Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006774.1

Orthogroup ID

OG0002972

Physical Location & Seq

Genomic Coordinates Forward (+)

53905 .. 55824

Gene Structure 1920 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1920 bp

atgccaccgttgtgtgaaccctctctggtagtggctttaatacaaaaatgcaccgccataaactcgctcagggaagcgcgtcgactccacgcgcttctcctaaccaccacaaccgtcgccccgcgttctgtgttcctgtacaacaatgtgctatctatgtatgcacggtgcggctcgctgggagatgcacgcaaggtgtttgacgaaatgcctcaaagaagtcttgtttcgttcaatgcgctggctgcagcctattcccggagttcagacactgctggtttggcattgacattgctaaaacaaatgggagttgaatgtctcaggccaaatgtttcgactttcacgagtgtgatacaagcctcatgtactcttgaggattggttggttggctctttggttcatgcacaagttgtgaaatgtggattcttgaatgatgtgtatcttcagacagctatgcttgggatgtattccagctgtggggatttggtatctgctagcagagttttcggaggaatggttgatagagatgctgtggcttggaattcgatgattttcgggtatttgaagaatggtaagaacaaggaagggcttcatttgtttgatgctatgttgaggactggagttattcctactcagttcacatattcaatggttttgaatgtgtgtagcagattgagatatttgaatctggggaaaatcatccatgcccaagtcatagtttcaagcacacaaggtgatttggctttggagaattcactgcttgatatgtattgcaactctggtgacacccaagcagcttttagtgtgtttaataaaatggacagcccggatttggtttcatggaacacaatgattgctgggtattcagaaaatgaggatggggagaaggcgatgaatttgtttgcccggttgaaaagattgtgttatcttaaaccagatgaatatacttatgcagcaggtacataccttgcctctgactatggtaagcttcttcatgctcaagtcataaaagtaggactcgagaagagtatatttgtaggaactgcactagtgtctatgtacttcaagaacagcgaaacggatagtgctcaaaaggcattttattctatttctgagaaggatgttgttctctggactgagatgatcatgggttattcaagattggctgatggggagagtgcaattaagttcttcaaagaaatgtgcaaggaaagccataaggttgacagctttgctctgagtggagctttgagtgcttgttccgacctggccatgttaaaacaaggtgagatgattcacttgcaggccttaaaaacaggatttgatgttgaaatgtctgtgtgcgggagtctgttggatatgtatgcaaaaaacggttgccttgaatctgcttactgtatattttctcaagttgtggagcctgatttgaaatgttggaactcgatgcttgggggatatagtcaacatggcatggcagaagaagcattgaagctcttttttgagatccaaaaacatggtctcgtaccagaccaagtaacatttctgtctctactctcagcttgcaaccacagtgggttggttgaagtaggaaagttcttgtggaattgtatgaaggagaatggtatcccacctgggcctaagcactgctcttgcatggttagtttgttaagtcgagctcgactactgaatgaggcagaggagcttattatcaagtcaccatttaatgaagataatcttgaactgtggagaactttgctgagctcgtgcgtcatccataagaacttggagataggagttcatgcagcagagcaggttctaaaggttgatgcagaagacagtgcaacacatatcttgctaccacataggatgttgagagaaatgttcctgaaaaatctctttatggaatcaacatcttattaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_8 PPR PPR_2

Protein Analysis

639

Amino Acids

70.76

Weight (kDa)

5.96

Isoelectric Point (pI)

39.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	176 - 223	1.3e-12	PPR repeat family
PPR	PF01535	178 - 207	9.2e-06	PPR repeat
PPR_2	PF13041	276 - 317	1e-08	PPR repeat family
PPR_2	PF13041	373 - 420	1.3e-06	PPR repeat family
PPR_2	PF13041	474 - 521	7.6e-11	PPR repeat family
PPR	PF01535	478 - 507	5.4e-08	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002972)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50420 AT3G50420
fragaria_vesca	FvH4_1g14840
malus_domestica	MD06G1092000.v1.1 MD15G1276000.v1.1
prunus_persica	Prupe.7G142000_v2.0.a1
pyrus_communis	pycom06g08800 pycom15g23890
rosa_chinensis	RchiOBHm_Chr1g0329891 RchiOBHm_Chr2g0103801
rosa_laevigata	RLG00000017261 RLG00000017264 RLG00000029855 RLG00000029861
rosa_multiflora	Rmu_sc0000112.1_g000010 Rmu_sc0000112.1_g000024 Rmu_sc0000112.1_g000025 Rmu_sc0002081.1_g000002 Rmu_sc0002081.1_g000010 Rmu_sc0006774.1_g000014
rosa_roxburghii	Rroxscaffold_2G00139300 Rroxscaffold_2G00139350 Rroxscaffold_4G00320530
rosa_rugosa	Rorug01G0084100 Rorug02G0117300
rosa_samantha	Rh1AG102000 Rh1BG081200 Rh1CG097500 Rh1DG105100 Rh2AG166400 Rh2BG173600 Rh2CG172300 Rh2DG171800
rosa_wichuraiana	Rw0G002030 Rw0G006910 Rw1G008070 Rw1G008120 Rw2G013030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	947, 1801
AccI	GTMKAC	1 cut(s)	82
AccII	CGCG	3 cut(s)	79, 92, 124
AciI	CCGC	4 cut(s)	54, 122, 171, 1344
AclWI	GGATC	1 cut(s)	1498
AcoI	YGGCCR	1 cut(s)	1269
AcsI	RAATTY	3 cut(s)	541, 751, 895
AcuI	CTGAAG	1 cut(s)	428
AdeI	CACNNNGTG	1 cut(s)	734
AfaI	GTAC	5 cut(s)	140, 367, 961, 1061, 1524
AfiI	CCNNNNNNNGG	3 cut(s)	258, 477, 832
AhlI	ACTAGT	1 cut(s)	1048
AjnI	CCWGG	2 cut(s)	1266, 1630
AjuI	GAANNNNNNNTTGG	2 cut(s)	1524, 1556
AleI	CACNNNNGTG	2 cut(s)	10, 347
Alw21I	GWGCWC	3 cut(s)	1090, 1678, 1763
Alw26I	GTCTC	3 cut(s)	323, 1523, 1551
AlwI	GGATC	1 cut(s)	1498
AlwNI	CAGNNNCTG	1 cut(s)	272
Ama87I	CYCGRG	1 cut(s)	1019
AoxI	GGCC	4 cut(s)	323, 1269, 1305, 1634
ApeKI	GCWGC	5 cut(s)	245, 248, 794, 953, 1802
ApoI	RAATTY	3 cut(s)	541, 751, 895
ArsI	GACNNNNNNTTYG	2 cut(s)	1501, 1533
Asp700I	GAANNNNTTC	1 cut(s)	588
AspLEI	GCGC	3 cut(s)	79, 94, 241
AspS9I	GGNCC	1 cut(s)	1634
AsuC2I	CCSGG	3 cut(s)	259, 827, 907
AsuHPI	GGTGA	4 cut(s)	746, 794, 1298, 1707
AsuNHI	GCTAGC	1 cut(s)	494
AvaI	CYCGRG	1 cut(s)	1019
BalI	TGGCCA	1 cut(s)	1271
BanII	GRGCYC	2 cut(s)	1678, 1763
BauI	CACGAG	2 cut(s)	343, 1762
BbsI	GAAGAC	1 cut(s)	1839
Bbv12I	GWGCWC	3 cut(s)	1090, 1678, 1763
BbvI	GCAGC	5 cut(s)	232, 260, 806, 965, 1814
BccI	CCATC	2 cut(s)	872, 1163
BcgI	CGANNNNNNTGC	2 cut(s)	487, 521
BciT130I	CCWGG	2 cut(s)	1268, 1632
BciVI	GTATCC	1 cut(s)	1634
BclI	TGATCA	1 cut(s)	1143
BcnI	CCSGG	3 cut(s)	259, 827, 907
BcoDI	GTCTC	3 cut(s)	323, 1523, 1551
BcuI	ACTAGT	1 cut(s)	1048
BfaI	CTAG	2 cut(s)	495, 1049
BfmI	CTRYAG	1 cut(s)	246
BfuAI	ACCTGC	2 cut(s)	947, 1801
BfuI	GTATCC	1 cut(s)	1634
BisI	GCNGC	6 cut(s)	172, 246, 249, 795, 954, 1803
BlpI	GCTNAGC	1 cut(s)	1757
BlsI	GCNGC	6 cut(s)	173, 247, 250, 796, 955, 1804
Bme1390I	CCNGG	5 cut(s)	259, 827, 907, 1268, 1632
BmeT110I	CYCGRG	1 cut(s)	1019
BmgT120I	GGNCC	1 cut(s)	1634
BmiI	GGNNCC	1 cut(s)	1419
BmrFI	CCNGG	5 cut(s)	259, 827, 907, 1268, 1632
BmsI	GCATC	5 cut(s)	175, 517, 592, 1434, 1816
BmtI	GCTAGC	1 cut(s)	498
BpiI	GAAGAC	1 cut(s)	1839
BpmI	CTGGAG	1 cut(s)	639
Bpu10I	CCTNAGC	2 cut(s)	68, 1638
Bpu1102I	GCTNAGC	1 cut(s)	1757
BpuEI	CTTGAG	3 cut(s)	392, 984, 1392
BpuMI	CCSGG	3 cut(s)	259, 827, 907
BsaBI	GATNNNNATC	1 cut(s)	438
BsaI	GGTCTC	1 cut(s)	1523
BsaJI	CCNNGG	1 cut(s)	1631
BsaXI	ACNNNNNCTCC	2 cut(s)	501, 531
Bsc4I	CCNNNNNNNGG	3 cut(s)	258, 477, 832
Bse1I	ACTGG	1 cut(s)	622
Bse3DI	GCAATG	1 cut(s)	290
Bse8I	GATNNNNATC	1 cut(s)	438
BseBI	CCWGG	2 cut(s)	1268, 1632
BseDI	CCNNGG	1 cut(s)	1631
BseGI	GGATG	6 cut(s)	468, 699, 883, 1126, 1770, 1872
BseJI	GATNNNNATC	1 cut(s)	438
BseLI	CCNNNNNNNGG	3 cut(s)	258, 477, 832
BseMI	GCAATG	1 cut(s)	290
BseMII	CTCAG	8 cut(s)	82, 334, 647, 1104, 1128, 1229, 1569, 1748
BseNI	ACTGG	1 cut(s)	622
BseRI	GAGGAG	1 cut(s)	1712
BseXI	GCAGC	5 cut(s)	232, 260, 806, 965, 1814
BseYI	CCCAGC	2 cut(s)	178, 857
BsgI	GTGCAG	1 cut(s)	1029
Bsh1236I	CGCG	3 cut(s)	79, 92, 124
BshFI	GGCC	4 cut(s)	325, 1271, 1307, 1636
BsiHKAI	GWGCWC	3 cut(s)	1090, 1678, 1763
BsiHKCI	CYCGRG	1 cut(s)	1019
BsiSI	CCGG	3 cut(s)	259, 827, 907
BslI	CCNNNNNNNGG	3 cut(s)	258, 477, 832
BsmAI	GTCTC	3 cut(s)	323, 1523, 1551
BsnI	GGCC	4 cut(s)	325, 1271, 1307, 1636
Bso31I	GGTCTC	1 cut(s)	1523
BsoBI	CYCGRG	1 cut(s)	1019
Bsp1286I	GDGCHC	3 cut(s)	1090, 1678, 1763
Bsp1407I	TGTACA	1 cut(s)	138
Bsp143I	GATC	2 cut(s)	1143, 1503
Bsp1720I	GCTNAGC	1 cut(s)	1757
BspACI	CCGC	4 cut(s)	54, 122, 171, 1344
BspANI	GGCC	4 cut(s)	325, 1271, 1307, 1636
BspCNI	CTCAG	8 cut(s)	81, 333, 646, 1105, 1129, 1230, 1568, 1749
BspFNI	CGCG	3 cut(s)	79, 92, 124
BspLI	GGNNCC	1 cut(s)	1419
BspMAI	CTGCAG	1 cut(s)	250
BspMI	ACCTGC	2 cut(s)	947, 1801
BspOI	GCTAGC	1 cut(s)	498
BspPI	GGATC	1 cut(s)	1498
BspTNI	GGTCTC	1 cut(s)	1523
BsrDI	GCAATG	1 cut(s)	290
BsrGI	TGTACA	1 cut(s)	138
BsrI	ACTGG	1 cut(s)	622
BssECI	CCNNGG	1 cut(s)	1631
BssMI	GATC	2 cut(s)	1143, 1503
BssSI	CACGAG	2 cut(s)	343, 1762
Bst2BI	CACGAG	2 cut(s)	343, 1762
Bst2UI	CCWGG	2 cut(s)	1268, 1632
Bst4CI	ACNGT	8 cut(s)	9, 115, 168, 1376, 1397, 1571, 1743, 1838
Bst6I	CTCTTC	1 cut(s)	1019
BstAUI	TGTACA	1 cut(s)	138
BstC8I	GCNNGC	6 cut(s)	176, 190, 243, 496, 1305, 1561
BstDEI	CTNAG	9 cut(s)	68, 320, 633, 1113, 1137, 1238, 1555, 1638, 1757
BstF5I	GGATG	6 cut(s)	468, 699, 883, 1126, 1770, 1872
BstFNI	CGCG	3 cut(s)	79, 92, 124
BstHHI	GCGC	3 cut(s)	79, 94, 241
BstKTI	GATC	2 cut(s)	1146, 1506
BstMAI	GTCTC	3 cut(s)	323, 1523, 1551
BstMBI	GATC	2 cut(s)	1143, 1503
BstMWI	GCNNNNNNNGC	6 cut(s)	245, 281, 1094, 1212, 1253, 1481
BstNI	CCWGG	2 cut(s)	1268, 1632
BstSCI	CCNGG	5 cut(s)	257, 825, 905, 1266, 1630
BstSFI	CTRYAG	1 cut(s)	246
BstUI	CGCG	3 cut(s)	79, 92, 124
BstV1I	GCAGC	5 cut(s)	232, 260, 806, 965, 1814
BstV2I	GAAGAC	1 cut(s)	1839
BstX2I	RGATCY	1 cut(s)	1503
BstXI	CCANNNNNNTGG	1 cut(s)	1514
BstYI	RGATCY	1 cut(s)	1503
BsuI	GTATCC	1 cut(s)	1634
BsuRI	GGCC	4 cut(s)	325, 1271, 1307, 1636
BtgZI	GCGATG	1 cut(s)	905
BtsCI	GGATG	6 cut(s)	468, 699, 883, 1126, 1770, 1872
BtsI	GCAGTG	3 cut(s)	270, 755, 1642
BtsIMutI	CAGTG	5 cut(s)	270, 755, 1576, 1642, 1843
BveI	ACCTGC	2 cut(s)	947, 1801
Cac8I	GCNNGC	6 cut(s)	176, 190, 243, 496, 1305, 1561
CaiI	CAGNNNCTG	1 cut(s)	272
CfoI	GCGC	3 cut(s)	79, 94, 241
Cfr13I	GGNCC	1 cut(s)	1634
CseI	GACGC	2 cut(s)	68, 1756
Csp6I	GTAC	5 cut(s)	139, 366, 960, 1060, 1523
CspCI	CAANNNNNGTGG	2 cut(s)	1552, 1587
CviQI	GTAC	5 cut(s)	139, 366, 960, 1060, 1523
DdeI	CTNAG	9 cut(s)	68, 320, 633, 1113, 1137, 1238, 1555, 1638, 1757
DpnI	GATC	2 cut(s)	1145, 1505
DpnII	GATC	2 cut(s)	1143, 1503
DraIII	CACNNNGTG	1 cut(s)	734
EaeI	YGGCCR	1 cut(s)	1269
Eam1104I	CTCTTC	1 cut(s)	1019
EarI	CTCTTC	1 cut(s)	1019
Ecl136II	GAGCTC	2 cut(s)	1676, 1761
Eco147I	AGGCCT	1 cut(s)	1307
Eco24I	GRGCYC	2 cut(s)	1678, 1763
Eco31I	GGTCTC	1 cut(s)	1523
Eco53kI	GAGCTC	2 cut(s)	1676, 1761
Eco57I	CTGAAG	1 cut(s)	428
Eco88I	CYCGRG	1 cut(s)	1019
EcoICRI	GAGCTC	2 cut(s)	1676, 1761
EcoRI	GAATTC	2 cut(s)	541, 751
EcoRII	CCWGG	2 cut(s)	1266, 1630
EcoT38I	GRGCYC	2 cut(s)	1678, 1763
FalI	AAGNNNNNCTT	2 cut(s)	1719, 1751
FauI	CCCGC	2 cut(s)	129, 1337
FbaI	TGATCA	1 cut(s)	1143
FblI	GTMKAC	1 cut(s)	82
Fnu4HI	GCNGC	6 cut(s)	172, 246, 249, 795, 954, 1803
FokI	GGATG	6 cut(s)	475, 686, 890, 1133, 1757, 1879
FriOI	GRGCYC	2 cut(s)	1678, 1763
Fsp4HI	GCNGC	6 cut(s)	172, 246, 249, 795, 954, 1803
FspBI	CTAG	2 cut(s)	495, 1049
GlaI	GCGC	3 cut(s)	78, 93, 240
GluI	GCNGC	6 cut(s)	172, 246, 249, 795, 954, 1803
GsaI	CCCAGC	2 cut(s)	182, 861
GsuI	CTGGAG	1 cut(s)	639
HaeIII	GGCC	4 cut(s)	325, 1271, 1307, 1636
HapII	CCGG	3 cut(s)	259, 827, 907
HgaI	GACGC	2 cut(s)	68, 1756
HhaI	GCGC	3 cut(s)	79, 94, 241
Hin6I	GCGC	3 cut(s)	77, 92, 239
HinP1I	GCGC	3 cut(s)	77, 92, 239
HincII	GTYRAC	3 cut(s)	83, 1225, 1463
HindII	GTYRAC	3 cut(s)	83, 1225, 1463
HindIII	AAGCTT	1 cut(s)	986
HinfI	GANTC	8 cut(s)	84, 423, 685, 1017, 1294, 1348, 1385, 1904
HpaII	CCGG	3 cut(s)	259, 827, 907
HphI	GGTGA	4 cut(s)	746, 794, 1298, 1707
Hpy166II	GTNNAC	5 cut(s)	17, 83, 639, 1225, 1463
Hpy188I	TCNGA	8 cut(s)	268, 447, 509, 868, 976, 1114, 1239, 1264
Hpy188III	TCNNGA	9 cut(s)	343, 371, 427, 1021, 1066, 1132, 1158, 1736, 1885
Hpy8I	GTNNAC	5 cut(s)	17, 83, 639, 1225, 1463
Hpy99I	CGWCG	2 cut(s)	84, 119
HpyAV	CCTTC	4 cut(s)	578, 880, 1111, 1606
HpyCH4III	ACNGT	8 cut(s)	9, 115, 168, 1376, 1397, 1571, 1743, 1838
HpyF10VI	GCNNNNNNNGC	6 cut(s)	245, 281, 1094, 1212, 1253, 1481
HpyF3I	CTNAG	9 cut(s)	68, 320, 633, 1113, 1137, 1238, 1555, 1638, 1757
HspAI	GCGC	3 cut(s)	77, 92, 239
Ksp22I	TGATCA	1 cut(s)	1143
Kzo9I	GATC	2 cut(s)	1143, 1503
LmnI	GCTCC	3 cut(s)	1244, 1417, 1699
Lsp1109I	GCAGC	5 cut(s)	232, 260, 806, 965, 1814
LweI	GCATC	5 cut(s)	175, 517, 592, 1434, 1816
MaeI	CTAG	2 cut(s)	495, 1049
MaeIII	GTNAC	3 cut(s)	782, 1534, 1713
MalI	GATC	2 cut(s)	1145, 1505
MboI	GATC	2 cut(s)	1143, 1503
MboII	GAAGA	8 cut(s)	434, 577, 983, 1036, 1183, 1490, 1739, 1844
MflI	RGATCY	1 cut(s)	1503
MhlI	GDGCHC	3 cut(s)	1090, 1678, 1763
MlsI	TGGCCA	1 cut(s)	1271
MluCI	AATT	5 cut(s)	541, 751, 895, 1182, 1603
MluNI	TGGCCA	1 cut(s)	1271
MlyI	GAGTC	3 cut(s)	78, 1011, 1357
MmeI	TCCRAC	3 cut(s)	1287, 1335, 1415
Mox20I	TGGCCA	1 cut(s)	1271
MroXI	GAANNNNTTC	1 cut(s)	588
MscI	TGGCCA	1 cut(s)	1271
MseI	TTAA	9 cut(s)	38, 810, 930, 1185, 1277, 1310, 1667, 1722, 1918
MslI	CAYNNNNRTG	2 cut(s)	10, 347
Msp20I	TGGCCA	1 cut(s)	1271
MspA1I	CMGCKG	1 cut(s)	474
MspI	CCGG	3 cut(s)	259, 827, 907
MspR9I	CCNGG	5 cut(s)	259, 827, 907, 1268, 1632
MvaI	CCWGG	2 cut(s)	1268, 1632
MvnI	CGCG	3 cut(s)	79, 92, 124
MwoI	GCNNNNNNNGC	6 cut(s)	245, 281, 1094, 1212, 1253, 1481
NciI	CCSGG	3 cut(s)	259, 827, 907
NdeII	GATC	2 cut(s)	1143, 1503
NheI	GCTAGC	1 cut(s)	494
NlaIV	GGNNCC	1 cut(s)	1419
NmuCI	GTSAC	2 cut(s)	782, 1713
OliI	CACNNNNGTG	2 cut(s)	10, 347
PaeR7I	CTCGAG	1 cut(s)	1019
PceI	AGGCCT	1 cut(s)	1307
PcsI	WCGNNNNNNNCGW	1 cut(s)	341
PdmI	GAANNNNTTC	1 cut(s)	588
PfeI	GAWTC	5 cut(s)	423, 685, 1294, 1385, 1904
PfoI	TCCNGGA	1 cut(s)	257
PkrI	GCNGC	6 cut(s)	173, 247, 250, 796, 955, 1804
PleI	GAGTC	3 cut(s)	78, 1011, 1356
PpsI	GAGTC	3 cut(s)	78, 1011, 1356
Psp124BI	GAGCTC	2 cut(s)	1678, 1763
Psp6I	CCWGG	2 cut(s)	1266, 1630
PspFI	CCCAGC	2 cut(s)	178, 857
PspGI	CCWGG	2 cut(s)	1266, 1630
PspN4I	GGNNCC	1 cut(s)	1419
PspPI	GGNCC	1 cut(s)	1634
PstI	CTGCAG	1 cut(s)	250
PstNI	CAGNNNCTG	1 cut(s)	272
PsuI	RGATCY	1 cut(s)	1503
PvuII	CAGCTG	1 cut(s)	474
RsaI	GTAC	5 cut(s)	140, 367, 961, 1061, 1524
RsaNI	GTAC	5 cut(s)	139, 366, 960, 1060, 1523
RseI	CAYNNNNRTG	2 cut(s)	10, 347
SacI	GAGCTC	2 cut(s)	1678, 1763
SalI	GTCGAC	1 cut(s)	81
SaqAI	TTAA	9 cut(s)	38, 810, 930, 1185, 1277, 1310, 1667, 1722, 1918
SatI	GCNGC	6 cut(s)	172, 246, 249, 795, 954, 1803
Sau3AI	GATC	2 cut(s)	1143, 1503
Sau96I	GGNCC	1 cut(s)	1634
SchI	GAGTC	3 cut(s)	78, 1011, 1357
ScrFI	CCNGG	5 cut(s)	259, 827, 907, 1268, 1632
SduI	GDGCHC	3 cut(s)	1090, 1678, 1763
SfaNI	GCATC	5 cut(s)	175, 517, 592, 1434, 1816
SfcI	CTRYAG	1 cut(s)	246
Sfr274I	CTCGAG	1 cut(s)	1019
SlaI	CTCGAG	1 cut(s)	1019
SmiMI	CAYNNNNRTG	2 cut(s)	10, 347
SmlI	CTYRAG	4 cut(s)	371, 999, 1019, 1407
SmoI	CTYRAG	4 cut(s)	371, 999, 1019, 1407
SpeI	ACTAGT	1 cut(s)	1048
Sse9I	AATT	5 cut(s)	541, 751, 895, 1182, 1603
SseBI	AGGCCT	1 cut(s)	1307
SsiI	CCGC	4 cut(s)	54, 122, 171, 1344
SspMI	CTAG	2 cut(s)	495, 1049
SstI	GAGCTC	2 cut(s)	1678, 1763
StuI	AGGCCT	1 cut(s)	1307
StyD4I	CCNGG	5 cut(s)	257, 825, 905, 1266, 1630
TaaI	ACNGT	8 cut(s)	9, 115, 168, 1376, 1397, 1571, 1743, 1838
TaqI	TCGA	7 cut(s)	82, 335, 545, 1020, 1442, 1672, 1678
TasI	AATT	5 cut(s)	541, 751, 895, 1182, 1603
TatI	WGTACW	3 cut(s)	138, 365, 1059
TauI	GCSGC	1 cut(s)	174
TfiI	GAWTC	5 cut(s)	423, 685, 1294, 1385, 1904
Tru1I	TTAA	9 cut(s)	38, 810, 930, 1185, 1277, 1310, 1667, 1722, 1918
Tru9I	TTAA	9 cut(s)	38, 810, 930, 1185, 1277, 1310, 1667, 1722, 1918
TscAI	CASTG	5 cut(s)	277, 762, 1576, 1649, 1843
TseFI	GTSAC	2 cut(s)	782, 1713
TseI	GCWGC	5 cut(s)	245, 248, 794, 953, 1802
Tsp45I	GTSAC	2 cut(s)	782, 1713
TspDTI	ATGAA	9 cut(s)	389, 581, 828, 908, 954, 983, 1625, 1740, 1787
TspGWI	ACGGA	1 cut(s)	1094
TspRI	CASTG	5 cut(s)	277, 762, 1576, 1649, 1843
XapI	RAATTY	3 cut(s)	541, 751, 895
XhoI	CTCGAG	1 cut(s)	1019
XmiI	GTMKAC	1 cut(s)	82
XmnI	GAANNNNTTC	1 cut(s)	588
XspI	CTAG	2 cut(s)	495, 1049

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.