Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003637.1

Orthogroup ID

OG0002582

Physical Location & Seq

Genomic Coordinates Reverse (-)

38931 .. 41435

Gene Structure 2505 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2505 bp

atggaaagcaacagggacaagaaggcaggcgagaagaaagaaaagaagacgatggaggcgaaaaagaaagtgccaaagcatgtgagggcaatgcaggaggcactggcgaagggaaaggaagaggaagagaggcagagaagtgaggaagaggagagactgaggagagaagaagaggagaggctgaggagacaagaggttgagagggaagcagaggaggccaggattaggagaaaggaaaagaaaaaggagatcatagagcacaagagaagggaaggcattcctgtaactgccaagcagaaacaagaagcagacaagttagagaggtatcgaaaacagataggggttccacctcctgttcctgccactgaggaggagaatgatcacaaagggccttccaaaagacccatgtatcatcacaagaacaagtgtatgaggacaaatcggaaaattcaagttgggcatgtagcggaggaaaaatcacttcaagttgtgaatgagtactctgtggaagagattagaatcgtagaagatggcaaaggaaatgaatgggatccctatagttgggaggatcaggcaccaatctctagcggcacagagaagctaagagaaactgaggttgaggttgacacgaagaaagatgctgttgtggaaggaccgagttcagtttctgctgttgaagagagtgaagaagagaactttctgcgttcgccaatttgctgcgttatggggcatgttgatgctggtaaaaccaagtttctggattgcatccgtggcacgaatgttcagaaaggtgaggctggtggtattactcagcagattggtgcaacttatcttcctgctgagaacatacaagagagaatcaaggagctgaaagctgctgatgataagcacatgaaggtaccgggtctgttgcttattgataccccagggcatgagccattcaccaagtttcggtcacggggttctggtttgtgtgacattgctgttttggttgttgacattatggatggcttaaagcctcagactatagagtcactcaatcttttgaagtcaaggaatactgaattcattgttgcattgaataaggtggacagactcaacgggtggaagccttgtccaaatgcaccaattatcaaggcaatgaagcagcaatctcaggatgtgaaaaatgagttcaatatgagagtcgtgcagattgccattcagttcaaggagcaggggattaatactaaattgaacgtcgatgagaacaaacggatgagggaaacatacagcattgtacctataagtgccaagagtggtgaaggcatcccagatttgttgtcactgatggtttattggacccagaaatctatgacagagaaactgacttacagcaatgaagtgcagtgtacagtgttggaggtcaagtatgttgaaggccttgggacaacaattgatgttatattggttaatggggtgcttcgccgtggagatcaaatagttgtttgtggtaaccatggtactcctattgttactaggattcaatctttgttgaccccagagccgatgaaagagcttcgtgtgaagggaaagtatcagcatcatagtgaaatcagagctgcgcaggctatcaagatcacatcaccacaggggtttgaacatgctattgctggcactgctctctatgtagtagggcctgacgatgacttggaagaggtcaaggaagcagctatggaagacatgatgaagtcagtcctcgtgaacaacaacaagaatggtagtactagtactgctggtgatggaggagtttgtgcacaagcatcaactctaggctctttggaagcaatgctagagtttctgaaggcccaagaagttaatattccagttcgtggaattggcataggccctatacagaaaaaggatgtcaggaaggccagtgtgatgctcggaaagaagatcttggcatttgatgtcaaagtgacaccggaggcccagaaacttgcagatgaattgggtgtgaagatttttgtcggtgatataatccatgaggtgattaaggcctacatgaaaaacctcaaggaggaaaaggagaaggagttagctgctgtggatgaggaatctgtctttccatgtgtgctcaagattttacccaactgtgttttcaacaagaaggatccaatcatagttggggttaaagttcttcaaggcattgtcaaggttgggactccactttgtattcctcagagggactttgtggttattgggcgcattgagtcgattgagaataaccataaacgtgttgatatggccaacaaggggaaggaagtttgcattaagattgttgggacgaatcctaatcagcagcaggtgatgtttggtaggcactttaacattgaagatgaacttgtcagccatatctcaaggaggtctattgatgtgctaaaatcatgctaccggaacgacctgtcgcaggtggagtggaagctggttttgaaattgaagactattttcaagatactgtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001882 GO:0001883 GO:0002181 GO:0002183 GO:0003674 GO:0003676 GO:0003723 GO:0003743 GO:0003824 GO:0003924 GO:0005488 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006412 GO:0006413 GO:0006518 GO:0006807 GO:0008135 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0019001 GO:0019538 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0032991 GO:0033290 GO:0034641 GO:0034645 GO:0035639 GO:0036094 GO:0043043 GO:0043167 GO:0043168 GO:0043170 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0070993 GO:0071704 GO:0097159 GO:0097367 GO:1901265 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko00195 ko01100 ko03013 map00195 map01100 map03013

Pfam Domains

Protein Families

GTP_EFTU GTP_EFTU_D2 IF-2

Protein Analysis

834

Amino Acids

93.96

Weight (kDa)

8.38

Isoelectric Point (pI)

41.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GTP_EFTU	PF00009	237 - 448	3.7e-33	Elongation factor Tu GTP binding domain
GTP_EFTU_D2	PF03144	476 - 521	3.3e-07	Elongation factor Tu domain 2
IF-2	PF11987	592 - 681	1.1e-16	Translation-initiation factor 2
GTP_EFTU_D4	PF14578	704 - 796	1.7e-17	Elongation factor Tu domain 4

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002582)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21160 AT1G76720 AT1G76720 AT1G76810 AT2G27700 AT2G27700
fragaria_vesca	FvH4_2g13940 FvH4_2g13940 FvH4_2g13940 FvH4_4g36100 FvH4_4g36312
malus_domestica	MD05G1023200.v1.1 MD09G1087100.v1.1 MD10G1024100.v1.1
prunus_persica	Prupe.2G099300_v2.0.a1 Prupe.8G027900_v2.0.a1
pyrus_communis	pycom05g01470 pycom09g01240 pycom10g01600
rosa_chinensis	RchiOBHm_Chr4g0445721 RchiOBHm_Chr6g0275701
rosa_laevigata	RLG00000005714 RLG00000013337 RLG00000013444
rosa_multiflora	Rmu_co8469881.1_g000001 Rmu_sc0003637.1_g000011 Rmu_sc0003637.1_g000012 Rmu_sc0007122.1_g000003
rosa_roxburghii	Rroxscaffold_7G00193000
rosa_rugosa	Rorug04G0365200 Rorug06G0095700
rosa_samantha	Rh4AG426100 Rh4CG453100 Rh4DG434300 Rh6AG207600 Rh6BG210300 Rh6CG214100 Rh6DG203400
rosa_wichuraiana	Rw4G036490 Rw6G018100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	2338, 2443
AasI	GACNNNNNNGTC	1 cut(s)	1030
Acc16I	TGCGCA	1 cut(s)	1605
Acc36I	ACCTGC	2 cut(s)	2338, 2443
Acc65I	GGTACC	1 cut(s)	898
AccB1I	GGYRCC	2 cut(s)	574, 898
AccB7I	CCANNNNNTGG	1 cut(s)	1871
AciI	CCGC	2 cut(s)	467, 588
AclWI	GGATC	5 cut(s)	545, 558, 576, 2150, 2163
AcoI	YGGCCR	1 cut(s)	2289
AcsI	RAATTY	2 cut(s)	447, 1064
AcuI	CTGAAG	1 cut(s)	1862
AfaI	GTAC	7 cut(s)	500, 900, 1281, 1393, 1504, 1765, 1771
AfiI	CCNNNNNNNGG	7 cut(s)	225, 561, 951, 1871, 2062, 2298, 2452
AflIII	ACRYGT	1 cut(s)	2278
AhlI	ACTAGT	1 cut(s)	1766
AjnI	CCWGG	2 cut(s)	218, 925
AjuI	GAANNNNNNNTTGG	2 cut(s)	2126, 2158
AluBI	AGCT	8 cut(s)	601, 868, 875, 1558, 1601, 1712, 2084, 2467
AluI	AGCT	8 cut(s)	601, 868, 875, 1558, 1601, 1712, 2084, 2467
Alw21I	GWGCWC	3 cut(s)	261, 1798, 2121
Alw26I	GTCTC	2 cut(s)	148, 181
Alw44I	GTGCAC	1 cut(s)	1794
AlwI	GGATC	5 cut(s)	545, 558, 576, 2150, 2163
AlwNI	CAGNNNCTG	1 cut(s)	668
ApaLI	GTGCAC	1 cut(s)	1794
ApeKI	GCWGC	7 cut(s)	717, 875, 1147, 1601, 1709, 2084, 2344
ApoI	RAATTY	2 cut(s)	447, 1064
AseI	ATTAAT	1 cut(s)	1224
Asp700I	GAANNNNTTC	1 cut(s)	276
Asp718I	GGTACC	1 cut(s)	898
AspLEI	GCGC	2 cut(s)	1606, 2250
AspS9I	GGNCC	7 cut(s)	389, 653, 1341, 1676, 1846, 1886, 1972
AsuC2I	CCSGG	1 cut(s)	903
AsuHPI	GGTGA	8 cut(s)	803, 934, 1313, 1617, 1790, 2027, 2044, 2362
AvaII	GGWCC	2 cut(s)	653, 1341
BaeGI	GKGCMC	1 cut(s)	1798
BaeI	ACNNNNGTAYC	2 cut(s)	392, 425
BalI	TGGCCA	1 cut(s)	2291
BamHI	GGATCC	2 cut(s)	550, 2155
BanI	GGYRCC	2 cut(s)	574, 898
BauI	CACGAG	1 cut(s)	1739
BbsI	GAAGAC	3 cut(s)	53, 1725, 2489
Bbv12I	GWGCWC	3 cut(s)	261, 1798, 2121
BbvCI	CCTCAGC	1 cut(s)	182
BbvI	GCAGC	7 cut(s)	704, 862, 1159, 1588, 1721, 2071, 2356
BccI	CCATC	5 cut(s)	46, 524, 1001, 1324, 1775
BceAI	ACGGC	1 cut(s)	1452
BciT130I	CCWGG	2 cut(s)	220, 927
BclI	TGATCA	1 cut(s)	379
BcnI	CCSGG	1 cut(s)	903
BcoDI	GTCTC	2 cut(s)	148, 181
BcuI	ACTAGT	1 cut(s)	1766
BfaI	CTAG	5 cut(s)	585, 1518, 1767, 1811, 1832
BfmI	CTRYAG	2 cut(s)	556, 1026
BfuAI	ACCTGC	2 cut(s)	2338, 2443
BglII	AGATCT	1 cut(s)	1938
BisI	GCNGC	8 cut(s)	589, 718, 876, 1148, 1602, 1710, 2085, 2345
BlsI	GCNGC	8 cut(s)	590, 719, 877, 1149, 1603, 1711, 2086, 2346
BmcAI	AGTACT	3 cut(s)	500, 1765, 1771
Bme1390I	CCNGG	3 cut(s)	220, 903, 927
Bme18I	GGWCC	2 cut(s)	653, 1341
BmgT120I	GGNCC	7 cut(s)	389, 653, 1341, 1676, 1846, 1886, 1972
BmiI	GGNNCC	6 cut(s)	345, 552, 576, 900, 1343, 2157
BmrFI	CCNGG	3 cut(s)	220, 903, 927
BmsI	GCATC	7 cut(s)	628, 727, 774, 1317, 1591, 1811, 1914
BpiI	GAAGAC	3 cut(s)	53, 1725, 2489
Bpu10I	CCTNAGC	1 cut(s)	182
BpuEI	CTTGAG	3 cut(s)	2042, 2105, 2386
BpuMI	CCSGG	1 cut(s)	903
BsaBI	GATNNNNATC	1 cut(s)	518
BsaJI	CCNNGG	6 cut(s)	769, 925, 926, 1423, 1468, 1498
BsaWI	WCCGGW	2 cut(s)	1966, 2436
BsaXI	ACNNNNNCTCC	4 cut(s)	1394, 1424, 2063, 2093
Bsc4I	CCNNNNNNNGG	7 cut(s)	225, 561, 951, 1871, 2062, 2298, 2452
Bse1I	ACTGG	3 cut(s)	108, 1865, 1917
Bse3DI	GCAATG	5 cut(s)	96, 978, 1146, 1384, 1833
Bse8I	GATNNNNATC	1 cut(s)	518
BseBI	CCWGG	2 cut(s)	220, 927
BseDI	CCNNGG	6 cut(s)	769, 925, 926, 1423, 1468, 1498
BseGI	GGATG	7 cut(s)	765, 1012, 1165, 1263, 1308, 1909, 2098
BseJI	GATNNNNATC	1 cut(s)	518
BseLI	CCNNNNNNNGG	7 cut(s)	225, 561, 951, 1871, 2062, 2298, 2452
BseMI	GCAATG	5 cut(s)	96, 978, 1146, 1384, 1833
BseMII	CTCAG	9 cut(s)	149, 173, 357, 603, 824, 831, 1034, 1169, 2237
BseNI	ACTGG	3 cut(s)	108, 1865, 1917
BseRI	GAGGAG	8 cut(s)	164, 175, 188, 199, 227, 383, 386, 1800
BseSI	GKGCMC	1 cut(s)	1798
BseXI	GCAGC	7 cut(s)	704, 862, 1159, 1588, 1721, 2071, 2356
BsgI	GTGCAG	2 cut(s)	1211, 1406
BshNI	GGYRCC	2 cut(s)	574, 898
BsiHKAI	GWGCWC	3 cut(s)	261, 1798, 2121
BsiSI	CCGG	3 cut(s)	902, 1967, 2437
BslFI	GGGAC	5 cut(s)	29, 1441, 2218, 2243, 2341
BslI	CCNNNNNNNGG	7 cut(s)	225, 561, 951, 1871, 2062, 2298, 2452
BsmAI	GTCTC	2 cut(s)	148, 181
BsmFI	GGGAC	5 cut(s)	29, 1441, 2218, 2243, 2341
BsmI	GAATGC	1 cut(s)	276
Bsp1286I	GDGCHC	3 cut(s)	261, 1798, 2121
Bsp1407I	TGTACA	1 cut(s)	1391
Bsp143I	GATC	8 cut(s)	249, 379, 550, 568, 1474, 1617, 1938, 2155
Bsp19I	CCATGG	1 cut(s)	1498
BspACI	CCGC	2 cut(s)	467, 588
BspCNI	CTCAG	9 cut(s)	150, 174, 358, 604, 823, 832, 1033, 1168, 2236
BspLI	GGNNCC	6 cut(s)	345, 552, 576, 900, 1343, 2157
BspMI	ACCTGC	2 cut(s)	2338, 2443
BspPI	GGATC	5 cut(s)	545, 558, 576, 2150, 2163
BspT107I	GGYRCC	2 cut(s)	574, 898
BsrDI	GCAATG	5 cut(s)	96, 978, 1146, 1384, 1833
BsrGI	TGTACA	1 cut(s)	1391
BsrI	ACTGG	3 cut(s)	108, 1865, 1917
BssECI	CCNNGG	6 cut(s)	769, 925, 926, 1423, 1468, 1498
BssMI	GATC	8 cut(s)	249, 379, 550, 568, 1474, 1617, 1938, 2155
BssSI	CACGAG	1 cut(s)	1739
BssT1I	CCWWGG	2 cut(s)	1423, 1498
Bst2BI	CACGAG	1 cut(s)	1739
Bst2UI	CCWGG	2 cut(s)	220, 927
Bst4CI	ACNGT	3 cut(s)	1396, 2138, 2502
Bst6I	CTCTTC	8 cut(s)	114, 120, 141, 165, 504, 672, 684, 1689
BstAUI	TGTACA	1 cut(s)	1391
BstC8I	GCNNGC	3 cut(s)	28, 1608, 1654
BstDSI	CCRYGG	3 cut(s)	769, 1468, 1498
BstEII	GGTNACC	1 cut(s)	1493
BstENI	CCTNNNNNAGG	2 cut(s)	2060, 2450
BstF5I	GGATG	7 cut(s)	765, 1012, 1165, 1263, 1308, 1909, 2098
BstHHI	GCGC	2 cut(s)	1606, 2250
BstKTI	GATC	8 cut(s)	252, 382, 553, 571, 1477, 1620, 1941, 2158
BstMAI	GTCTC	2 cut(s)	148, 181
BstMBI	GATC	8 cut(s)	249, 379, 550, 568, 1474, 1617, 1938, 2155
BstMWI	GCNNNNNNNGC	4 cut(s)	215, 771, 1607, 1658
BstNI	CCWGG	2 cut(s)	220, 927
BstNSI	RCATGY	4 cut(s)	83, 464, 734, 1646
BstPI	GGTNACC	1 cut(s)	1493
BstSCI	CCNGG	3 cut(s)	218, 901, 925
BstSFI	CTRYAG	2 cut(s)	556, 1026
BstSLI	GKGCMC	1 cut(s)	1798
BstV1I	GCAGC	7 cut(s)	704, 862, 1159, 1588, 1721, 2071, 2356
BstV2I	GAAGAC	3 cut(s)	53, 1725, 2489
BstX2I	RGATCY	3 cut(s)	550, 1938, 2155
BstXI	CCANNNNNNTGG	1 cut(s)	757
BstYI	RGATCY	3 cut(s)	550, 1938, 2155
BtgI	CCRYGG	3 cut(s)	769, 1468, 1498
BtsCI	GGATG	7 cut(s)	765, 1012, 1165, 1263, 1308, 1909, 2098
BtsI	GCAGTG	2 cut(s)	1394, 1656
BtsIMutI	CAGTG	7 cut(s)	101, 363, 1325, 1394, 1401, 1656, 1924
BveI	ACCTGC	2 cut(s)	2338, 2443
Cac8I	GCNNGC	3 cut(s)	28, 1608, 1654
CaiI	CAGNNNCTG	1 cut(s)	668
CfoI	GCGC	2 cut(s)	1606, 2250
Cfr13I	GGNCC	7 cut(s)	389, 653, 1341, 1676, 1846, 1886, 1972
Csp6I	GTAC	7 cut(s)	499, 899, 1280, 1392, 1503, 1764, 1770
CviQI	GTAC	7 cut(s)	499, 899, 1280, 1392, 1503, 1764, 1770
DpnI	GATC	8 cut(s)	251, 381, 552, 570, 1476, 1619, 1940, 2157
DpnII	GATC	8 cut(s)	249, 379, 550, 568, 1474, 1617, 1938, 2155
DrdI	GACNNNNNNGTC	1 cut(s)	1030
DseDI	GACNNNNNNGTC	1 cut(s)	1030
EaeI	YGGCCR	1 cut(s)	2289
Eam1104I	CTCTTC	8 cut(s)	114, 120, 141, 165, 504, 672, 684, 1689
EarI	CTCTTC	8 cut(s)	114, 120, 141, 165, 504, 672, 684, 1689
Eco130I	CCWWGG	2 cut(s)	1423, 1498
Eco147I	AGGCCT	2 cut(s)	1422, 2042
Eco47I	GGWCC	2 cut(s)	653, 1341
Eco57I	CTGAAG	1 cut(s)	1862
Eco91I	GGTNACC	1 cut(s)	1493
EcoNI	CCTNNNNNAGG	2 cut(s)	2060, 2450
EcoO109I	RGGNCCY	3 cut(s)	389, 1676, 1886
EcoO65I	GGTNACC	1 cut(s)	1493
EcoRI	GAATTC	1 cut(s)	1064
EcoRII	CCWGG	2 cut(s)	218, 925
EcoT14I	CCWWGG	2 cut(s)	1423, 1498
ErhI	CCWWGG	2 cut(s)	1423, 1498
FalI	AAGNNNNNCTT	4 cut(s)	1925, 1957, 2370, 2402
FaqI	GGGAC	5 cut(s)	29, 1441, 2218, 2243, 2341
FbaI	TGATCA	1 cut(s)	379
Fnu4HI	GCNGC	8 cut(s)	589, 718, 876, 1148, 1602, 1710, 2085, 2345
FokI	GGATG	7 cut(s)	752, 1019, 1172, 1270, 1295, 1916, 2105
Fsp4HI	GCNGC	8 cut(s)	589, 718, 876, 1148, 1602, 1710, 2085, 2345
FspBI	CTAG	5 cut(s)	585, 1518, 1767, 1811, 1832
FspI	TGCGCA	1 cut(s)	1605
GlaI	GCGC	2 cut(s)	1605, 2249
GluI	GCNGC	8 cut(s)	589, 718, 876, 1148, 1602, 1710, 2085, 2345
HapII	CCGG	3 cut(s)	902, 1967, 2437
HhaI	GCGC	2 cut(s)	1606, 2250
Hin6I	GCGC	2 cut(s)	1604, 2248
HinP1I	GCGC	2 cut(s)	1604, 2248
HincII	GTYRAC	3 cut(s)	625, 997, 1536
HindII	GTYRAC	3 cut(s)	625, 997, 1536
HpaII	CCGG	3 cut(s)	902, 1967, 2437
HphI	GGTGA	8 cut(s)	803, 934, 1313, 1617, 1790, 2027, 2044, 2362
Hpy166II	GTNNAC	7 cut(s)	625, 997, 1090, 1392, 1536, 1744, 1796
Hpy188I	TCNGA	7 cut(s)	444, 786, 1023, 1598, 1842, 1931, 2226
Hpy188III	TCNNGA	7 cut(s)	758, 1157, 1615, 1741, 1909, 2122, 2494
Hpy8I	GTNNAC	7 cut(s)	625, 997, 1090, 1392, 1536, 1744, 1796
Hpy99I	CGWCG	1 cut(s)	1244
HpyCH4III	ACNGT	3 cut(s)	1396, 2138, 2502
HpyCH4IV	ACGT	2 cut(s)	1239, 2278
HpyF10VI	GCNNNNNNNGC	4 cut(s)	215, 771, 1607, 1658
HpySE526I	ACGT	2 cut(s)	1239, 2278
HspAI	GCGC	2 cut(s)	1604, 2248
KpnI	GGTACC	1 cut(s)	902
Ksp22I	TGATCA	1 cut(s)	379
Kzo9I	GATC	8 cut(s)	249, 379, 550, 568, 1474, 1617, 1938, 2155
LmnI	GCTCC	2 cut(s)	865, 1213
Lsp1109I	GCAGC	7 cut(s)	704, 862, 1159, 1588, 1721, 2071, 2356
LweI	GCATC	7 cut(s)	628, 727, 774, 1317, 1591, 1811, 1914
MaeI	CTAG	5 cut(s)	585, 1518, 1767, 1811, 1832
MaeII	ACGT	2 cut(s)	1239, 2278
MaeIII	GTNAC	8 cut(s)	283, 954, 974, 1032, 1323, 1493, 1513, 1960
MalI	GATC	8 cut(s)	251, 381, 552, 570, 1476, 1619, 1940, 2157
MboI	GATC	8 cut(s)	249, 379, 550, 568, 1474, 1617, 1938, 2155
MfeI	CAATTG	1 cut(s)	1434
MflI	RGATCY	3 cut(s)	550, 1938, 2155
MhlI	GDGCHC	3 cut(s)	261, 1798, 2121
MlsI	TGGCCA	1 cut(s)	2291
MluCI	AATT	9 cut(s)	447, 711, 1064, 1128, 1232, 1434, 1875, 1991, 2477
MluNI	TGGCCA	1 cut(s)	2291
MlyI	GAGTC	5 cut(s)	1040, 1089, 1194, 2200, 2264
MmeI	TCCRAC	1 cut(s)	1380
Mox20I	TGGCCA	1 cut(s)	2291
MroXI	GAANNNNTTC	1 cut(s)	276
MscI	TGGCCA	1 cut(s)	2291
MseI	TTAA	8 cut(s)	1013, 1224, 1452, 1857, 2037, 2175, 2316, 2370
MslI	CAYNNNNRTG	3 cut(s)	735, 1587, 2277
Msp20I	TGGCCA	1 cut(s)	2291
MspI	CCGG	3 cut(s)	902, 1967, 2437
MspR9I	CCNGG	3 cut(s)	220, 903, 927
MunI	CAATTG	1 cut(s)	1434
Mva1269I	GAATGC	1 cut(s)	276
MvaI	CCWGG	2 cut(s)	220, 927
MwoI	GCNNNNNNNGC	4 cut(s)	215, 771, 1607, 1658
NciI	CCSGG	1 cut(s)	903
NcoI	CCATGG	1 cut(s)	1498
NdeII	GATC	8 cut(s)	249, 379, 550, 568, 1474, 1617, 1938, 2155
NlaIV	GGNNCC	6 cut(s)	345, 552, 576, 900, 1343, 2157
NmuCI	GTSAC	5 cut(s)	954, 974, 1032, 1323, 1960
NsbI	TGCGCA	1 cut(s)	1605
NspI	RCATGY	4 cut(s)	83, 464, 734, 1646
PaqCI	CACCTGC	2 cut(s)	2338, 2443
PasI	CCCWGGG	1 cut(s)	926
PceI	AGGCCT	2 cut(s)	1422, 2042
PcsI	WCGNNNNNNNCGW	1 cut(s)	56
PctI	GAATGC	1 cut(s)	276
PdmI	GAANNNNTTC	1 cut(s)	276
PfeI	GAWTC	5 cut(s)	519, 858, 1522, 2099, 2332
PflMI	CCANNNNNTGG	1 cut(s)	1871
PkrI	GCNGC	8 cut(s)	590, 719, 877, 1149, 1603, 1711, 2086, 2346
PleI	GAGTC	5 cut(s)	1039, 1089, 1193, 2200, 2263
PpsI	GAGTC	5 cut(s)	1039, 1089, 1193, 2200, 2263
PshBI	ATTAAT	1 cut(s)	1224
Psp6I	CCWGG	2 cut(s)	218, 925
PspEI	GGTNACC	1 cut(s)	1493
PspGI	CCWGG	2 cut(s)	218, 925
PspN4I	GGNNCC	6 cut(s)	345, 552, 576, 900, 1343, 2157
PspPI	GGNCC	7 cut(s)	389, 653, 1341, 1676, 1846, 1886, 1972
PstNI	CAGNNNCTG	1 cut(s)	668
PsuI	RGATCY	3 cut(s)	550, 1938, 2155
RsaI	GTAC	7 cut(s)	500, 900, 1281, 1393, 1504, 1765, 1771
RsaNI	GTAC	7 cut(s)	499, 899, 1280, 1392, 1503, 1764, 1770
RseI	CAYNNNNRTG	3 cut(s)	735, 1587, 2277
SaqAI	TTAA	8 cut(s)	1013, 1224, 1452, 1857, 2037, 2175, 2316, 2370
SatI	GCNGC	8 cut(s)	589, 718, 876, 1148, 1602, 1710, 2085, 2345
Sau3AI	GATC	8 cut(s)	249, 379, 550, 568, 1474, 1617, 1938, 2155
Sau96I	GGNCC	7 cut(s)	389, 653, 1341, 1676, 1846, 1886, 1972
ScaI	AGTACT	3 cut(s)	500, 1765, 1771
SchI	GAGTC	5 cut(s)	1040, 1089, 1194, 2200, 2264
ScrFI	CCNGG	3 cut(s)	220, 903, 927
SduI	GDGCHC	3 cut(s)	261, 1798, 2121
SfaNI	GCATC	7 cut(s)	628, 727, 774, 1317, 1591, 1811, 1914
SfcI	CTRYAG	2 cut(s)	556, 1026
SinI	GGWCC	2 cut(s)	653, 1341
SmiMI	CAYNNNNRTG	3 cut(s)	735, 1587, 2277
SmlI	CTYRAG	3 cut(s)	2057, 2120, 2401
SmoI	CTYRAG	3 cut(s)	2057, 2120, 2401
SpeI	ACTAGT	1 cut(s)	1766
Sse9I	AATT	9 cut(s)	447, 711, 1064, 1128, 1232, 1434, 1875, 1991, 2477
SseBI	AGGCCT	2 cut(s)	1422, 2042
SsiI	CCGC	2 cut(s)	467, 588
SspI	AATATT	1 cut(s)	1861
SspMI	CTAG	5 cut(s)	585, 1518, 1767, 1811, 1832
StuI	AGGCCT	2 cut(s)	1422, 2042
StyD4I	CCNGG	3 cut(s)	218, 901, 925
StyI	CCWWGG	2 cut(s)	1423, 1498
TaaI	ACNGT	3 cut(s)	1396, 2138, 2502
TaiI	ACGT	2 cut(s)	1242, 2281
TaqI	TCGA	3 cut(s)	328, 1242, 2258
TaqII	GACCGA	2 cut(s)	670, 942
TasI	AATT	9 cut(s)	447, 711, 1064, 1128, 1232, 1434, 1875, 1991, 2477
TatI	WGTACW	4 cut(s)	498, 1391, 1763, 1769
TauI	GCSGC	1 cut(s)	591
TfiI	GAWTC	5 cut(s)	519, 858, 1522, 2099, 2332
Tru1I	TTAA	8 cut(s)	1013, 1224, 1452, 1857, 2037, 2175, 2316, 2370
Tru9I	TTAA	8 cut(s)	1013, 1224, 1452, 1857, 2037, 2175, 2316, 2370
TscAI	CASTG	7 cut(s)	108, 370, 1332, 1394, 1401, 1663, 1924
TseFI	GTSAC	5 cut(s)	954, 974, 1032, 1323, 1960
TseI	GCWGC	7 cut(s)	717, 875, 1147, 1601, 1709, 2084, 2344
Tsp45I	GTSAC	5 cut(s)	954, 974, 1032, 1323, 1960
TspGWI	ACGGA	2 cut(s)	758, 1270
TspRI	CASTG	7 cut(s)	108, 370, 1332, 1394, 1401, 1663, 1924
Van91I	CCANNNNNTGG	1 cut(s)	1871
VneI	GTGCAC	1 cut(s)	1794
VpaK11BI	GGWCC	2 cut(s)	653, 1341
VspI	ATTAAT	1 cut(s)	1224
XagI	CCTNNNNNAGG	2 cut(s)	2060, 2450
XapI	RAATTY	2 cut(s)	447, 1064
XceI	RCATGY	4 cut(s)	83, 464, 734, 1646
XmnI	GAANNNNTTC	1 cut(s)	276
XspI	CTAG	5 cut(s)	585, 1518, 1767, 1811, 1832
ZrmI	AGTACT	3 cut(s)	500, 1765, 1771

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.