Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006997.1

Orthogroup ID

OG0006654

Physical Location & Seq

Genomic Coordinates Forward (+)

12757 .. 15027

Gene Structure 2271 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1656 bp

atgctcaaaaaccaaccttttgacccaaacccctcagtttcagccaccacaactcaaccatggacctccgactcagtctcccaagtcctaacctccatccccagattcttcttccagtcccctcgctccgtaggtcgccaaaccggcttccggcaccgcgctccgttaaagcaacgccatctcaggcgagaaacatatgaattccacaacgacgtgcgcccagcagcggcccacagagacctcagcaaggtcaatctgggagtggacaaagccctcgatttttactactgggtcgaaacccatttcgggttcaaccacagtgagcgaacttgcagagacatggctgtcgttttggctaaagggaatcggttgaaggccctctgggattttctgaaagacatgtcgaagagagggagtggtgaaagccctcctcttgtaacgacacagtccatcacctgtttgatgaaatgcctaggagaagagggattggtcaatgaagcattggcggctttctataggatgaagcagtttcattgcaaaccggatgtgtatgcttacaacactattatttacgcgctttgcagggttggggatttcaagaaggctcggtttttgctggagcagatggagctgccgggttttagatgcccgccggatacattcacttacacgattttgataagctcttattgtagatatgggttggagactgggtgcaggaaggccactaggaggaggttgtgggaagcaaaccacatgtttcggaatatgctctttagagggtttgttcctgatgttgttacttacaatgctttgatcaatggttgttgcaagacttataggatagagagggcgttggagttgtttggggatatgaagaagagggattgtacccccaaccgggttacttatgattcgtttattagatactatgctgctgttaatgagattgacaaggctgtggatatgttaagaaggatgcagaatatgaatcatggattggccacttcaagttcgtatactccaatcattcatgccatgtgtgaagcaggaagggttacagaggcttggggttttcttgttgagttggttgatggagggtcaatacctagagaatatacttacaaattagtttgcaatgcaatgagttcagctggagaggtcagtttacttgatgatggcttgcgaaaaagaatagaagatggtatgcagaggagatataagcacgtaatgaaggtgaagccaataatgactcgcaaaggtttggctgttctgtataagggcaacaaggatggtgacgccaggtttctgtgcttcaaaatcttgtttgatgtgatgttaatttttcttaatgaacaatctgaagatgagcaagggtccaaagaattgcaatccatatccaatacaaactttcttcctctctaccctgccttgattgaagacgaagatccaatccccttgtacgcgcaaaagctgcttgtgatgctgattgattatagttacatcaaaattgcagacattctgcatctgaagatagtcttgcaatgctttgagtttttgctgggcgatctctcaagtgcaaatgtgaacaatgttatgctatgcctggctctgacatctgctcctgaaatggaaaccatgcaagttactttctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

551

Amino Acids

63.27

Weight (kDa)

8.77

Isoelectric Point (pI)

39.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	150 - 195	3.8e-09	PPR repeat family
PPR_1	PF12854	178 - 210	2.6e-09	PPR repeat
PPR_2	PF13041	181 - 232	5.2e-13	PPR repeat family
PPR_1	PF12854	216 - 234	9.4e-06	PPR repeat
PPR_2	PF13041	245 - 278	2.4e-08	PPR repeat family
PPR_3	PF13812	253 - 311	7.1e-12	Pentatricopeptide repeat domain
PPR_1	PF12854	260 - 293	2.5e-11	PPR repeat
PPR_2	PF13041	264 - 309	8.4e-17	PPR repeat family
PPR_long	PF17177	266 - 364	6.7e-08	Pentacotripeptide-repeat region of PRORP
PPR	PF01535	267 - 297	4.4e-09	PPR repeat
HEAT_ULK4	PF23606	421 - 504	2.1e-31	Serine/threonine-protein kinase ULK4-like, HEAT repeats
ARM_RUK	PF24970	511 - 547	9.7e-16	RUNKEL ARM-repeat domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006654)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77405
fragaria_vesca	FvH4_2g27550
malus_domestica	MD00G1030400.v1.1
prunus_persica	Prupe.1G492400_v2.0.a1
pyrus_communis	pycom15g30800
rosa_chinensis	RchiOBHm_Chr4g0420811 RchiOBHm_Chr4g0420821
rosa_laevigata	RLG00000007736 RLG00000011697
rosa_multiflora	Rmu_co8321563.1_g000001 Rmu_sc0005104.1_g000002 Rmu_sc0006997.1_g000002 Rmu_sc0006997.1_g000003
rosa_roxburghii	Rroxscaffold_5G00363250
rosa_rugosa	Rorug04G0166200 Rorug04G0166300 Rorug06G0261900
rosa_samantha	Rh4AG227600 Rh4BG230600 Rh4BG230700 Rh4BG230800 Rh4CG242600 Rh4CG242700 Rh6BG381400
rosa_wichuraiana	Rw4G019690 Rw6G032550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	344
AccB1I	GGYRCC	1 cut(s)	153
AccI	GTMKAC	1 cut(s)	1019
AccII	CGCG	3 cut(s)	159, 575, 1466
AciI	CCGC	4 cut(s)	157, 227, 506, 650
AclWI	GGATC	1 cut(s)	1442
AcoI	YGGCCR	1 cut(s)	1002
AcsI	RAATTY	1 cut(s)	200
AcuI	CTGAAG	2 cut(s)	1383, 1550
AcyI	GRCGYC	1 cut(s)	1299
AfaI	GTAC	2 cut(s)	892, 1463
AfiI	CCNNNNNNNGG	7 cut(s)	150, 226, 247, 306, 732, 900, 901
AflIII	ACRYGT	2 cut(s)	399, 756
AgsI	TTSAA	6 cut(s)	313, 373, 598, 1011, 1318, 1439
AjiI	CACGTC	1 cut(s)	214
AjnI	CCWGG	2 cut(s)	1301, 1605
AjuI	GAANNNNNNNTTGG	2 cut(s)	983, 1015
AluBI	AGCT	4 cut(s)	631, 684, 1154, 1474
AluI	AGCT	4 cut(s)	631, 684, 1154, 1474
Alw26I	GTCTC	4 cut(s)	82, 231, 330, 701
AlwI	GGATC	1 cut(s)	1442
AoxI	GGCC	4 cut(s)	228, 375, 723, 1002
ApeKI	GCWGC	4 cut(s)	224, 631, 935, 1474
ApoI	RAATTY	1 cut(s)	200
AspA2I	CCTAGG	1 cut(s)	472
AspLEI	GCGC	4 cut(s)	161, 219, 577, 1468
AspS9I	GGNCC	4 cut(s)	63, 229, 376, 1377
AsuC2I	CCSGG	2 cut(s)	636, 902
AsuHPI	GGTGA	4 cut(s)	431, 445, 1249, 1307
AvaII	GGWCC	2 cut(s)	63, 1377
AvrII	CCTAGG	1 cut(s)	472
BalI	TGGCCA	1 cut(s)	1004
BanI	GGYRCC	1 cut(s)	153
BbsI	GAAGAC	1 cut(s)	1446
BbvCI	CCTCAGC	1 cut(s)	242
BbvI	GCAGC	4 cut(s)	236, 618, 922, 1461
BccI	CCATC	8 cut(s)	104, 186, 458, 619, 1088, 1172, 1196, 1286
BciT130I	CCWGG	2 cut(s)	1303, 1607
BciVI	GTATCC	1 cut(s)	649
BclI	TGATCA	1 cut(s)	816
BcnI	CCSGG	2 cut(s)	636, 902
BcoDI	GTCTC	4 cut(s)	82, 231, 330, 701
BfaI	CTAG	3 cut(s)	473, 729, 1110
BfmI	CTRYAG	1 cut(s)	514
BfuI	GTATCC	1 cut(s)	649
BglI	GCCNNNNNGGC	1 cut(s)	144
BisI	GCNGC	6 cut(s)	225, 228, 507, 632, 936, 1475
BlnI	CCTAGG	1 cut(s)	472
BlsI	GCNGC	6 cut(s)	226, 229, 508, 633, 937, 1476
Bme1390I	CCNGG	4 cut(s)	636, 902, 1303, 1607
Bme18I	GGWCC	2 cut(s)	63, 1377
BmgBI	CACGTC	1 cut(s)	214
BmgT120I	GGNCC	4 cut(s)	63, 229, 376, 1377
BmiI	GGNNCC	2 cut(s)	155, 1378
BmrFI	CCNGG	4 cut(s)	636, 902, 1303, 1607
BmrI	ACTGGG	2 cut(s)	298, 720
BmsI	GCATC	4 cut(s)	635, 969, 1473, 1534
BmuI	ACTGGG	2 cut(s)	298, 720
BpiI	GAAGAC	1 cut(s)	1446
BpmI	CTGGAG	2 cut(s)	638, 1176
Bpu10I	CCTNAGC	1 cut(s)	242
BpuEI	CTTGAG	1 cut(s)	1558
BpuMI	CCSGG	2 cut(s)	636, 902
BsaAI	YACGTR	1 cut(s)	1228
BsaHI	GRCGYC	1 cut(s)	1299
BsaI	GGTCTC	1 cut(s)	231
BsaJI	CCNNGG	2 cut(s)	59, 472
BsaWI	WCCGGW	1 cut(s)	541
BsaXI	ACNNNNNCTCC	6 cut(s)	62, 92, 698, 728, 1606, 1636
Bsc4I	CCNNNNNNNGG	7 cut(s)	150, 226, 247, 306, 732, 900, 901
Bse118I	RCCGGY	1 cut(s)	143
Bse1I	ACTGG	3 cut(s)	115, 293, 715
Bse3DI	GCAATG	4 cut(s)	532, 1144, 1149, 1550
BseBI	CCWGG	2 cut(s)	1303, 1607
BseDI	CCNNGG	2 cut(s)	59, 472
BseGI	GGATG	5 cut(s)	96, 525, 550, 984, 1297
BseLI	CCNNNNNNNGG	7 cut(s)	150, 226, 247, 306, 732, 900, 901
BseMI	GCAATG	4 cut(s)	532, 1144, 1149, 1550
BseMII	CTCAG	4 cut(s)	48, 87, 196, 256
BseNI	ACTGG	3 cut(s)	115, 293, 715
BseRI	GAGGAG	3 cut(s)	420, 748, 1228
BseXI	GCAGC	4 cut(s)	236, 618, 922, 1461
BseYI	CCCAGC	2 cut(s)	220, 1561
BsgI	GTGCAG	1 cut(s)	736
Bsh1236I	CGCG	3 cut(s)	159, 575, 1466
BshFI	GGCC	4 cut(s)	230, 377, 725, 1004
BshNI	GGYRCC	1 cut(s)	153
BsiSI	CCGG	6 cut(s)	144, 151, 542, 635, 653, 901
BslFI	GGGAC	1 cut(s)	103
BslI	CCNNNNNNNGG	7 cut(s)	150, 226, 247, 306, 732, 900, 901
BsmAI	GTCTC	4 cut(s)	82, 231, 330, 701
BsmFI	GGGAC	1 cut(s)	103
BsnI	GGCC	4 cut(s)	230, 377, 725, 1004
Bso31I	GGTCTC	1 cut(s)	231
Bsp143I	GATC	3 cut(s)	816, 1447, 1567
Bsp19I	CCATGG	1 cut(s)	59
BspACI	CCGC	4 cut(s)	157, 227, 506, 650
BspANI	GGCC	4 cut(s)	230, 377, 725, 1004
BspCNI	CTCAG	4 cut(s)	47, 86, 195, 255
BspFNI	CGCG	3 cut(s)	159, 575, 1466
BspLI	GGNNCC	2 cut(s)	155, 1378
BspPI	GGATC	1 cut(s)	1442
BspT107I	GGYRCC	1 cut(s)	153
BspTNI	GGTCTC	1 cut(s)	231
BsrDI	GCAATG	4 cut(s)	532, 1144, 1149, 1550
BsrFI	RCCGGY	1 cut(s)	143
BsrI	ACTGG	3 cut(s)	115, 293, 715
BssAI	RCCGGY	1 cut(s)	143
BssECI	CCNNGG	2 cut(s)	59, 472
BssMI	GATC	3 cut(s)	816, 1447, 1567
BssNAI	GTATAC	1 cut(s)	1020
BssNI	GRCGYC	1 cut(s)	1299
BssT1I	CCWWGG	2 cut(s)	59, 472
Bst1107I	GTATAC	1 cut(s)	1020
Bst2UI	CCWGG	2 cut(s)	1303, 1607
Bst4CI	ACNGT	2 cut(s)	320, 447
Bst6I	CTCTTC	3 cut(s)	401, 474, 875
BstACI	GRCGYC	1 cut(s)	1299
BstAPI	GCANNNNNTGC	1 cut(s)	1474
BstBAI	YACGTR	1 cut(s)	1228
BstC8I	GCNNGC	2 cut(s)	650, 1184
BstDEI	CTNAG	4 cut(s)	34, 73, 182, 242
BstDSI	CCRYGG	1 cut(s)	59
BstENI	CCTNNNNNAGG	1 cut(s)	245
BstF5I	GGATG	5 cut(s)	96, 525, 550, 984, 1297
BstFNI	CGCG	3 cut(s)	159, 575, 1466
BstHHI	GCGC	4 cut(s)	161, 219, 577, 1468
BstKTI	GATC	3 cut(s)	819, 1450, 1570
BstMAI	GTCTC	4 cut(s)	82, 231, 330, 701
BstMBI	GATC	3 cut(s)	816, 1447, 1567
BstMWI	GCNNNNNNNGC	5 cut(s)	144, 506, 628, 1474, 1483
BstNI	CCWGG	2 cut(s)	1303, 1607
BstNSI	RCATGY	2 cut(s)	403, 760
BstSCI	CCNGG	4 cut(s)	634, 900, 1301, 1605
BstSFI	CTRYAG	1 cut(s)	514
BstUI	CGCG	3 cut(s)	159, 575, 1466
BstV1I	GCAGC	4 cut(s)	236, 618, 922, 1461
BstV2I	GAAGAC	1 cut(s)	1446
BstX2I	RGATCY	1 cut(s)	1447
BstYI	RGATCY	1 cut(s)	1447
BstZ17I	GTATAC	1 cut(s)	1020
BsuI	GTATCC	1 cut(s)	649
BsuRI	GGCC	4 cut(s)	230, 377, 725, 1004
BtgI	CCRYGG	1 cut(s)	59
BtrI	CACGTC	1 cut(s)	214
BtsCI	GGATG	5 cut(s)	96, 525, 550, 984, 1297
BtsIMutI	CAGTG	1 cut(s)	325
Cac8I	GCNNGC	2 cut(s)	650, 1184
CfoI	GCGC	4 cut(s)	161, 219, 577, 1468
Cfr10I	RCCGGY	1 cut(s)	143
Cfr13I	GGNCC	4 cut(s)	63, 229, 376, 1377
CseI	GACGC	1 cut(s)	1307
Csp6I	GTAC	2 cut(s)	891, 1462
CviAII	CATG	8 cut(s)	60, 340, 400, 757, 995, 1034, 1039, 1639
CviQI	GTAC	2 cut(s)	891, 1462
DdeI	CTNAG	4 cut(s)	34, 73, 182, 242
DpnI	GATC	3 cut(s)	818, 1449, 1569
DpnII	GATC	3 cut(s)	816, 1447, 1567
DrdI	GACNNNNNNGTC	1 cut(s)	344
DseDI	GACNNNNNNGTC	1 cut(s)	344
EaeI	YGGCCR	1 cut(s)	1002
Eam1104I	CTCTTC	3 cut(s)	401, 474, 875
EarI	CTCTTC	3 cut(s)	401, 474, 875
Eco130I	CCWWGG	2 cut(s)	59, 472
Eco31I	GGTCTC	1 cut(s)	231
Eco47I	GGWCC	2 cut(s)	63, 1377
Eco57I	CTGAAG	2 cut(s)	1383, 1550
EcoNI	CCTNNNNNAGG	1 cut(s)	245
EcoO109I	RGGNCCY	1 cut(s)	376
EcoRI	GAATTC	1 cut(s)	200
EcoRII	CCWGG	2 cut(s)	1301, 1605
EcoT14I	CCWWGG	2 cut(s)	59, 472
ErhI	CCWWGG	2 cut(s)	59, 472
FaeI	CATG	8 cut(s)	63, 343, 403, 760, 998, 1037, 1042, 1642
FalI	AAGNNNNNCTT	2 cut(s)	1523, 1555
FaqI	GGGAC	1 cut(s)	103
FatI	CATG	8 cut(s)	59, 339, 399, 756, 994, 1033, 1038, 1638
FauI	CCCGC	1 cut(s)	657
FauNDI	CATATG	1 cut(s)	196
FbaI	TGATCA	1 cut(s)	816
FblI	GTMKAC	1 cut(s)	1019
Fnu4HI	GCNGC	6 cut(s)	225, 228, 507, 632, 936, 1475
FokI	GGATG	5 cut(s)	83, 532, 557, 991, 1304
Fsp4HI	GCNGC	6 cut(s)	225, 228, 507, 632, 936, 1475
FspBI	CTAG	3 cut(s)	473, 729, 1110
GlaI	GCGC	4 cut(s)	160, 218, 576, 1467
GluI	GCNGC	6 cut(s)	225, 228, 507, 632, 936, 1475
GsaI	CCCAGC	2 cut(s)	224, 1565
GsuI	CTGGAG	2 cut(s)	638, 1176
HaeIII	GGCC	4 cut(s)	230, 377, 725, 1004
HapII	CCGG	6 cut(s)	144, 151, 542, 635, 653, 901
HgaI	GACGC	1 cut(s)	1307
HhaI	GCGC	4 cut(s)	161, 219, 577, 1468
Hin1I	GRCGYC	1 cut(s)	1299
Hin1II	CATG	8 cut(s)	63, 343, 403, 760, 998, 1037, 1042, 1642
Hin6I	GCGC	4 cut(s)	159, 217, 575, 1466
HinP1I	GCGC	4 cut(s)	159, 217, 575, 1466
HinfI	GANTC	6 cut(s)	71, 105, 364, 914, 991, 1252
HpaII	CCGG	6 cut(s)	144, 151, 542, 635, 653, 901
HphI	GGTGA	4 cut(s)	431, 445, 1249, 1307
Hpy166II	GTNNAC	4 cut(s)	265, 1020, 1169, 1588
Hpy188I	TCNGA	7 cut(s)	70, 393, 765, 1363, 1530, 1614, 1655
Hpy188III	TCNNGA	3 cut(s)	598, 791, 1625
Hpy8I	GTNNAC	4 cut(s)	265, 1020, 1169, 1588
Hpy99I	CGWCG	1 cut(s)	215
HpyAV	CCTTC	6 cut(s)	367, 595, 715, 969, 1047, 1228
HpyCH4III	ACNGT	2 cut(s)	320, 447
HpyCH4IV	ACGT	2 cut(s)	213, 1227
HpyF10VI	GCNNNNNNNGC	5 cut(s)	144, 506, 628, 1474, 1483
HpyF3I	CTNAG	4 cut(s)	34, 73, 182, 242
HpySE526I	ACGT	2 cut(s)	213, 1227
Hsp92I	GRCGYC	1 cut(s)	1299
Hsp92II	CATG	8 cut(s)	63, 343, 403, 760, 998, 1037, 1042, 1642
HspAI	GCGC	4 cut(s)	159, 217, 575, 1466
Ksp22I	TGATCA	1 cut(s)	816
Kzo9I	GATC	3 cut(s)	816, 1447, 1567
LmnI	GCTCC	5 cut(s)	131, 166, 619, 628, 1627
Lsp1109I	GCAGC	4 cut(s)	236, 618, 922, 1461
LweI	GCATC	4 cut(s)	635, 969, 1473, 1534
MaeI	CTAG	3 cut(s)	473, 729, 1110
MaeII	ACGT	2 cut(s)	213, 1227
MaeIII	GTNAC	7 cut(s)	436, 799, 904, 1057, 1295, 1499, 1645
MalI	GATC	3 cut(s)	818, 1449, 1569
MboI	GATC	3 cut(s)	816, 1447, 1567
MflI	RGATCY	1 cut(s)	1447
MlsI	TGGCCA	1 cut(s)	1004
MluCI	AATT	5 cut(s)	200, 1127, 1341, 1385, 1509
MluNI	TGGCCA	1 cut(s)	1004
MlyI	GAGTC	2 cut(s)	65, 1246
MmeI	TCCRAC	3 cut(s)	93, 684, 837
Mox20I	TGGCCA	1 cut(s)	1004
MscI	TGGCCA	1 cut(s)	1004
MseI	TTAA	5 cut(s)	167, 942, 971, 1340, 1350
Msp20I	TGGCCA	1 cut(s)	1004
MspA1I	CMGCKG	2 cut(s)	227, 1154
MspI	CCGG	6 cut(s)	144, 151, 542, 635, 653, 901
MspR9I	CCNGG	4 cut(s)	636, 902, 1303, 1607
MvaI	CCWGG	2 cut(s)	1303, 1607
MvnI	CGCG	3 cut(s)	159, 575, 1466
MwoI	GCNNNNNNNGC	5 cut(s)	144, 506, 628, 1474, 1483
NciI	CCSGG	2 cut(s)	636, 902
NcoI	CCATGG	1 cut(s)	59
NdeI	CATATG	1 cut(s)	196
NdeII	GATC	3 cut(s)	816, 1447, 1567
NlaIII	CATG	8 cut(s)	63, 343, 403, 760, 998, 1037, 1042, 1642
NlaIV	GGNNCC	2 cut(s)	155, 1378
NmuCI	GTSAC	1 cut(s)	1295
NspI	RCATGY	2 cut(s)	403, 760
PciI	ACATGT	2 cut(s)	399, 756
PfeI	GAWTC	4 cut(s)	105, 364, 914, 991
PflFI	GACNNNGTC	2 cut(s)	74, 445
PkrI	GCNGC	6 cut(s)	226, 229, 508, 633, 937, 1476
PleI	GAGTC	2 cut(s)	65, 1246
PpsI	GAGTC	2 cut(s)	65, 1246
Ppu21I	YACGTR	1 cut(s)	1228
PscI	ACATGT	2 cut(s)	399, 756
Psp6I	CCWGG	2 cut(s)	1301, 1605
PspFI	CCCAGC	2 cut(s)	220, 1561
PspGI	CCWGG	2 cut(s)	1301, 1605
PspN4I	GGNNCC	2 cut(s)	155, 1378
PspPI	GGNCC	4 cut(s)	63, 229, 376, 1377
PsuI	RGATCY	1 cut(s)	1447
PsyI	GACNNNGTC	2 cut(s)	74, 445
PvuII	CAGCTG	1 cut(s)	1154
RsaI	GTAC	2 cut(s)	892, 1463
RsaNI	GTAC	2 cut(s)	891, 1462
SaqAI	TTAA	5 cut(s)	167, 942, 971, 1340, 1350
SatI	GCNGC	6 cut(s)	225, 228, 507, 632, 936, 1475
Sau3AI	GATC	3 cut(s)	816, 1447, 1567
Sau96I	GGNCC	4 cut(s)	63, 229, 376, 1377
SchI	GAGTC	2 cut(s)	65, 1246
ScrFI	CCNGG	4 cut(s)	636, 902, 1303, 1607
SfaNI	GCATC	4 cut(s)	635, 969, 1473, 1534
SfcI	CTRYAG	1 cut(s)	514
SinI	GGWCC	2 cut(s)	63, 1377
SmlI	CTYRAG	1 cut(s)	1573
SmoI	CTYRAG	1 cut(s)	1573
Sse9I	AATT	5 cut(s)	200, 1127, 1341, 1385, 1509
SsiI	CCGC	4 cut(s)	157, 227, 506, 650
SspMI	CTAG	3 cut(s)	473, 729, 1110
StyD4I	CCNGG	4 cut(s)	634, 900, 1301, 1605
StyI	CCWWGG	2 cut(s)	59, 472
TaaI	ACNGT	2 cut(s)	320, 447
TaiI	ACGT	2 cut(s)	216, 1230
TaqI	TCGA	3 cut(s)	276, 294, 404
TasI	AATT	5 cut(s)	200, 1127, 1341, 1385, 1509
TauI	GCSGC	2 cut(s)	230, 509
TfiI	GAWTC	4 cut(s)	105, 364, 914, 991
Tru1I	TTAA	5 cut(s)	167, 942, 971, 1340, 1350
Tru9I	TTAA	5 cut(s)	167, 942, 971, 1340, 1350
TscAI	CASTG	1 cut(s)	325
TseFI	GTSAC	1 cut(s)	1295
TseI	GCWGC	4 cut(s)	224, 631, 935, 1474
Tsp45I	GTSAC	1 cut(s)	1295
TspGWI	ACGGA	2 cut(s)	118, 153
TspRI	CASTG	1 cut(s)	325
Tth111I	GACNNNGTC	2 cut(s)	74, 445
VpaK11BI	GGWCC	2 cut(s)	63, 1377
XagI	CCTNNNNNAGG	1 cut(s)	245
XapI	RAATTY	1 cut(s)	200
XceI	RCATGY	2 cut(s)	403, 760
XmaJI	CCTAGG	1 cut(s)	472
XmiI	GTMKAC	1 cut(s)	1019
XspI	CTAG	3 cut(s)	473, 729, 1110

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.