Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000907.1

Orthogroup ID

OG0003161

Physical Location & Seq

Genomic Coordinates Forward (+)

41247 .. 46424

Gene Structure 5178 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1680 bp

atgggggtgaagggtgtgaatcaaggccatggggctgttgtgcctccaacagagcagaagctctcggatgagatggatgttacaaagaagaagtatcttagaggtggagaagctaatttcgaggtattgaaagataaaaagttgaagggtcaactagctgttagagaagcattacatctgaaaacagcacaagctgctgccaacgctgagaagtaccttctgccaagtgaagaaggttatttggagcctgaaggcttagagaagacatggaggatcaaacaagactcaatagcccctgcagtagatatcttaagcgcaaggaatcaatacgatattgttgtcccagatctcggtccatacaggctggatttcacgccaagtggtcgatacatgatggtcggtggacacaagggccatctagctattgtagacatgaaacaaatgagcctgatcaaagaatttcagatgggtgaacatgacagtaatccgttctgtgaacagttttctgaatgtgcagttgggtcattggttagggagacagttcgtgatgtggtattcttgcatgatgaaacgatgtttgctgcagcccagaaaaagtacccatatatttataatcgggatggcactgaacttcactgcttaaaggaacatggtgcagctttaaggcttcgttatcttgaacaacaccgactattggcatcaataaatgaatatggtcagcttcattatcaggatgtaacagatggtcggatgataggtagttacaggacaggctttggtcgtactgatgtgatgcaggtaaaccgccacaatgcacttcttgctttgggtcattcaggtggtaaagttaccatgtggagtcctacaagctcttctgctgttattgagatgctgtgccacaagggccccatctcggccatagctttccaccctactaatcgtgatctcatggccacatctgggaaagagaaaaaagttaagctttgggacatgaggaatcttaaggggccagtccaaatgttaccaggtcaggcagagactctggatttcagtcaaaagggtctgcttgctcgtggaactggatcttttctacaggttctgagagattcttctgggactcagaagtacgagaaatatatgactcatccattagttaaaggttaccaaatagaaaaggtgttgtttcgaccatatgaagatgttttatgcataggacactccatggggtggtctagtattctgattcctggttctgggaaccccaattttgatacatgggtggcgaatccatttgaaacacctaaacagagaagagagagggaagtgcactctctacttgataagctcccacctgagacaattatgtttgatcccacaaagattggcacagtgaaacctccaaggaaagagaagccaacaaaggaggagaaagaggctgagctggaagccgctcttgaagttgccaaggacattgtcccgaagaagaaaacaaaggggaggagtaagccaagtaagatgaagaagaagaagcaggagataattgccaatgccaagagacctttcttggaacaacaaatgaaagaggatgaacaaatggctagaaagaagcagaaaggaatggagcaagtggagctaccaacatctttgcagcggtttgctcgcaagaaagtgactatatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000462 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005732 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0030490 GO:0030515 GO:0030684 GO:0030686 GO:0032040 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0043170 GO:0044085 GO:0044237 GO:0044238 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BING4CT WD40

Protein Analysis

559

Amino Acids

63.13

Weight (kDa)

9.31

Isoelectric Point (pI)

33.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_Prp19	PF24814	179 - 354	4.8e-11	Prp19 WD40 domain
Beta-prop_WDR5	PF25175	181 - 334	4e-06	WDR5 beta-propeller domain
WD40_CDC20-Fz	PF24807	190 - 409	1.1e-11	CDC20/Fizzy WD40 domain
Beta-prop_THOC3	PF25174	192 - 402	1.4e-12	THOC3 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	246 - 336	1.7e-08	WDR3 first beta-propeller domain
BING4CT	PF08149	378 - 457	2.7e-33	BING4CT (NUC141) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003161)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10530
fragaria_vesca	FvH4_7g06900 FvH4_7g06900
malus_domestica	MD07G1075700.v1.1 MD13G1165600.v1.1
prunus_persica	Prupe.2G096600_v2.0.a1 Prupe.2G096600_v2.0.a1
pyrus_communis	pycom02g20600 pycom07g05980 pycom13g14170
rosa_chinensis	RchiOBHm_Chr1g0336741 RchiOBHm_Chr1g0336801 RchiOBHm_Chr1g0336811 RchiOBHm_Chr1g0336821
rosa_laevigata	RLG00000029332 RLG00000029335 RLG00000029337
rosa_multiflora	Rmu_sc0000907.1_g000012 Rmu_sc0000907.1_g000017 Rmu_sc0000907.1_g000032 Rmu_sc0000907.1_g000033 Rmu_sc0011778.1_g000010
rosa_roxburghii	Rroxscaffold_4G00315350
rosa_rugosa	Rorug01G0127500 Rorug01G0127800 Rorug01G0127900
rosa_samantha	Rh1AG148700 Rh1AG148900 Rh1BG116800 Rh1BG116900 Rh1CG140100 Rh1DG155500 Rh1DG156000 Rh1DG156100 Rh5AG191600
rosa_wichuraiana	Rw1G012000 Rw1G012010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	612
Acc36I	ACCTGC	1 cut(s)	787
AccB7I	CCANNNNNTGG	1 cut(s)	1227
AccBSI	CCGCTC	1 cut(s)	1451
AccI	GTMKAC	1 cut(s)	429
AciI	CCGC	3 cut(s)	805, 1449, 1651
AclWI	GGATC	3 cut(s)	281, 1090, 1364
AcoI	YGGCCR	2 cut(s)	915, 951
AcsI	RAATTY	1 cut(s)	458
AcuI	CTGAAG	1 cut(s)	270
AfaI	GTAC	4 cut(s)	215, 599, 784, 1127
AfiI	CCNNNNNNNGG	6 cut(s)	350, 694, 913, 960, 1227, 1253
AflII	CTTAAG	2 cut(s)	310, 1001
AgsI	TTSAA	5 cut(s)	130, 145, 680, 1295, 1457
AjnI	CCWGG	2 cut(s)	1024, 1246
AjuI	GAANNNNNNNTTGG	4 cut(s)	501, 533, 1544, 1576
Alw21I	GWGCWC	1 cut(s)	1329
Alw26I	GTCTC	4 cut(s)	530, 1031, 1349, 1549
Alw44I	GTGCAC	1 cut(s)	1325
AlwI	GGATC	3 cut(s)	281, 1090, 1364
AlwNI	CAGNNNCTG	1 cut(s)	1099
AoxI	GGCC	6 cut(s)	25, 412, 904, 915, 951, 1007
ApaI	GGGCCC	1 cut(s)	908
ApaLI	GTGCAC	1 cut(s)	1325
ApeKI	GCWGC	6 cut(s)	194, 197, 581, 584, 656, 1648
ApoI	RAATTY	1 cut(s)	458
AspLEI	GCGC	1 cut(s)	317
AspS9I	GGNCC	5 cut(s)	353, 412, 904, 905, 1007
AsuHPI	GGTGA	2 cut(s)	19, 482
AvaII	GGWCC	1 cut(s)	353
BaeGI	GKGCMC	2 cut(s)	908, 1329
BaeI	ACNNNNGTAYC	2 cut(s)	1263, 1296
BalI	TGGCCA	1 cut(s)	953
BanII	GRGCYC	1 cut(s)	908
BauI	CACGAG	1 cut(s)	1071
BbsI	GAAGAC	1 cut(s)	269
Bbv12I	GWGCWC	1 cut(s)	1329
BbvI	GCAGC	6 cut(s)	181, 184, 568, 596, 668, 1660
BccI	CCATC	7 cut(s)	67, 388, 423, 460, 614, 737, 917
BciT130I	CCWGG	2 cut(s)	1026, 1248
BclI	TGATCA	1 cut(s)	450
BcoDI	GTCTC	4 cut(s)	530, 1031, 1349, 1549
BfaI	CTAG	4 cut(s)	155, 419, 1233, 1599
BfmI	CTRYAG	3 cut(s)	297, 582, 1091
BfrI	CTTAAG	2 cut(s)	310, 1001
BfuAI	ACCTGC	1 cut(s)	787
BglI	GCCNNNNNGGC	1 cut(s)	903
BglII	AGATCT	1 cut(s)	346
BisI	GCNGC	7 cut(s)	195, 198, 582, 585, 657, 1449, 1649
BlpI	GCTNAGC	1 cut(s)	1437
BlsI	GCNGC	7 cut(s)	196, 199, 583, 586, 658, 1450, 1650
Bme1390I	CCNGG	2 cut(s)	1026, 1248
Bme18I	GGWCC	1 cut(s)	353
BmgT120I	GGNCC	5 cut(s)	353, 412, 904, 905, 1007
BmiI	GGNNCC	5 cut(s)	246, 906, 907, 1008, 1259
BmrFI	CCNGG	2 cut(s)	1026, 1248
BmsI	GCATC	3 cut(s)	707, 783, 879
BpiI	GAAGAC	1 cut(s)	269
Bpu1102I	GCTNAGC	1 cut(s)	1437
BsaI	GGTCTC	1 cut(s)	1549
BsaJI	CCNNGG	4 cut(s)	28, 1221, 1400, 1464
Bsc4I	CCNNNNNNNGG	6 cut(s)	350, 694, 913, 960, 1227, 1253
Bse1I	ACTGG	2 cut(s)	1010, 1084
BseBI	CCWGG	2 cut(s)	1026, 1248
BseDI	CCNNGG	4 cut(s)	28, 1221, 1400, 1464
BseGI	GGATG	7 cut(s)	73, 82, 625, 739, 756, 1144, 1591
BseLI	CCNNNNNNNGG	6 cut(s)	350, 694, 913, 960, 1227, 1253
BseMII	CTCAG	5 cut(s)	198, 1091, 1133, 1344, 1428
BseNI	ACTGG	2 cut(s)	1010, 1084
BseRI	GAGGAG	2 cut(s)	1439, 1513
BseSI	GKGCMC	2 cut(s)	908, 1329
BseXI	GCAGC	6 cut(s)	181, 184, 568, 596, 668, 1660
BsgI	GTGCAG	2 cut(s)	534, 675
BshFI	GGCC	6 cut(s)	27, 414, 906, 917, 953, 1009
BsiHKAI	GWGCWC	1 cut(s)	1329
BslFI	GGGAC	4 cut(s)	326, 1001, 1129, 1460
BslI	CCNNNNNNNGG	6 cut(s)	350, 694, 913, 960, 1227, 1253
BsmAI	GTCTC	4 cut(s)	530, 1031, 1349, 1549
BsmFI	GGGAC	4 cut(s)	326, 1001, 1129, 1460
BsnI	GGCC	6 cut(s)	27, 414, 906, 917, 953, 1009
Bso31I	GGTCTC	1 cut(s)	1549
Bsp120I	GGGCCC	1 cut(s)	904
Bsp1286I	GDGCHC	2 cut(s)	908, 1329
Bsp143I	GATC	6 cut(s)	273, 346, 450, 943, 1082, 1369
Bsp1720I	GCTNAGC	1 cut(s)	1437
Bsp19I	CCATGG	2 cut(s)	28, 1221
BspACI	CCGC	3 cut(s)	805, 1449, 1651
BspANI	GGCC	6 cut(s)	27, 414, 906, 917, 953, 1009
BspCNI	CTCAG	5 cut(s)	199, 1092, 1132, 1345, 1429
BspLI	GGNNCC	5 cut(s)	246, 906, 907, 1008, 1259
BspMAI	CTGCAG	2 cut(s)	301, 586
BspMI	ACCTGC	1 cut(s)	787
BspPI	GGATC	3 cut(s)	281, 1090, 1364
BspQI	GCTCTTC	1 cut(s)	877
BspTI	CTTAAG	2 cut(s)	310, 1001
BspTNI	GGTCTC	1 cut(s)	1549
BsrBI	CCGCTC	1 cut(s)	1451
BsrI	ACTGG	2 cut(s)	1010, 1084
BssECI	CCNNGG	4 cut(s)	28, 1221, 1400, 1464
BssMI	GATC	6 cut(s)	273, 346, 450, 943, 1082, 1369
BssSI	CACGAG	1 cut(s)	1071
BssT1I	CCWWGG	4 cut(s)	28, 1221, 1400, 1464
Bst2BI	CACGAG	1 cut(s)	1071
Bst2UI	CCWGG	2 cut(s)	1026, 1248
Bst4CI	ACNGT	4 cut(s)	482, 501, 541, 1390
Bst6I	CTCTTC	2 cut(s)	877, 1306
BstAFI	CTTAAG	2 cut(s)	310, 1001
BstAPI	GCANNNNNTGC	2 cut(s)	194, 821
BstC8I	GCNNGC	2 cut(s)	1068, 1660
BstDEI	CTNAG	7 cut(s)	98, 207, 256, 1100, 1119, 1353, 1437
BstDSI	CCRYGG	2 cut(s)	28, 1221
BstEII	GGTNACC	1 cut(s)	1160
BstF5I	GGATG	7 cut(s)	73, 82, 625, 739, 756, 1144, 1591
BstHHI	GCGC	1 cut(s)	317
BstKTI	GATC	6 cut(s)	276, 349, 453, 946, 1085, 1372
BstMAI	GTCTC	4 cut(s)	530, 1031, 1349, 1549
BstMBI	GATC	6 cut(s)	273, 346, 450, 943, 1082, 1369
BstMWI	GCNNNNNNNGC	5 cut(s)	194, 203, 821, 903, 1630
BstNI	CCWGG	2 cut(s)	1026, 1248
BstPI	GGTNACC	1 cut(s)	1160
BstSCI	CCNGG	2 cut(s)	1024, 1246
BstSFI	CTRYAG	3 cut(s)	297, 582, 1091
BstSLI	GKGCMC	2 cut(s)	908, 1329
BstV1I	GCAGC	6 cut(s)	181, 184, 568, 596, 668, 1660
BstV2I	GAAGAC	1 cut(s)	269
BstX2I	RGATCY	2 cut(s)	346, 1082
BstYI	RGATCY	2 cut(s)	346, 1082
BsuRI	GGCC	6 cut(s)	27, 414, 906, 917, 953, 1009
BtgI	CCRYGG	2 cut(s)	28, 1221
BtsCI	GGATG	7 cut(s)	73, 82, 625, 739, 756, 1144, 1591
BtsI	GCAGTG	1 cut(s)	634
BtsIMutI	CAGTG	3 cut(s)	624, 634, 1395
BveI	ACCTGC	1 cut(s)	787
Cac8I	GCNNGC	2 cut(s)	1068, 1660
CaiI	CAGNNNCTG	1 cut(s)	1099
CfoI	GCGC	1 cut(s)	317
Cfr13I	GGNCC	5 cut(s)	353, 412, 904, 905, 1007
CsiI	ACCWGGT	1 cut(s)	1024
Csp6I	GTAC	4 cut(s)	214, 598, 783, 1126
CspCI	CAANNNNNGTGG	2 cut(s)	1363, 1398
CviQI	GTAC	4 cut(s)	214, 598, 783, 1126
DdeI	CTNAG	7 cut(s)	98, 207, 256, 1100, 1119, 1353, 1437
DpnI	GATC	6 cut(s)	275, 348, 452, 945, 1084, 1371
DpnII	GATC	6 cut(s)	273, 346, 450, 943, 1082, 1369
EaeI	YGGCCR	2 cut(s)	915, 951
Eam1104I	CTCTTC	2 cut(s)	877, 1306
EarI	CTCTTC	2 cut(s)	877, 1306
Eco130I	CCWWGG	4 cut(s)	28, 1221, 1400, 1464
Eco24I	GRGCYC	1 cut(s)	908
Eco31I	GGTCTC	1 cut(s)	1549
Eco32I	GATATC	1 cut(s)	307
Eco47I	GGWCC	1 cut(s)	353
Eco57I	CTGAAG	1 cut(s)	270
Eco91I	GGTNACC	1 cut(s)	1160
EcoO109I	RGGNCCY	2 cut(s)	904, 905
EcoO65I	GGTNACC	1 cut(s)	1160
EcoRII	CCWGG	2 cut(s)	1024, 1246
EcoRV	GATATC	1 cut(s)	307
EcoT14I	CCWWGG	4 cut(s)	28, 1221, 1400, 1464
EcoT22I	ATGCAT	1 cut(s)	1211
EcoT38I	GRGCYC	1 cut(s)	908
ErhI	CCWWGG	4 cut(s)	28, 1221, 1400, 1464
FalI	AAGNNNNNCTT	4 cut(s)	966, 998, 1437, 1469
FaqI	GGGAC	4 cut(s)	326, 1001, 1129, 1460
FauNDI	CATATG	1 cut(s)	1192
FbaI	TGATCA	1 cut(s)	450
FblI	GTMKAC	1 cut(s)	429
Fnu4HI	GCNGC	7 cut(s)	195, 198, 582, 585, 657, 1449, 1649
FokI	GGATG	7 cut(s)	80, 89, 632, 746, 763, 1131, 1598
FriOI	GRGCYC	1 cut(s)	908
Fsp4HI	GCNGC	7 cut(s)	195, 198, 582, 585, 657, 1449, 1649
FspBI	CTAG	4 cut(s)	155, 419, 1233, 1599
GlaI	GCGC	1 cut(s)	316
GluI	GCNGC	7 cut(s)	195, 198, 582, 585, 657, 1449, 1649
HaeIII	GGCC	6 cut(s)	27, 414, 906, 917, 953, 1009
HhaI	GCGC	1 cut(s)	317
Hin6I	GCGC	1 cut(s)	315
HinP1I	GCGC	1 cut(s)	315
HincII	GTYRAC	1 cut(s)	152
HindII	GTYRAC	1 cut(s)	152
HindIII	AAGCTT	1 cut(s)	980
HphI	GGTGA	2 cut(s)	19, 482
Hpy166II	GTNNAC	7 cut(s)	152, 404, 430, 473, 497, 802, 1327
Hpy188I	TCNGA	8 cut(s)	67, 180, 465, 508, 750, 1101, 1122, 1242
Hpy188III	TCNNGA	8 cut(s)	545, 617, 677, 731, 941, 1043, 1454, 1477
Hpy8I	GTNNAC	7 cut(s)	152, 404, 430, 473, 497, 802, 1327
HpyAV	CCTTC	5 cut(s)	4, 139, 227, 227, 245
HpyCH4III	ACNGT	4 cut(s)	482, 501, 541, 1390
HpyF10VI	GCNNNNNNNGC	5 cut(s)	194, 203, 821, 903, 1630
HpyF3I	CTNAG	7 cut(s)	98, 207, 256, 1100, 1119, 1353, 1437
HspAI	GCGC	1 cut(s)	315
Ksp22I	TGATCA	1 cut(s)	450
Kzo9I	GATC	6 cut(s)	273, 346, 450, 943, 1082, 1369
LguI	GCTCTTC	1 cut(s)	877
LmnI	GCTCC	4 cut(s)	244, 1350, 1621, 1630
Lsp1109I	GCAGC	6 cut(s)	181, 184, 568, 596, 668, 1660
LweI	GCATC	3 cut(s)	707, 783, 879
MabI	ACCWGGT	1 cut(s)	1024
MaeI	CTAG	4 cut(s)	155, 419, 1233, 1599
MaeIII	GTNAC	7 cut(s)	79, 736, 761, 847, 1020, 1160, 1669
MalI	GATC	6 cut(s)	275, 348, 452, 945, 1084, 1371
MbiI	CCGCTC	1 cut(s)	1451
MboI	GATC	6 cut(s)	273, 346, 450, 943, 1082, 1369
MflI	RGATCY	2 cut(s)	346, 1082
MhlI	GDGCHC	2 cut(s)	908, 1329
MlsI	TGGCCA	1 cut(s)	953
MluCI	AATT	5 cut(s)	115, 458, 1264, 1359, 1539
MluNI	TGGCCA	1 cut(s)	953
MlyI	GAGTC	5 cut(s)	278, 868, 1033, 1111, 1135
MmeI	TCCRAC	2 cut(s)	71, 728
Mox20I	TGGCCA	1 cut(s)	953
Mph1103I	ATGCAT	1 cut(s)	1211
MscI	TGGCCA	1 cut(s)	953
MseI	TTAA	6 cut(s)	311, 641, 662, 978, 1002, 1155
MslI	CAYNNNNRTG	1 cut(s)	837
Msp20I	TGGCCA	1 cut(s)	953
MspA1I	CMGCKG	1 cut(s)	1651
MspCI	CTTAAG	2 cut(s)	310, 1001
MspR9I	CCNGG	2 cut(s)	1026, 1248
MvaI	CCWGG	2 cut(s)	1026, 1248
MwoI	GCNNNNNNNGC	5 cut(s)	194, 203, 821, 903, 1630
NcoI	CCATGG	2 cut(s)	28, 1221
NdeI	CATATG	1 cut(s)	1192
NdeII	GATC	6 cut(s)	273, 346, 450, 943, 1082, 1369
NlaIV	GGNNCC	5 cut(s)	246, 906, 907, 1008, 1259
NmeAIII	GCCGAG	1 cut(s)	893
NmuCI	GTSAC	1 cut(s)	1669
NsiI	ATGCAT	1 cut(s)	1211
PciSI	GCTCTTC	1 cut(s)	877
PfeI	GAWTC	6 cut(s)	19, 322, 997, 1106, 1243, 1285
PflFI	GACNNNGTC	1 cut(s)	1472
PflMI	CCANNNNNTGG	1 cut(s)	1227
PkrI	GCNGC	7 cut(s)	196, 199, 583, 586, 658, 1450, 1650
PleI	GAGTC	5 cut(s)	278, 867, 1033, 1111, 1135
PpsI	GAGTC	5 cut(s)	278, 867, 1033, 1111, 1135
PsiI	TTATAA	1 cut(s)	612
Psp6I	CCWGG	2 cut(s)	1024, 1246
PspEI	GGTNACC	1 cut(s)	1160
PspGI	CCWGG	2 cut(s)	1024, 1246
PspN4I	GGNNCC	5 cut(s)	246, 906, 907, 1008, 1259
PspOMI	GGGCCC	1 cut(s)	904
PspPI	GGNCC	5 cut(s)	353, 412, 904, 905, 1007
PstI	CTGCAG	2 cut(s)	301, 586
PstNI	CAGNNNCTG	1 cut(s)	1099
PsuI	RGATCY	2 cut(s)	346, 1082
PsyI	GACNNNGTC	1 cut(s)	1472
RsaI	GTAC	4 cut(s)	215, 599, 784, 1127
RsaNI	GTAC	4 cut(s)	214, 598, 783, 1126
RseI	CAYNNNNRTG	1 cut(s)	837
SapI	GCTCTTC	1 cut(s)	877
SaqAI	TTAA	6 cut(s)	311, 641, 662, 978, 1002, 1155
SatI	GCNGC	7 cut(s)	195, 198, 582, 585, 657, 1449, 1649
Sau3AI	GATC	6 cut(s)	273, 346, 450, 943, 1082, 1369
Sau96I	GGNCC	5 cut(s)	353, 412, 904, 905, 1007
SchI	GAGTC	5 cut(s)	278, 868, 1033, 1111, 1135
ScrFI	CCNGG	2 cut(s)	1026, 1248
SduI	GDGCHC	2 cut(s)	908, 1329
SexAI	ACCWGGT	1 cut(s)	1024
SfaNI	GCATC	3 cut(s)	707, 783, 879
SfcI	CTRYAG	3 cut(s)	297, 582, 1091
SinI	GGWCC	1 cut(s)	353
SmiMI	CAYNNNNRTG	1 cut(s)	837
SmlI	CTYRAG	2 cut(s)	310, 1001
SmoI	CTYRAG	2 cut(s)	310, 1001
Sse9I	AATT	5 cut(s)	115, 458, 1264, 1359, 1539
SsiI	CCGC	3 cut(s)	805, 1449, 1651
SspMI	CTAG	4 cut(s)	155, 419, 1233, 1599
StyD4I	CCNGG	2 cut(s)	1024, 1246
StyI	CCWWGG	4 cut(s)	28, 1221, 1400, 1464
TaaI	ACNGT	4 cut(s)	482, 501, 541, 1390
TaqI	TCGA	3 cut(s)	120, 385, 1186
TaqII	GACCGA	1 cut(s)	341
TasI	AATT	5 cut(s)	115, 458, 1264, 1359, 1539
TauI	GCSGC	1 cut(s)	1451
TfiI	GAWTC	6 cut(s)	19, 322, 997, 1106, 1243, 1285
Tru1I	TTAA	6 cut(s)	311, 641, 662, 978, 1002, 1155
Tru9I	TTAA	6 cut(s)	311, 641, 662, 978, 1002, 1155
TscAI	CASTG	3 cut(s)	631, 641, 1395
TseFI	GTSAC	1 cut(s)	1669
TseI	GCWGC	6 cut(s)	194, 197, 581, 584, 656, 1648
Tsp45I	GTSAC	1 cut(s)	1669
TspDTI	ATGAA	8 cut(s)	449, 582, 713, 723, 1209, 1532, 1592, 1602
TspGWI	ACGGA	1 cut(s)	477
TspRI	CASTG	3 cut(s)	631, 641, 1395
Tth111I	GACNNNGTC	1 cut(s)	1472
Van91I	CCANNNNNTGG	1 cut(s)	1227
Vha464I	CTTAAG	2 cut(s)	310, 1001
VneI	GTGCAC	1 cut(s)	1325
VpaK11BI	GGWCC	1 cut(s)	353
XapI	RAATTY	1 cut(s)	458
XmiI	GTMKAC	1 cut(s)	429
XspI	CTAG	4 cut(s)	155, 419, 1233, 1599
Zsp2I	ATGCAT	1 cut(s)	1211

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.