Dehydrogenase reductase SDR family member on chromosome
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0340761 RchiOBHm_Chr5g0016751 RchiOBHm_Chr7g0222771 RchiOBHm_Chr7g0229791 RchiOBHm_Chr7g0230051 RchiOBHm_Chr7g0230151 |
| rosa_laevigata | RLG00000001515 RLG00000001518 RLG00000029042 |
| rosa_multiflora | Rmu_sc0001621.1_g000007 Rmu_sc0006671.1_g000001 Rmu_sc0026078.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00311380 Rroxscaffold_7G00156350 |
| rosa_rugosa | Rorug02G0279300 Rorug05G0117200 |
| rosa_samantha | Rh1AG176900 Rh1CG164300 Rh2DG376400 Rh5AG177200 Rh5CG138800 Rh7AG408600 Rh7CG427300 Rh7DG403800 Rh7DG403900 Rh7DG404300 Rh7DG405000 Rh7DG405500 Rh7DG406100 |
| rosa_wichuraiana | Rw7G034010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 145 |
| AccB1I | GGYRCC | 1 cut(s) | 145 |
| AciI | CCGC | 1 cut(s) | 249 |
| AcsI | RAATTY | 1 cut(s) | 168 |
| AfaI | GTAC | 1 cut(s) | 147 |
| AgsI | TTSAA | 2 cut(s) | 167, 195 |
| ApoI | RAATTY | 1 cut(s) | 168 |
| Asp718I | GGTACC | 1 cut(s) | 145 |
| AsuHPI | GGTGA | 2 cut(s) | 77, 238 |
| BanI | GGYRCC | 1 cut(s) | 145 |
| BclI | TGATCA | 1 cut(s) | 262 |
| BfaI | CTAG | 1 cut(s) | 240 |
| BmiI | GGNNCC | 2 cut(s) | 46, 147 |
| BsaJI | CCNNGG | 1 cut(s) | 157 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 138, 168 |
| Bse1I | ACTGG | 1 cut(s) | 46 |
| BseDI | CCNNGG | 1 cut(s) | 157 |
| BseNI | ACTGG | 1 cut(s) | 46 |
| BseRI | GAGGAG | 2 cut(s) | 59, 146 |
| BshNI | GGYRCC | 1 cut(s) | 145 |
| Bsp143I | GATC | 2 cut(s) | 79, 262 |
| BspACI | CCGC | 1 cut(s) | 249 |
| BspLI | GGNNCC | 2 cut(s) | 46, 147 |
| BspT107I | GGYRCC | 1 cut(s) | 145 |
| BsrI | ACTGG | 1 cut(s) | 46 |
| BssECI | CCNNGG | 1 cut(s) | 157 |
| BssMI | GATC | 2 cut(s) | 79, 262 |
| Bst6I | CTCTTC | 2 cut(s) | 32, 196 |
| BstKTI | GATC | 2 cut(s) | 82, 265 |
| BstMBI | GATC | 2 cut(s) | 79, 262 |
| CseI | GACGC | 1 cut(s) | 129 |
| Csp6I | GTAC | 1 cut(s) | 146 |
| CviJI | RGCY | 2 cut(s) | 162, 258 |
| CviKI_1 | RGCY | 2 cut(s) | 162, 258 |
| CviQI | GTAC | 1 cut(s) | 146 |
| DpnI | GATC | 2 cut(s) | 81, 264 |
| DpnII | GATC | 2 cut(s) | 79, 262 |
| Eam1104I | CTCTTC | 2 cut(s) | 32, 196 |
| EarI | CTCTTC | 2 cut(s) | 32, 196 |
| FaiI | YATR | 2 cut(s) | 15, 261 |
| FbaI | TGATCA | 1 cut(s) | 262 |
| FspBI | CTAG | 1 cut(s) | 240 |
| HgaI | GACGC | 1 cut(s) | 129 |
| HinfI | GANTC | 3 cut(s) | 18, 176, 243 |
| HphI | GGTGA | 2 cut(s) | 77, 238 |
| Hpy188I | TCNGA | 1 cut(s) | 175 |
| Hpy188III | TCNNGA | 2 cut(s) | 77, 240 |
| HpyAV | CCTTC | 2 cut(s) | 83, 248 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 187 |
| KpnI | GGTACC | 1 cut(s) | 149 |
| Ksp22I | TGATCA | 1 cut(s) | 262 |
| Kzo9I | GATC | 2 cut(s) | 79, 262 |
| LpnPI | CCDG | 3 cut(s) | 27, 90, 204 |
| MaeI | CTAG | 1 cut(s) | 240 |
| MalI | GATC | 2 cut(s) | 81, 264 |
| MboI | GATC | 2 cut(s) | 79, 262 |
| MboII | GAAGA | 2 cut(s) | 19, 183 |
| MluCI | AATT | 3 cut(s) | 5, 168, 207 |
| MlyI | GAGTC | 2 cut(s) | 12, 170 |
| MmeI | TCCRAC | 3 cut(s) | 97, 198, 223 |
| MnlI | CCTC | 5 cut(s) | 58, 69, 80, 98, 167 |
| MseI | TTAA | 1 cut(s) | 210 |
| NdeII | GATC | 2 cut(s) | 79, 262 |
| NlaIV | GGNNCC | 2 cut(s) | 46, 147 |
| NmeAIII | GCCGAG | 1 cut(s) | 138 |
| PfeI | GAWTC | 1 cut(s) | 243 |
| PleI | GAGTC | 2 cut(s) | 12, 170 |
| PpsI | GAGTC | 2 cut(s) | 12, 170 |
| PspN4I | GGNNCC | 2 cut(s) | 46, 147 |
| RsaI | GTAC | 1 cut(s) | 147 |
| RsaNI | GTAC | 1 cut(s) | 146 |
| SaqAI | TTAA | 1 cut(s) | 210 |
| Sau3AI | GATC | 2 cut(s) | 79, 262 |
| SchI | GAGTC | 2 cut(s) | 12, 170 |
| SetI | ASST | 4 cut(s) | 50, 90, 147, 151 |
| Sse9I | AATT | 3 cut(s) | 5, 168, 207 |
| SsiI | CCGC | 1 cut(s) | 249 |
| SspI | AATATT | 1 cut(s) | 225 |
| SspMI | CTAG | 1 cut(s) | 240 |
| TaqI | TCGA | 1 cut(s) | 61 |
| TasI | AATT | 3 cut(s) | 5, 168, 207 |
| TfiI | GAWTC | 1 cut(s) | 243 |
| Tru1I | TTAA | 1 cut(s) | 210 |
| Tru9I | TTAA | 1 cut(s) | 210 |
| XapI | RAATTY | 1 cut(s) | 168 |
| XbaI | TCTAGA | 1 cut(s) | 239 |
| XspI | CTAG | 1 cut(s) | 240 |