Rmu_ssc0000042.1_g000043

Ribosomal protein-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000042.1
OG0006968
Physical Location & Seq
Forward (+)
261803 .. 268791
6989 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2028 bp
atgcttgcgtacggtgcagttgctgatcaatgtgatgaaatcactagaatgggagcttctacagcgctgaaatgtctgaagaagttatgtaggcaagtcaagtttctttactctgggtggttccttcgtcctccaaattctgttgacttatataggcttctcaatagaggacaacgtcgtgggtttctaggcatgattgggagcatcgattgcatgcattgggagtggaagaattgcctaactggctgggctggagctttctcgggtcgaaagggtagactaactattattcttgaagctgtggcgtcttacgatacgcatatatggcatgctttctttggaacccctggagctcaaaatgacctcaacgttcttggtgcatctaatgtgttcgagcgtgtcataagtggaactgctcatctggttgagtttgaggtagagttggcctacctccacaaatgcctacaagatgatttggtgatgcacaactggaacatggatgataaatctaaaggttataaattatattctgctaatcattcacctagaatttttgaaacacatcaagtaactgtaactggtcatgtaactgaccatgtcactgaccaagtaactgtaactggtcacgtaactgaccatgtcactgttactggtcacttttgggctgatctgagtttggatcagtatactagtgatgtggattctctggggaggatggatgcgagggtgggtattggtgttcgatctgtggattgtggtggtgatcgcatctttggtggtcgctgcgttgattcttcaggttggctttcttgggatcacttagcttcgatggtgctgatggtggatcggtcttgctcagcgacagatctgagttattatggtgatggcggggtattatcggacattgctggtgggttattgttatggcttgccttgggatcggcaacggaagtgatcctggggacggcggcggttttggccttattggtggcggcggcattgctgggacagaggtctctagggcttctccaagctggtcgtcacactgatcatcgcacagattccaccgatcatcacacagatagccatcgtcctactgatcatcacatagatttcaaggatcatcacatagatagcaattgtccagctgatcatcacatagatttcaccgattcactgtgcaccgccgatcttcaacccttgatcttccactccacatgcaaaatcgtccctcaaggcgggtatgaggatgatcagaaggaggaggagattccaaaaccaagaaggatcggccgagacgtcgtcgaaaaagtggatttcctgtctggtcaggctacgcgccactgttcacatatgcgatttccacttttcggtgaaccattgtgcaaaccaacaccacagagcaaagcacgaggctggtctgagtcatttccggcttgtcccgtcgtcggaggtgagagaaccagtcgggtcaggtcggcgggtttctgtcgggtctgggttgggcgaaggagagagaacagacagaagggagagtttccgaaaaaggaaatgagattttatgaaaatattttcggaaattccttatttataccaaaatggaaacttcttccaatggccataacttcttcattcgaactccgatcttcacgttcctcttgtccacgaactcgtatcgacgcgctgtacaactttcgtgaaggaagttttcagagaatcccaacaaataaaaagtttgctgtgggaaaacaagtggtggtttgggggactagatggagaattggagatggaaggagggtgagcattatggctgataaacggttacctagcccagcaagcttcaagattgtaacacattttaattggccagtccaacaaaaggtggagtctctctttaccgagagcgttcttgataaattggtgtggcattacaccaaaaatggtgtctacaatgtgatgtccgcatattgggcagcaaggagttacaaaaccgaaaacgtggttctgagcaagttcaagctacaatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Plant_tran

Protein Analysis

675

Amino Acids

75.93

Weight (kDa)

8.7

Isoelectric Point (pI)

40.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Plant_tran PF04827 41 - 147 5.1e-38 Plant transposon protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 519
AatII GACGTC 1 cut(s) 1302
AccI GTMKAC 3 cut(s) 277, 686, 1947
AccII CGCG 2 cut(s) 1339, 1682
AciI CCGC 9 cut(s) 888, 968, 971, 992, 995, 1185, 1239, 1481, 1962
AclI AACGTT 1 cut(s) 369
AclWI GGATC 7 cut(s) 687, 822, 852, 946, 949, 1128, 1295
AcoI YGGCCR 3 cut(s) 1291, 1617, 1865
AcsI RAATTY 3 cut(s) 136, 549, 1579
AcuI CTGAAG 2 cut(s) 98, 780
AcyI GRCGYC 2 cut(s) 305, 1299
AfaI GTAC 2 cut(s) 11, 1688
AfeI AGCGCT 1 cut(s) 66
AfiI CCNNNNNNNGG 6 cut(s) 964, 1238, 1370, 1448, 1879, 1968
AgsI TTSAA 6 cut(s) 296, 557, 1117, 1196, 1843, 2017
AhlI ACTAGT 1 cut(s) 689
AjnI CCWGG 2 cut(s) 346, 957
AluBI AGCT 9 cut(s) 56, 257, 299, 353, 824, 1034, 1148, 1839, 2020
AluI AGCT 9 cut(s) 56, 257, 299, 353, 824, 1034, 1148, 1839, 2020
Alw21I GWGCWC 2 cut(s) 355, 1184
Alw26I GTCTC 3 cut(s) 1020, 1290, 1893
Alw44I GTGCAC 1 cut(s) 1180
AlwI GGATC 7 cut(s) 687, 822, 852, 946, 949, 1128, 1295
AlwNI CAGNNNCTG 1 cut(s) 23
Ama87I CYCGRG 1 cut(s) 262
Aor51HI AGCGCT 1 cut(s) 66
AoxI GGCC 5 cut(s) 444, 978, 1291, 1617, 1865
ApaLI GTGCAC 1 cut(s) 1180
ApeKI GCWGC 2 cut(s) 783, 1973
ApoI RAATTY 3 cut(s) 136, 549, 1579
ArsI GACNNNNNNTTYG 2 cut(s) 1929, 1961
AspLEI GCGC 3 cut(s) 67, 1341, 1684
AsuHPI GGTGA 8 cut(s) 490, 534, 773, 893, 1159, 1385, 1466, 1810
AsuII TTCGAA 1 cut(s) 1635
AvaI CYCGRG 1 cut(s) 262
BaeGI GKGCMC 1 cut(s) 1184
BalI TGGCCA 2 cut(s) 1619, 1867
BanII GRGCYC 1 cut(s) 355
BauI CACGAG 1 cut(s) 1410
Bbv12I GWGCWC 2 cut(s) 355, 1184
BbvI GCAGC 2 cut(s) 770, 1985
BccI CCATC 7 cut(s) 709, 823, 832, 878, 1095, 1767, 1781
BceAI ACGGC 1 cut(s) 981
BciT130I CCWGG 2 cut(s) 348, 959
BclI TGATCA 5 cut(s) 25, 1048, 1099, 1150, 1252
BcoDI GTCTC 3 cut(s) 1020, 1290, 1893
BcuI ACTAGT 1 cut(s) 689
BfaI CTAG 7 cut(s) 45, 188, 546, 690, 1019, 1770, 1827
BfmI CTRYAG 1 cut(s) 60
BfoI RGCGCY 1 cut(s) 68
BglI GCCNNNNNGGC 1 cut(s) 243
BglII AGATCT 1 cut(s) 865
BisI GCNGC 5 cut(s) 784, 969, 993, 996, 1974
BlpI GCTNAGC 1 cut(s) 856
BlsI GCNGC 5 cut(s) 785, 970, 994, 997, 1975
Bme1390I CCNGG 2 cut(s) 348, 959
BmeT110I CYCGRG 1 cut(s) 262
BmiI GGNNCC 2 cut(s) 122, 343
BmrFI CCNGG 2 cut(s) 348, 959
BmsI GCATC 5 cut(s) 213, 389, 471, 709, 777
BoxI GACNNNNGTC 1 cut(s) 1012
BpmI CTGGAG 2 cut(s) 273, 369
Bpu1102I GCTNAGC 1 cut(s) 856
Bpu14I TTCGAA 1 cut(s) 1635
BpuEI CTTGAG 1 cut(s) 1218
Bsa29I ATCGAT 1 cut(s) 207
BsaAI YACGTR 1 cut(s) 628
BsaBI GATNNNNATC 1 cut(s) 1086
BsaHI GRCGYC 2 cut(s) 305, 1299
BsaI GGTCTC 1 cut(s) 1020
BsaJI CCNNGG 3 cut(s) 346, 933, 958
Bsc4I CCNNNNNNNGG 6 cut(s) 964, 1238, 1370, 1448, 1879, 1968
Bse1I ACTGG 7 cut(s) 247, 494, 583, 625, 655, 1464, 1868
Bse3DI GCAATG 2 cut(s) 903, 998
Bse8I GATNNNNATC 1 cut(s) 1086
BseBI CCWGG 2 cut(s) 348, 959
BseCI ATCGAT 1 cut(s) 207
BseDI CCNNGG 3 cut(s) 346, 933, 958
BseGI GGATG 4 cut(s) 505, 720, 724, 1255
BseJI GATNNNNATC 1 cut(s) 1086
BseLI CCNNNNNNNGG 6 cut(s) 964, 1238, 1370, 1448, 1879, 1968
BseMI GCAATG 2 cut(s) 903, 998
BseMII CTCAG 5 cut(s) 662, 860, 870, 1413, 1997
BseNI ACTGG 7 cut(s) 247, 494, 583, 625, 655, 1464, 1868
BseRI GAGGAG 2 cut(s) 1277, 1280
BseSI GKGCMC 1 cut(s) 1184
BseX3I CGGCCG 1 cut(s) 1291
BseXI GCAGC 2 cut(s) 770, 1985
BseYI CCCAGC 3 cut(s) 246, 1003, 1831
BsgI GTGCAG 1 cut(s) 36
Bsh1236I CGCG 2 cut(s) 1339, 1682
Bsh1285I CGRYCG 1 cut(s) 1294
BshFI GGCC 5 cut(s) 446, 980, 1293, 1619, 1867
BshVI ATCGAT 1 cut(s) 207
BsiEI CGRYCG 1 cut(s) 1294
BsiHKAI GWGCWC 2 cut(s) 355, 1184
BsiHKCI CYCGRG 1 cut(s) 262
BsiSI CCGG 1 cut(s) 1433
BsiWI CGTACG 1 cut(s) 9
BslFI GGGAC 5 cut(s) 976, 1020, 1214, 1425, 1780
BslI CCNNNNNNNGG 6 cut(s) 964, 1238, 1370, 1448, 1879, 1968
BsmAI GTCTC 3 cut(s) 1020, 1290, 1893
BsmBI CGTCTC 1 cut(s) 1290
BsmFI GGGAC 5 cut(s) 976, 1020, 1214, 1425, 1780
BsnI GGCC 5 cut(s) 446, 980, 1293, 1619, 1867
Bso31I GGTCTC 1 cut(s) 1020
BsoBI CYCGRG 1 cut(s) 262
Bsp119I TTCGAA 1 cut(s) 1635
Bsp1286I GDGCHC 2 cut(s) 355, 1184
Bsp1407I TGTACA 1 cut(s) 1686
Bsp1720I GCTNAGC 1 cut(s) 856
BspACI CCGC 9 cut(s) 888, 968, 971, 992, 995, 1185, 1239, 1481, 1962
BspANI GGCC 5 cut(s) 446, 980, 1293, 1619, 1867
BspCNI CTCAG 5 cut(s) 663, 861, 869, 1414, 1998
BspDI ATCGAT 1 cut(s) 207
BspFNI CGCG 2 cut(s) 1339, 1682
BspLI GGNNCC 2 cut(s) 122, 343
BspPI GGATC 7 cut(s) 687, 822, 852, 946, 949, 1128, 1295
BspT104I TTCGAA 1 cut(s) 1635
BspTNI GGTCTC 1 cut(s) 1020
BsrDI GCAATG 2 cut(s) 903, 998
BsrGI TGTACA 1 cut(s) 1686
BsrI ACTGG 7 cut(s) 247, 494, 583, 625, 655, 1464, 1868
BssECI CCNNGG 3 cut(s) 346, 933, 958
BssNAI GTATAC 1 cut(s) 687
BssNI GRCGYC 2 cut(s) 305, 1299
BssSI CACGAG 1 cut(s) 1410
BssT1I CCWWGG 1 cut(s) 933
Bst1107I GTATAC 1 cut(s) 687
Bst2BI CACGAG 1 cut(s) 1410
Bst2UI CCWGG 2 cut(s) 348, 959
Bst4CI ACNGT 7 cut(s) 14, 574, 616, 646, 1179, 1346, 1821
BstACI GRCGYC 2 cut(s) 305, 1299
BstAPI GCANNNNNTGC 1 cut(s) 210
BstAUI TGTACA 1 cut(s) 1686
BstBAI YACGTR 1 cut(s) 628
BstBI TTCGAA 1 cut(s) 1635
BstC8I GCNNGC 5 cut(s) 6, 215, 330, 930, 1837
BstDEI CTNAG 6 cut(s) 671, 820, 856, 869, 1422, 2006
BstEII GGTNACC 1 cut(s) 1821
BstF5I GGATG 4 cut(s) 505, 720, 724, 1255
BstFNI CGCG 2 cut(s) 1339, 1682
BstH2I RGCGCY 1 cut(s) 68
BstHHI GCGC 3 cut(s) 67, 1341, 1684
BstMAI GTCTC 3 cut(s) 1020, 1290, 1893
BstMCI CGRYCG 1 cut(s) 1294
BstMWI GCNNNNNNNGC 8 cut(s) 14, 62, 210, 243, 325, 977, 1836, 1970
BstNI CCWGG 2 cut(s) 348, 959
BstNSI RCATGY 3 cut(s) 217, 332, 1221
BstPAI GACNNNNGTC 1 cut(s) 1012
BstPI GGTNACC 1 cut(s) 1821
BstSCI CCNGG 2 cut(s) 346, 957
BstSFI CTRYAG 1 cut(s) 60
BstSLI GKGCMC 1 cut(s) 1184
BstUI CGCG 2 cut(s) 1339, 1682
BstV1I GCAGC 2 cut(s) 770, 1985
BstX2I RGATCY 1 cut(s) 865
BstYI RGATCY 1 cut(s) 865
BstZ17I GTATAC 1 cut(s) 687
BstZI CGGCCG 1 cut(s) 1291
Bsu15I ATCGAT 1 cut(s) 207
BsuRI GGCC 5 cut(s) 446, 980, 1293, 1619, 1867
BsuTUI ATCGAT 1 cut(s) 207
BtgZI GCGATG 1 cut(s) 1037
BtsCI GGATG 4 cut(s) 505, 720, 724, 1255
BtsIMutI CAGTG 5 cut(s) 600, 642, 1044, 1175, 1342
Cac8I GCNNGC 5 cut(s) 6, 215, 330, 930, 1837
CaiI CAGNNNCTG 1 cut(s) 23
CfoI GCGC 3 cut(s) 67, 1341, 1684
ClaI ATCGAT 1 cut(s) 207
CseI GACGC 2 cut(s) 294, 1688
Csp6I GTAC 2 cut(s) 10, 1687
CviAII CATG 8 cut(s) 193, 214, 329, 496, 584, 596, 638, 1218
CviQI GTAC 2 cut(s) 10, 1687
DdeI CTNAG 6 cut(s) 671, 820, 856, 869, 1422, 2006
EaeI YGGCCR 3 cut(s) 1291, 1617, 1865
EagI CGGCCG 1 cut(s) 1291
Ecl136II GAGCTC 1 cut(s) 353
EclXI CGGCCG 1 cut(s) 1291
Eco130I CCWWGG 1 cut(s) 933
Eco24I GRGCYC 1 cut(s) 355
Eco31I GGTCTC 1 cut(s) 1020
Eco47III AGCGCT 1 cut(s) 66
Eco52I CGGCCG 1 cut(s) 1291
Eco53kI GAGCTC 1 cut(s) 353
Eco57I CTGAAG 2 cut(s) 98, 780
Eco88I CYCGRG 1 cut(s) 262
Eco91I GGTNACC 1 cut(s) 1821
EcoICRI GAGCTC 1 cut(s) 353
EcoO65I GGTNACC 1 cut(s) 1821
EcoRII CCWGG 2 cut(s) 346, 957
EcoT14I CCWWGG 1 cut(s) 933
EcoT22I ATGCAT 1 cut(s) 219
EcoT38I GRGCYC 1 cut(s) 355
ErhI CCWWGG 1 cut(s) 933
Esp3I CGTCTC 1 cut(s) 1290
FaeI CATG 8 cut(s) 196, 217, 332, 499, 587, 599, 641, 1221
FaqI GGGAC 5 cut(s) 976, 1020, 1214, 1425, 1780
FatI CATG 8 cut(s) 192, 213, 328, 495, 583, 595, 637, 1217
FauI CCCGC 3 cut(s) 881, 1232, 1474
FauNDI CATATG 1 cut(s) 1353
FbaI TGATCA 5 cut(s) 25, 1048, 1099, 1150, 1252
FblI GTMKAC 3 cut(s) 277, 686, 1947
Fnu4HI GCNGC 5 cut(s) 784, 969, 993, 996, 1974
FokI GGATG 4 cut(s) 512, 727, 731, 1262
FriOI GRGCYC 1 cut(s) 355
Fsp4HI GCNGC 5 cut(s) 784, 969, 993, 996, 1974
FspBI CTAG 7 cut(s) 45, 188, 546, 690, 1019, 1770, 1827
GlaI GCGC 3 cut(s) 66, 1340, 1683
GluI GCNGC 5 cut(s) 784, 969, 993, 996, 1974
GsaI CCCAGC 3 cut(s) 250, 1007, 1835
GsuI CTGGAG 2 cut(s) 273, 369
HaeII RGCGCY 1 cut(s) 68
HaeIII GGCC 5 cut(s) 446, 980, 1293, 1619, 1867
HapII CCGG 1 cut(s) 1433
HgaI GACGC 2 cut(s) 294, 1688
HhaI GCGC 3 cut(s) 67, 1341, 1684
Hin1I GRCGYC 2 cut(s) 305, 1299
Hin1II CATG 8 cut(s) 196, 217, 332, 499, 587, 599, 641, 1221
Hin6I GCGC 3 cut(s) 65, 1339, 1682
HinP1I GCGC 3 cut(s) 65, 1339, 1682
HincII GTYRAC 1 cut(s) 145
HindII GTYRAC 1 cut(s) 145
HindIII AAGCTT 1 cut(s) 1837
HinfI GANTC 8 cut(s) 701, 791, 1061, 1172, 1270, 1424, 1716, 1886
HpaII CCGG 1 cut(s) 1433
HphI GGTGA 8 cut(s) 490, 534, 773, 893, 1159, 1385, 1466, 1810
Hpy166II GTNNAC 8 cut(s) 145, 278, 687, 1182, 1349, 1376, 1664, 1948
Hpy188III TCNNGA 4 cut(s) 293, 1697, 1843, 1910
Hpy8I GTNNAC 8 cut(s) 145, 278, 687, 1182, 1349, 1376, 1664, 1948
Hpy99I CGWCG 6 cut(s) 180, 1304, 1307, 1448, 1451, 1682
HpyAV CCTTC 7 cut(s) 134, 1252, 1278, 1503, 1522, 1694, 1785
HpyCH4III ACNGT 7 cut(s) 14, 574, 616, 646, 1179, 1346, 1821
HpyCH4IV ACGT 6 cut(s) 175, 369, 627, 1299, 1651, 1998
HpyCH4V TGCA 8 cut(s) 17, 213, 217, 380, 484, 1182, 1221, 1386
HpyF10VI GCNNNNNNNGC 8 cut(s) 14, 62, 210, 243, 325, 977, 1836, 1970
HpyF3I CTNAG 6 cut(s) 671, 820, 856, 869, 1422, 2006
HpySE526I ACGT 6 cut(s) 175, 369, 627, 1299, 1651, 1998
Hsp92I GRCGYC 2 cut(s) 305, 1299
Hsp92II CATG 8 cut(s) 196, 217, 332, 499, 587, 599, 641, 1221
HspAI GCGC 3 cut(s) 65, 1339, 1682
Ksp22I TGATCA 5 cut(s) 25, 1048, 1099, 1150, 1252
LmnI GCTCC 4 cut(s) 53, 201, 254, 350
Lsp1109I GCAGC 2 cut(s) 770, 1985
LweI GCATC 5 cut(s) 213, 389, 471, 709, 777
MaeI CTAG 7 cut(s) 45, 188, 546, 690, 1019, 1770, 1827
MaeII ACGT 6 cut(s) 175, 369, 627, 1299, 1651, 1998
MboII GAAGA 8 cut(s) 91, 241, 786, 1184, 1198, 1601, 1620, 1638
MfeI CAATTG 1 cut(s) 1138
MflI RGATCY 1 cut(s) 865
MhlI GDGCHC 2 cut(s) 355, 1184
MlsI TGGCCA 2 cut(s) 1619, 1867
MluCI AATT 9 cut(s) 136, 232, 521, 549, 1138, 1579, 1779, 1861, 1916
MluNI TGGCCA 2 cut(s) 1619, 1867
MlyI GAGTC 2 cut(s) 1433, 1895
MmeI TCCRAC 2 cut(s) 1429, 1897
Mox20I TGGCCA 2 cut(s) 1619, 1867
Mph1103I ATGCAT 1 cut(s) 219
MscI TGGCCA 2 cut(s) 1619, 1867
MseI TTAA 1 cut(s) 1860
MslI CAYNNNNRTG 1 cut(s) 47
Msp20I TGGCCA 2 cut(s) 1619, 1867
MspA1I CMGCKG 1 cut(s) 1148
MspI CCGG 1 cut(s) 1433
MspR9I CCNGG 2 cut(s) 348, 959
MunI CAATTG 1 cut(s) 1138
MvaI CCWGG 2 cut(s) 348, 959
MvnI CGCG 2 cut(s) 1339, 1682
MwoI GCNNNNNNNGC 8 cut(s) 14, 62, 210, 243, 325, 977, 1836, 1970
NdeI CATATG 1 cut(s) 1353
NlaIII CATG 8 cut(s) 196, 217, 332, 499, 587, 599, 641, 1221
NlaIV GGNNCC 2 cut(s) 122, 343
NmeAIII GCCGAG 1 cut(s) 1319
NmuCI GTSAC 5 cut(s) 598, 623, 640, 653, 1040
NsiI ATGCAT 1 cut(s) 219
NspI RCATGY 3 cut(s) 217, 332, 1221
NspV TTCGAA 1 cut(s) 1635
PaeI GCATGC 2 cut(s) 217, 332
PcsI WCGNNNNNNNCGW 1 cut(s) 1296
PfeI GAWTC 6 cut(s) 701, 791, 1061, 1172, 1270, 1716
Pfl23II CGTACG 1 cut(s) 9
PflFI GACNNNGTC 4 cut(s) 174, 596, 638, 1301
PkrI GCNGC 5 cut(s) 785, 970, 994, 997, 1975
PleI GAGTC 2 cut(s) 1432, 1894
PpsI GAGTC 2 cut(s) 1432, 1894
Ppu21I YACGTR 1 cut(s) 628
PshAI GACNNNNGTC 1 cut(s) 1012
PsiI TTATAA 1 cut(s) 519
Psp124BI GAGCTC 1 cut(s) 355
Psp1406I AACGTT 1 cut(s) 369
Psp6I CCWGG 2 cut(s) 346, 957
PspEI GGTNACC 1 cut(s) 1821
PspFI CCCAGC 3 cut(s) 246, 1003, 1831
PspGI CCWGG 2 cut(s) 346, 957
PspLI CGTACG 1 cut(s) 9
PspN4I GGNNCC 2 cut(s) 122, 343
PstNI CAGNNNCTG 1 cut(s) 23
PsuI RGATCY 1 cut(s) 865
PsyI GACNNNGTC 4 cut(s) 174, 596, 638, 1301
PvuII CAGCTG 1 cut(s) 1148
RsaI GTAC 2 cut(s) 11, 1688
RsaNI GTAC 2 cut(s) 10, 1687
RseI CAYNNNNRTG 1 cut(s) 47
SacI GAGCTC 1 cut(s) 355
SaqAI TTAA 1 cut(s) 1860
SatI GCNGC 5 cut(s) 784, 969, 993, 996, 1974
SchI GAGTC 2 cut(s) 1433, 1895
ScrFI CCNGG 2 cut(s) 348, 959
SduI GDGCHC 2 cut(s) 355, 1184
SfaNI GCATC 5 cut(s) 213, 389, 471, 709, 777
SfcI CTRYAG 1 cut(s) 60
SfuI TTCGAA 1 cut(s) 1635
SmiMI CAYNNNNRTG 1 cut(s) 47
SmlI CTYRAG 1 cut(s) 1233
SmoI CTYRAG 1 cut(s) 1233
SpeI ACTAGT 1 cut(s) 689
SphI GCATGC 2 cut(s) 217, 332
Sse9I AATT 9 cut(s) 136, 232, 521, 549, 1138, 1579, 1779, 1861, 1916
SsiI CCGC 9 cut(s) 888, 968, 971, 992, 995, 1185, 1239, 1481, 1962
SspI AATATT 1 cut(s) 1570
SspMI CTAG 7 cut(s) 45, 188, 546, 690, 1019, 1770, 1827
SstI GAGCTC 1 cut(s) 355
StyD4I CCNGG 2 cut(s) 346, 957
StyI CCWWGG 1 cut(s) 933
TaaI ACNGT 7 cut(s) 14, 574, 616, 646, 1179, 1346, 1821
TaiI ACGT 6 cut(s) 178, 372, 630, 1302, 1654, 2001
TaqI TCGA 8 cut(s) 207, 268, 393, 742, 827, 1305, 1635, 1677
TaqII GACCGA 1 cut(s) 837
TasI AATT 9 cut(s) 136, 232, 521, 549, 1138, 1579, 1779, 1861, 1916
TatI WGTACW 1 cut(s) 1686
TauI GCSGC 3 cut(s) 971, 995, 998
TfiI GAWTC 6 cut(s) 701, 791, 1061, 1172, 1270, 1716
Tru1I TTAA 1 cut(s) 1860
Tru9I TTAA 1 cut(s) 1860
TscAI CASTG 5 cut(s) 607, 649, 1051, 1182, 1349
TseFI GTSAC 5 cut(s) 598, 623, 640, 653, 1040
TseI GCWGC 2 cut(s) 783, 1973
Tsp45I GTSAC 5 cut(s) 598, 623, 640, 653, 1040
TspDTI ATGAA 3 cut(s) 51, 1578, 1620
TspGWI ACGGA 1 cut(s) 962
TspRI CASTG 5 cut(s) 607, 649, 1051, 1182, 1349
Tth111I GACNNNGTC 4 cut(s) 174, 596, 638, 1301
VneI GTGCAC 1 cut(s) 1180
XapI RAATTY 3 cut(s) 136, 549, 1579
XceI RCATGY 3 cut(s) 217, 332, 1221
XmiI GTMKAC 3 cut(s) 277, 686, 1947
XspI CTAG 7 cut(s) 45, 188, 546, 690, 1019, 1770, 1827
ZraI GACGTC 1 cut(s) 1300
Zsp2I ATGCAT 1 cut(s) 219
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.