATGY	2 cut(s)	668, 1745
XmiI	GTMKAC	1 cut(s)	63
XmnI	GAANNNNTTC	1 cut(s)	666
XspI	CTAG	5 cut(s)	59, 654, 941, 1089, 1911
ZrmI	AGTACT	2 cut(s)	379, 1225
Zsp2I	ATGCAT	2 cut(s)	388, 707

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.