zinc finger CCCH domain-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 451 |
| Acc16I | TGCGCA | 1 cut(s) | 893 |
| Acc36I | ACCTGC | 1 cut(s) | 451 |
| AccB1I | GGYRCC | 1 cut(s) | 439 |
| AccBSI | CCGCTC | 1 cut(s) | 788 |
| AccI | GTMKAC | 1 cut(s) | 1200 |
| AciI | CCGC | 6 cut(s) | 144, 310, 786, 1075, 1870, 2055 |
| AclWI | GGATC | 6 cut(s) | 419, 641, 1326, 1339, 1449, 2013 |
| AcoI | YGGCCR | 1 cut(s) | 415 |
| AcsI | RAATTY | 4 cut(s) | 347, 586, 1267, 1413 |
| AdeI | CACNNNGTG | 1 cut(s) | 377 |
| AfaI | GTAC | 2 cut(s) | 1057, 1815 |
| AflIII | ACRYGT | 1 cut(s) | 1377 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 640, 1698 |
| AhlI | ACTAGT | 1 cut(s) | 1936 |
| AjnI | CCWGG | 9 cut(s) | 190, 448, 475, 760, 793, 898, 1023, 1051, 1251 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1241, 1273, 1577, 1609 |
| AluBI | AGCT | 9 cut(s) | 35, 701, 721, 817, 881, 969, 1063, 1082, 1641 |
| AluI | AGCT | 9 cut(s) | 35, 701, 721, 817, 881, 969, 1063, 1082, 1641 |
| Alw21I | GWGCWC | 1 cut(s) | 295 |
| Alw26I | GTCTC | 5 cut(s) | 1073, 1386, 1622, 1937, 1973 |
| Alw44I | GTGCAC | 1 cut(s) | 291 |
| AlwI | GGATC | 6 cut(s) | 419, 641, 1326, 1339, 1449, 2013 |
| Ama87I | CYCGRG | 1 cut(s) | 671 |
| ApaLI | GTGCAC | 1 cut(s) | 291 |
| ApeKI | GCWGC | 2 cut(s) | 342, 881 |
| ApoI | RAATTY | 4 cut(s) | 347, 586, 1267, 1413 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1121, 1153 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 690 |
| AspLEI | GCGC | 1 cut(s) | 894 |
| AsuC2I | CCSGG | 1 cut(s) | 777 |
| AvaI | CYCGRG | 1 cut(s) | 671 |
| AvaII | GGWCC | 2 cut(s) | 634, 2029 |
| BaeGI | GKGCMC | 1 cut(s) | 295 |
| BalI | TGGCCA | 1 cut(s) | 417 |
| BamHI | GGATCC | 1 cut(s) | 1331 |
| BanI | GGYRCC | 1 cut(s) | 439 |
| BanII | GRGCYC | 3 cut(s) | 784, 933, 1785 |
| Bbv12I | GWGCWC | 1 cut(s) | 295 |
| BbvCI | CCTCAGC | 2 cut(s) | 1122, 1391 |
| BbvI | GCAGC | 2 cut(s) | 329, 868 |
| BccI | CCATC | 5 cut(s) | 277, 463, 1316, 1322, 2012 |
| BceAI | ACGGC | 1 cut(s) | 419 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 812, 846 |
| BciT130I | CCWGG | 9 cut(s) | 192, 450, 477, 762, 795, 900, 1025, 1053, 1253 |
| BciVI | GTATCC | 3 cut(s) | 1240, 1550, 1708 |
| BcnI | CCSGG | 1 cut(s) | 777 |
| BcoDI | GTCTC | 5 cut(s) | 1073, 1386, 1622, 1937, 1973 |
| BcuI | ACTAGT | 1 cut(s) | 1936 |
| BfaI | CTAG | 7 cut(s) | 249, 507, 702, 1083, 1487, 1851, 1937 |
| BfmI | CTRYAG | 1 cut(s) | 1774 |
| BfuAI | ACCTGC | 1 cut(s) | 451 |
| BfuI | GTATCC | 3 cut(s) | 1240, 1550, 1708 |
| BisI | GCNGC | 3 cut(s) | 343, 882, 1870 |
| BlpI | GCTNAGC | 1 cut(s) | 1078 |
| BlsI | GCNGC | 3 cut(s) | 344, 883, 1871 |
| Bme18I | GGWCC | 2 cut(s) | 634, 2029 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 640, 1698 |
| BmeT110I | CYCGRG | 1 cut(s) | 671 |
| BmsI | GCATC | 4 cut(s) | 512, 535, 851, 1438 |
| BpmI | CTGGAG | 4 cut(s) | 432, 777, 921, 1274 |
| Bpu10I | CCTNAGC | 3 cut(s) | 213, 1122, 1391 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1078 |
| BpuMI | CCSGG | 1 cut(s) | 777 |
| BsaBI | GATNNNNATC | 1 cut(s) | 651 |
| BsaWI | WCCGGW | 1 cut(s) | 1928 |
| Bse118I | RCCGGY | 2 cut(s) | 146, 499 |
| Bse1I | ACTGG | 5 cut(s) | 87, 103, 288, 1951, 2007 |
| Bse3DI | GCAATG | 2 cut(s) | 1170, 1235 |
| Bse8I | GATNNNNATC | 1 cut(s) | 651 |
| BseBI | CCWGG | 9 cut(s) | 192, 450, 477, 762, 795, 900, 1025, 1053, 1253 |
| BseGI | GGATG | 5 cut(s) | 269, 474, 931, 1048, 1150 |
| BseJI | GATNNNNATC | 1 cut(s) | 651 |
| BseMI | GCAATG | 2 cut(s) | 1170, 1235 |
| BseMII | CTCAG | 9 cut(s) | 227, 419, 670, 956, 1050, 1136, 1350, 1382, 1493 |
| BseNI | ACTGG | 5 cut(s) | 87, 103, 288, 1951, 2007 |
| BseRI | GAGGAG | 7 cut(s) | 225, 228, 780, 783, 1277, 1408, 1908 |
| BseSI | GKGCMC | 1 cut(s) | 295 |
| BseXI | GCAGC | 2 cut(s) | 329, 868 |
| BsgI | GTGCAG | 1 cut(s) | 164 |
| BshNI | GGYRCC | 1 cut(s) | 439 |
| BsiHKAI | GWGCWC | 1 cut(s) | 295 |
| BsiHKCI | CYCGRG | 1 cut(s) | 671 |
| BsiSI | CCGG | 4 cut(s) | 147, 500, 777, 1929 |
| BslFI | GGGAC | 5 cut(s) | 647, 853, 1006, 1388, 1890 |
| BsmAI | GTCTC | 5 cut(s) | 1073, 1386, 1622, 1937, 1973 |
| BsmBI | CGTCTC | 1 cut(s) | 1622 |
| BsmFI | GGGAC | 5 cut(s) | 647, 853, 1006, 1388, 1890 |
| BsoBI | CYCGRG | 1 cut(s) | 671 |
| Bsp1286I | GDGCHC | 4 cut(s) | 295, 784, 933, 1785 |
| Bsp143I | GATC | 6 cut(s) | 424, 534, 646, 1331, 1441, 2005 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1078 |
| Bsp19I | CCATGG | 1 cut(s) | 2044 |
| BspACI | CCGC | 6 cut(s) | 144, 310, 786, 1075, 1870, 2055 |
| BspCNI | CTCAG | 9 cut(s) | 226, 418, 669, 957, 1051, 1135, 1349, 1383, 1494 |
| BspMI | ACCTGC | 1 cut(s) | 451 |
| BspPI | GGATC | 6 cut(s) | 419, 641, 1326, 1339, 1449, 2013 |
| BspT107I | GGYRCC | 1 cut(s) | 439 |
| BsrBI | CCGCTC | 1 cut(s) | 788 |
| BsrDI | GCAATG | 2 cut(s) | 1170, 1235 |
| BsrFI | RCCGGY | 2 cut(s) | 146, 499 |
| BsrI | ACTGG | 5 cut(s) | 87, 103, 288, 1951, 2007 |
| BssAI | RCCGGY | 2 cut(s) | 146, 499 |
| BssMI | GATC | 6 cut(s) | 424, 534, 646, 1331, 1441, 2005 |
| BssT1I | CCWWGG | 6 cut(s) | 708, 1299, 1491, 1547, 1806, 2044 |
| Bst2UI | CCWGG | 9 cut(s) | 192, 450, 477, 762, 795, 900, 1025, 1053, 1253 |
| Bst4CI | ACNGT | 4 cut(s) | 1633, 1775, 1792, 1984 |
| Bst6I | CTCTTC | 2 cut(s) | 760, 1852 |
| BstDSI | CCRYGG | 2 cut(s) | 435, 2044 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 447, 765, 1028 |
| BstF5I | GGATG | 5 cut(s) | 269, 474, 931, 1048, 1150 |
| BstHHI | GCGC | 1 cut(s) | 894 |
| BstKTI | GATC | 6 cut(s) | 427, 537, 649, 1334, 1444, 2008 |
| BstMAI | GTCTC | 5 cut(s) | 1073, 1386, 1622, 1937, 1973 |
| BstMBI | GATC | 6 cut(s) | 424, 534, 646, 1331, 1441, 2005 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 147, 554, 623, 878, 1301, 1396, 1658 |
| BstNI | CCWGG | 9 cut(s) | 192, 450, 477, 762, 795, 900, 1025, 1053, 1253 |
| BstNSI | RCATGY | 2 cut(s) | 485, 1381 |
| BstSFI | CTRYAG | 1 cut(s) | 1774 |
| BstSLI | GKGCMC | 1 cut(s) | 295 |
| BstV1I | GCAGC | 2 cut(s) | 329, 868 |
| BstX2I | RGATCY | 2 cut(s) | 646, 1331 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 281, 1052, 2002, 2051 |
| BstYI | RGATCY | 2 cut(s) | 646, 1331 |
| BsuI | GTATCC | 3 cut(s) | 1240, 1550, 1708 |
| BtgI | CCRYGG | 2 cut(s) | 435, 2044 |
| BtsCI | GGATG | 5 cut(s) | 269, 474, 931, 1048, 1150 |
| BtsIMutI | CAGTG | 3 cut(s) | 295, 544, 1771 |
| BveI | ACCTGC | 1 cut(s) | 451 |
| CfoI | GCGC | 1 cut(s) | 894 |
| Cfr10I | RCCGGY | 2 cut(s) | 146, 499 |
| Csp6I | GTAC | 2 cut(s) | 1056, 1814 |
| CviQI | GTAC | 2 cut(s) | 1056, 1814 |
| DpnI | GATC | 6 cut(s) | 426, 536, 648, 1333, 1443, 2007 |
| DpnII | GATC | 6 cut(s) | 424, 534, 646, 1331, 1441, 2005 |
| DraI | TTTAAA | 1 cut(s) | 1509 |
| DraIII | CACNNNGTG | 1 cut(s) | 377 |
| DriI | GACNNNNNGTC | 2 cut(s) | 640, 1698 |
| EaeI | YGGCCR | 1 cut(s) | 415 |
| Eam1104I | CTCTTC | 2 cut(s) | 760, 1852 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 640, 1698 |
| EarI | CTCTTC | 2 cut(s) | 760, 1852 |
| Eco130I | CCWWGG | 6 cut(s) | 708, 1299, 1491, 1547, 1806, 2044 |
| Eco24I | GRGCYC | 3 cut(s) | 784, 933, 1785 |
| Eco32I | GATATC | 1 cut(s) | 1036 |
| Eco47I | GGWCC | 2 cut(s) | 634, 2029 |
| Eco88I | CYCGRG | 1 cut(s) | 671 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 447, 765, 1028 |
| EcoO109I | RGGNCCY | 2 cut(s) | 773, 2029 |
| EcoRI | GAATTC | 1 cut(s) | 1413 |
| EcoRII | CCWGG | 9 cut(s) | 190, 448, 475, 760, 793, 898, 1023, 1051, 1251 |
| EcoRV | GATATC | 1 cut(s) | 1036 |
| EcoT14I | CCWWGG | 6 cut(s) | 708, 1299, 1491, 1547, 1806, 2044 |
| EcoT22I | ATGCAT | 1 cut(s) | 1453 |
| EcoT38I | GRGCYC | 3 cut(s) | 784, 933, 1785 |
| ErhI | CCWWGG | 6 cut(s) | 708, 1299, 1491, 1547, 1806, 2044 |
| Esp3I | CGTCTC | 1 cut(s) | 1622 |
| FaqI | GGGAC | 5 cut(s) | 647, 853, 1006, 1388, 1890 |
| FauI | CCCGC | 3 cut(s) | 317, 793, 1082 |
| FauNDI | CATATG | 2 cut(s) | 412, 456 |
| FblI | GTMKAC | 1 cut(s) | 1200 |
| Fnu4HI | GCNGC | 3 cut(s) | 343, 882, 1870 |
| FokI | GGATG | 5 cut(s) | 256, 481, 938, 1035, 1157 |
| FriOI | GRGCYC | 3 cut(s) | 784, 933, 1785 |
| Fsp4HI | GCNGC | 3 cut(s) | 343, 882, 1870 |
| FspBI | CTAG | 7 cut(s) | 249, 507, 702, 1083, 1487, 1851, 1937 |
| FspI | TGCGCA | 1 cut(s) | 893 |
| GlaI | GCGC | 1 cut(s) | 893 |
| GluI | GCNGC | 3 cut(s) | 343, 882, 1870 |
| GsuI | CTGGAG | 4 cut(s) | 432, 777, 921, 1274 |
| HapII | CCGG | 4 cut(s) | 147, 500, 777, 1929 |
| HhaI | GCGC | 1 cut(s) | 894 |
| Hin6I | GCGC | 1 cut(s) | 892 |
| HinP1I | GCGC | 1 cut(s) | 892 |
| HinfI | GANTC | 6 cut(s) | 86, 223, 641, 691, 916, 1964 |
| HpaII | CCGG | 4 cut(s) | 147, 500, 777, 1929 |
| Hpy166II | GTNNAC | 3 cut(s) | 17, 293, 1201 |
| Hpy188I | TCNGA | 6 cut(s) | 646, 729, 966, 1339, 1826, 1963 |
| Hpy8I | GTNNAC | 3 cut(s) | 17, 293, 1201 |
| HpyCH4III | ACNGT | 4 cut(s) | 1633, 1775, 1792, 1984 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 147, 554, 623, 878, 1301, 1396, 1658 |
| HspAI | GCGC | 1 cut(s) | 892 |
| KroI | GCCGGC | 2 cut(s) | 146, 499 |
| KroNI | GCCGGC | 2 cut(s) | 148, 501 |
| Kzo9I | GATC | 6 cut(s) | 424, 534, 646, 1331, 1441, 2005 |
| Lsp1109I | GCAGC | 2 cut(s) | 329, 868 |
| LweI | GCATC | 4 cut(s) | 512, 535, 851, 1438 |
| MaeI | CTAG | 7 cut(s) | 249, 507, 702, 1083, 1487, 1851, 1937 |
| MaeIII | GTNAC | 6 cut(s) | 353, 602, 1286, 1365, 1480, 1792 |
| MalI | GATC | 6 cut(s) | 426, 536, 648, 1333, 1443, 2007 |
| MbiI | CCGCTC | 1 cut(s) | 788 |
| MboI | GATC | 6 cut(s) | 424, 534, 646, 1331, 1441, 2005 |
| MboII | GAAGA | 7 cut(s) | 79, 544, 777, 1104, 1220, 1768, 1869 |
| MflI | RGATCY | 2 cut(s) | 646, 1331 |
| MhlI | GDGCHC | 4 cut(s) | 295, 784, 933, 1785 |
| MlsI | TGGCCA | 1 cut(s) | 417 |
| MluNI | TGGCCA | 1 cut(s) | 417 |
| MlyI | GAGTC | 2 cut(s) | 80, 650 |
| MmeI | TCCRAC | 3 cut(s) | 1239, 1426, 1593 |
| Mox20I | TGGCCA | 1 cut(s) | 417 |
| Mph1103I | ATGCAT | 1 cut(s) | 1453 |
| MroNI | GCCGGC | 2 cut(s) | 146, 499 |
| MroXI | GAANNNNTTC | 1 cut(s) | 690 |
| MscI | TGGCCA | 1 cut(s) | 417 |
| MseI | TTAA | 3 cut(s) | 303, 1508, 1737 |
| MslI | CAYNNNNRTG | 3 cut(s) | 51, 279, 2049 |
| Msp20I | TGGCCA | 1 cut(s) | 417 |
| MspA1I | CMGCKG | 1 cut(s) | 1641 |
| MspI | CCGG | 4 cut(s) | 147, 500, 777, 1929 |
| MvaI | CCWGG | 9 cut(s) | 192, 450, 477, 762, 795, 900, 1025, 1053, 1253 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 147, 554, 623, 878, 1301, 1396, 1658 |
| NaeI | GCCGGC | 2 cut(s) | 148, 501 |
| NciI | CCSGG | 1 cut(s) | 777 |
| NcoI | CCATGG | 1 cut(s) | 2044 |
| NdeI | CATATG | 2 cut(s) | 412, 456 |
| NdeII | GATC | 6 cut(s) | 424, 534, 646, 1331, 1441, 2005 |
| NgoMIV | GCCGGC | 2 cut(s) | 146, 499 |
| NmeAIII | GCCGAG | 1 cut(s) | 1916 |
| NmuCI | GTSAC | 5 cut(s) | 353, 602, 1286, 1365, 1792 |
| NsbI | TGCGCA | 1 cut(s) | 893 |
| NsiI | ATGCAT | 1 cut(s) | 1453 |
| NspI | RCATGY | 2 cut(s) | 485, 1381 |
| PaeI | GCATGC | 1 cut(s) | 485 |
| PaeR7I | CTCGAG | 1 cut(s) | 671 |
| PaqCI | CACCTGC | 1 cut(s) | 451 |
| PasI | CCCWGGG | 1 cut(s) | 1024 |
| PciI | ACATGT | 1 cut(s) | 1377 |
| PdiI | GCCGGC | 2 cut(s) | 148, 501 |
| PdmI | GAANNNNTTC | 1 cut(s) | 690 |
| PfeI | GAWTC | 4 cut(s) | 223, 691, 916, 1964 |
| PfoI | TCCNGGA | 1 cut(s) | 793 |
| PkrI | GCNGC | 3 cut(s) | 344, 883, 1871 |
| PleI | GAGTC | 2 cut(s) | 80, 649 |
| PpsI | GAGTC | 2 cut(s) | 80, 649 |
| PpuMI | RGGWCCY | 1 cut(s) | 2029 |
| PscI | ACATGT | 1 cut(s) | 1377 |
| Psp5II | RGGWCCY | 1 cut(s) | 2029 |
| Psp6I | CCWGG | 9 cut(s) | 190, 448, 475, 760, 793, 898, 1023, 1051, 1251 |
| PspGI | CCWGG | 9 cut(s) | 190, 448, 475, 760, 793, 898, 1023, 1051, 1251 |
| PspPPI | RGGWCCY | 1 cut(s) | 2029 |
| PspXI | VCTCGAGB | 1 cut(s) | 671 |
| PsuI | RGATCY | 2 cut(s) | 646, 1331 |
| PvuII | CAGCTG | 1 cut(s) | 1641 |
| RsaI | GTAC | 2 cut(s) | 1057, 1815 |
| RsaNI | GTAC | 2 cut(s) | 1056, 1814 |
| RseI | CAYNNNNRTG | 3 cut(s) | 51, 279, 2049 |
| SaqAI | TTAA | 3 cut(s) | 303, 1508, 1737 |
| SatI | GCNGC | 3 cut(s) | 343, 882, 1870 |
| Sau3AI | GATC | 6 cut(s) | 424, 534, 646, 1331, 1441, 2005 |
| SchI | GAGTC | 2 cut(s) | 80, 650 |
| SduI | GDGCHC | 4 cut(s) | 295, 784, 933, 1785 |
| SfaNI | GCATC | 4 cut(s) | 512, 535, 851, 1438 |
| SfcI | CTRYAG | 1 cut(s) | 1774 |
| Sfr274I | CTCGAG | 1 cut(s) | 671 |
| SinI | GGWCC | 2 cut(s) | 634, 2029 |
| SlaI | CTCGAG | 1 cut(s) | 671 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 51, 279, 2049 |
| SmlI | CTYRAG | 1 cut(s) | 671 |
| SmoI | CTYRAG | 1 cut(s) | 671 |
| SpeI | ACTAGT | 1 cut(s) | 1936 |
| SphI | GCATGC | 1 cut(s) | 485 |
| SsiI | CCGC | 6 cut(s) | 144, 310, 786, 1075, 1870, 2055 |
| SspMI | CTAG | 7 cut(s) | 249, 507, 702, 1083, 1487, 1851, 1937 |
| StyI | CCWWGG | 6 cut(s) | 708, 1299, 1491, 1547, 1806, 2044 |
| TaaI | ACNGT | 4 cut(s) | 1633, 1775, 1792, 1984 |
| TaqI | TCGA | 5 cut(s) | 116, 672, 919, 1444, 1864 |
| TauI | GCSGC | 1 cut(s) | 1872 |
| TfiI | GAWTC | 4 cut(s) | 223, 691, 916, 1964 |
| Tru1I | TTAA | 3 cut(s) | 303, 1508, 1737 |
| Tru9I | TTAA | 3 cut(s) | 303, 1508, 1737 |
| TscAI | CASTG | 3 cut(s) | 295, 544, 1778 |
| TseFI | GTSAC | 5 cut(s) | 353, 602, 1286, 1365, 1792 |
| TseI | GCWGC | 2 cut(s) | 342, 881 |
| Tsp45I | GTSAC | 5 cut(s) | 353, 602, 1286, 1365, 1792 |
| TspDTI | ATGAA | 5 cut(s) | 35, 236, 510, 1161, 1911 |
| TspRI | CASTG | 3 cut(s) | 295, 544, 1778 |
| VneI | GTGCAC | 1 cut(s) | 291 |
| VpaK11BI | GGWCC | 2 cut(s) | 634, 2029 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 447, 765, 1028 |
| XapI | RAATTY | 4 cut(s) | 347, 586, 1267, 1413 |
| XbaI | TCTAGA | 1 cut(s) | 248 |
| XceI | RCATGY | 2 cut(s) | 485, 1381 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 371, 872, 1049 |
| XhoI | CTCGAG | 1 cut(s) | 671 |
| XmiI | GTMKAC | 1 cut(s) | 1200 |
| XmnI | GAANNNNTTC | 1 cut(s) | 690 |
| XspI | CTAG | 7 cut(s) | 249, 507, 702, 1083, 1487, 1851, 1937 |
| Zsp2I | ATGCAT | 1 cut(s) | 1453 |