transposition, RNA-mediated
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 221 |
| Acc16I | TGCGCA | 1 cut(s) | 70 |
| AcsI | RAATTY | 1 cut(s) | 45 |
| AfaI | GTAC | 2 cut(s) | 94, 245 |
| AluBI | AGCT | 1 cut(s) | 41 |
| AluI | AGCT | 1 cut(s) | 41 |
| Alw26I | GTCTC | 2 cut(s) | 122, 253 |
| ApoI | RAATTY | 1 cut(s) | 45 |
| AspLEI | GCGC | 2 cut(s) | 71, 188 |
| AspS9I | GGNCC | 1 cut(s) | 138 |
| AvaII | GGWCC | 1 cut(s) | 138 |
| BccI | CCATC | 2 cut(s) | 140, 170 |
| BcoDI | GTCTC | 2 cut(s) | 122, 253 |
| BfoI | RGCGCY | 1 cut(s) | 189 |
| Bme18I | GGWCC | 1 cut(s) | 138 |
| BmgT120I | GGNCC | 1 cut(s) | 138 |
| BmiI | GGNNCC | 1 cut(s) | 139 |
| BmrI | ACTGGG | 1 cut(s) | 249 |
| BmuI | ACTGGG | 1 cut(s) | 249 |
| Bse1I | ACTGG | 2 cut(s) | 244, 283 |
| BseMII | CTCAG | 1 cut(s) | 129 |
| BseNI | ACTGG | 2 cut(s) | 244, 283 |
| BslFI | GGGAC | 1 cut(s) | 151 |
| BsmAI | GTCTC | 2 cut(s) | 122, 253 |
| BsmBI | CGTCTC | 1 cut(s) | 253 |
| BsmFI | GGGAC | 1 cut(s) | 151 |
| Bsp143I | GATC | 1 cut(s) | 265 |
| BspCNI | CTCAG | 1 cut(s) | 128 |
| BspLI | GGNNCC | 1 cut(s) | 139 |
| BsrI | ACTGG | 2 cut(s) | 244, 283 |
| BssMI | GATC | 1 cut(s) | 265 |
| Bst6I | CTCTTC | 1 cut(s) | 21 |
| BstDEI | CTNAG | 5 cut(s) | 56, 82, 115, 124, 315 |
| BstH2I | RGCGCY | 1 cut(s) | 189 |
| BstHHI | GCGC | 2 cut(s) | 71, 188 |
| BstKTI | GATC | 1 cut(s) | 268 |
| BstMAI | GTCTC | 2 cut(s) | 122, 253 |
| BstMBI | GATC | 1 cut(s) | 265 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 68 |
| BtsIMutI | CAGTG | 1 cut(s) | 123 |
| CfoI | GCGC | 2 cut(s) | 71, 188 |
| Cfr13I | GGNCC | 1 cut(s) | 138 |
| Csp6I | GTAC | 2 cut(s) | 93, 244 |
| CviJI | RGCY | 2 cut(s) | 41, 86 |
| CviKI_1 | RGCY | 2 cut(s) | 41, 86 |
| CviQI | GTAC | 2 cut(s) | 93, 244 |
| DdeI | CTNAG | 5 cut(s) | 56, 82, 115, 124, 315 |
| DpnI | GATC | 1 cut(s) | 267 |
| DpnII | GATC | 1 cut(s) | 265 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 221 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 221 |
| Eam1104I | CTCTTC | 1 cut(s) | 21 |
| EarI | CTCTTC | 1 cut(s) | 21 |
| Eco32I | GATATC | 1 cut(s) | 312 |
| Eco47I | GGWCC | 1 cut(s) | 138 |
| EcoRV | GATATC | 1 cut(s) | 312 |
| Esp3I | CGTCTC | 1 cut(s) | 253 |
| FaiI | YATR | 4 cut(s) | 67, 79, 261, 285 |
| FaqI | GGGAC | 1 cut(s) | 151 |
| FspAI | RTGCGCAY | 1 cut(s) | 70 |
| FspI | TGCGCA | 1 cut(s) | 70 |
| GlaI | GCGC | 2 cut(s) | 70, 187 |
| HaeII | RGCGCY | 1 cut(s) | 189 |
| HhaI | GCGC | 2 cut(s) | 71, 188 |
| Hin6I | GCGC | 2 cut(s) | 69, 186 |
| HinP1I | GCGC | 2 cut(s) | 69, 186 |
| Hpy166II | GTNNAC | 1 cut(s) | 121 |
| Hpy188I | TCNGA | 1 cut(s) | 253 |
| Hpy8I | GTNNAC | 1 cut(s) | 121 |
| HpyCH4IV | ACGT | 2 cut(s) | 216, 246 |
| HpyCH4V | TGCA | 3 cut(s) | 10, 62, 155 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 68 |
| HpyF3I | CTNAG | 5 cut(s) | 56, 82, 115, 124, 315 |
| HpySE526I | ACGT | 2 cut(s) | 216, 246 |
| HspAI | GCGC | 2 cut(s) | 69, 186 |
| Kzo9I | GATC | 1 cut(s) | 265 |
| LmnI | GCTCC | 1 cut(s) | 38 |
| LpnPI | CCDG | 3 cut(s) | 114, 225, 264 |
| MaeII | ACGT | 2 cut(s) | 216, 246 |
| MalI | GATC | 1 cut(s) | 267 |
| MboI | GATC | 1 cut(s) | 265 |
| MboII | GAAGA | 1 cut(s) | 38 |
| MluCI | AATT | 3 cut(s) | 45, 150, 288 |
| MnlI | CCTC | 2 cut(s) | 22, 128 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 68 |
| NdeII | GATC | 1 cut(s) | 265 |
| NlaIV | GGNNCC | 1 cut(s) | 139 |
| NsbI | TGCGCA | 1 cut(s) | 70 |
| PspN4I | GGNNCC | 1 cut(s) | 139 |
| PspPI | GGNCC | 1 cut(s) | 138 |
| RsaI | GTAC | 2 cut(s) | 94, 245 |
| RsaNI | GTAC | 2 cut(s) | 93, 244 |
| Sau3AI | GATC | 1 cut(s) | 265 |
| Sau96I | GGNCC | 1 cut(s) | 138 |
| SetI | ASST | 4 cut(s) | 33, 43, 219, 249 |
| SgeI | CNNG | 6 cut(s) | 29, 108, 113, 144, 252, 291 |
| SinI | GGWCC | 1 cut(s) | 138 |
| Sse9I | AATT | 3 cut(s) | 45, 150, 288 |
| TaiI | ACGT | 2 cut(s) | 219, 249 |
| TaqI | TCGA | 1 cut(s) | 97 |
| TasI | AATT | 3 cut(s) | 45, 150, 288 |
| TatI | WGTACW | 1 cut(s) | 92 |
| TscAI | CASTG | 1 cut(s) | 123 |
| TspDTI | ATGAA | 1 cut(s) | 39 |
| TspRI | CASTG | 1 cut(s) | 123 |
| VpaK11BI | GGWCC | 1 cut(s) | 138 |
| XapI | RAATTY | 1 cut(s) | 45 |