Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0003967

Physical Location & Seq

Genomic Coordinates Forward (+)

71314124 .. 71321314

Gene Structure 7191 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00050800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1581 bp

ATGAGGTTATACGATCAGAGGTTACTCGATCCCAAATTTCTTTTGGTTTTGTTTTGTGTTTGGTTTTGCTACTGTTGGGTTCAATGTTCTGTACTTGGTGACTTCCAGCTATTGTTTTGTACTCTGGACTTTGGCAATGGTGTACCTGTGAAAACTTCGGTGGAGCCTAAAGTATCTGAGGAAGGGCTTCTTGATGCTATTCAGCAGGATTACTTCTCATCTGCCTCCATAGAGAGTTTTGAATTACCTCTTACGGAATCAAAGGGGGTTGGGTCTGAAGGAAAGCCACTAGTCATCATTGATGATTACATAGGCTGCAGTAAGCCTCAGAAGCCGCTTGTCACTACACGAGCCATGGAGCATCTTCCCTTCAGGCAACTTCCAGCTGGAATTGGTGAGGATGTTATCATAAGGAAGACCAATCTCATTTCTCCTGAGGAGGCTCAGCGGCAAGCTGCTTTGTGGTACTCGCGATGTGACCATTGTATAAGCTTACGGCATAGTGAAACGGGATTATGGACCAGCCGAGATTTTAGCGAGCTACGTCGCCTACGTTTGGGTCCCAAAAATCCGGTGATTGCAGCTATGTCTCTTATGGCGTCGGGGGACACATTAACAGCTACCGCTATAGCGGAGTGTGAAGGGGCTGTTGTTACAGTAAAATCGATTGGGAAGTTGCGAGATGGTAAGAAATTTTTGAAGAAAGGTCATGGTGAAGGAGAAGCACCATTTGATTTCAAGAAAGACGAGGAGAAAGAGAATGAGGAGCTTGAAAAAACTGCAGTGACAATGAGAAAGGTTTTAGATGAAGCAAGTCTTCCTTCTAACTTCACGGATGCTATAATGGATGATGTCCTTTGCGCAATAGAGGCCATTACTTGCATCCCACGGTGTCTATATGCCATGTGTTTAAATAATAATGGTTTTCGTGCTATGAAAGATGCTTTGAGGTGCTTGGTGGAAATATTTACTTCAAGAAAATATTTGCGTGCTCTAACAAATGATAAACTGGGTGGATTAATGTGCCATGCTTCCTCATTATGTGGTCCCGATGTGGATATGTTAATTGGGATTTTAAATGCCATCTCAAATATTGGACACGGGGTTAATGCTTCTCTCACGTCAACTGCACTTTTGTCTTCTTCTACTCCTGTCTCCATAGAAGTTGATGGAGAAGAGAGGAATGTAGTCATGACAGATTATAGGGAGTCATCCAAAACGGATAGTTTGGAGCAGGGGACTGAACCATCTTCCGAGTCTTTAGTAGGATATGTTGAACTATTACTTCCTGGTTATGTAAGCAAGGTTGCACGTCTTCTTGAAATTGTACTTCAGAATGGTGACATTTGTCTTATAATTCTGGAGAAGAAGAGGATAGAACTTGTCCTGCGCTTGTTTACCTTGCCTTTAAGTCCGAGTATACCTATTGCATTTAAGAACTTCACACCACAACATTCTGCTTCTTTGGCGTATGCTACACGGACTACCAATCTCGATCACATTTATTGCAGTGGTTCACTCTTTGCTTTGAACTTTGTAATTGTGAGACAACAAAGGAGCCACCACTCTCTTGCGTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005829 GO:0005911 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009506 GO:0009987 GO:0016020 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0030054 GO:0032446 GO:0032991 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0055044 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

DUF4414 DUF908 DUF913 HECT UBA

Protein Analysis

526

Amino Acids

58.24

Weight (kDa)

5.62

Isoelectric Point (pI)

41.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF913	PF06025	264 - 472	3.8e-24	Domain of Unknown Function (DUF913)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003967)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr2g0101351 RchiOBHm_Chr4g0387901 RchiOBHm_Chr7g0182321 RchiOBHm_Chr7g0194411
rosa_laevigata	RLG00000004201 RLG00000004202 RLG00000022917
rosa_multiflora	Rmu_sc0002837.1_g000001 Rmu_sc0013203.1_g000002
rosa_roxburghii	Rroxscaffold_1G00009390 Rroxscaffold_1G00019360 Rroxscaffold_1G00050800 Rroxscaffold_2G00084810 Rroxscaffold_2G00130580 Rroxscaffold_2G00141360 Rroxscaffold_3G00222730 Rroxscaffold_3G00261360
rosa_rugosa	Rorug07G0015700
rosa_samantha	Rh2AG146200 Rh2AG296300 Rh2BG151600 Rh2CG152200 Rh2DG151700 Rh4AG019200 Rh5BG284100 Rh5BG303900 Rh6AG185400 Rh6AG328900 Rh7AG049900 Rh7AG142900 Rh7BG143400 Rh7CG147200 Rh7DG144800
rosa_wichuraiana	Rw7G012230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1355
Acc16I	TGCGCA	1 cut(s)	862
AccI	GTMKAC	1 cut(s)	1420
AccII	CGCG	1 cut(s)	472
AciI	CCGC	4 cut(s)	335, 448, 624, 632
AclWI	GGATC	1 cut(s)	23
AcsI	RAATTY	2 cut(s)	35, 692
AcuI	CTGAAG	3 cut(s)	297, 355, 1316
AcyI	GRCGYC	1 cut(s)	599
AfaI	GTAC	6 cut(s)	93, 121, 144, 467, 1329, 1577
AfiI	CCNNNNNNNGG	1 cut(s)	556
AgsI	TTSAA	9 cut(s)	83, 242, 700, 739, 773, 975, 1277, 1322, 1531
AhlI	ACTAGT	1 cut(s)	289
AjiI	CACGTC	2 cut(s)	1122, 1313
AjnI	CCWGG	1 cut(s)	1288
AluBI	AGCT	8 cut(s)	109, 386, 455, 492, 541, 584, 620, 769
AluI	AGCT	8 cut(s)	109, 386, 455, 492, 541, 584, 620, 769
Alw21I	GWGCWC	1 cut(s)	994
Alw26I	GTCTC	3 cut(s)	594, 1159, 1540
AlwI	GGATC	1 cut(s)	23
AoxI	GGCC	1 cut(s)	870
ApeKI	GCWGC	3 cut(s)	315, 455, 581
ApoI	RAATTY	2 cut(s)	35, 692
AseI	ATTAAT	1 cut(s)	1019
Asp700I	GAANNNNTTC	1 cut(s)	186
AspLEI	GCGC	2 cut(s)	863, 1392
AspS9I	GGNCC	3 cut(s)	519, 560, 1046
AsuHPI	GGTGA	5 cut(s)	110, 407, 586, 725, 1352
AvaII	GGWCC	3 cut(s)	519, 560, 1046
AxyI	CCTNAGG	1 cut(s)	435
BauI	CACGAG	1 cut(s)	348
BbsI	GAAGAC	4 cut(s)	422, 809, 1131, 1307
Bbv12I	GWGCWC	1 cut(s)	994
BbvI	GCAGC	3 cut(s)	302, 442, 593
BccI	CCATC	4 cut(s)	677, 1091, 1163, 1255
BceAI	ACGGC	1 cut(s)	512
BciT130I	CCWGG	1 cut(s)	1290
BcoDI	GTCTC	3 cut(s)	594, 1159, 1540
BcuI	ACTAGT	1 cut(s)	289
BfaI	CTAG	1 cut(s)	290
BfmI	CTRYAG	3 cut(s)	316, 627, 780
BisI	GCNGC	5 cut(s)	316, 335, 449, 456, 582
BlpI	GCTNAGC	1 cut(s)	444
BlsI	GCNGC	5 cut(s)	317, 336, 450, 457, 583
Bme1390I	CCNGG	1 cut(s)	1290
Bme18I	GGWCC	3 cut(s)	519, 560, 1046
BmgBI	CACGTC	2 cut(s)	1122, 1313
BmgT120I	GGNCC	3 cut(s)	519, 560, 1046
BmiI	GGNNCC	5 cut(s)	165, 561, 562, 1048, 1559
BmrFI	CCNGG	1 cut(s)	1290
BmrI	ACTGGG	1 cut(s)	1019
BmsI	GCATC	5 cut(s)	184, 370, 826, 891, 931
BmuI	ACTGGG	1 cut(s)	1019
BoxI	GACNNNNGTC	1 cut(s)	1347
BpiI	GAAGAC	4 cut(s)	422, 809, 1131, 1307
BpmI	CTGGAG	1 cut(s)	1382
Bpu1102I	GCTNAGC	1 cut(s)	444
Bsa29I	ATCGAT	1 cut(s)	665
BsaHI	GRCGYC	1 cut(s)	599
BsaJI	CCNNGG	2 cut(s)	354, 887
BsaWI	WCCGGW	1 cut(s)	571
Bsc4I	CCNNNNNNNGG	1 cut(s)	556
Bse1I	ACTGG	1 cut(s)	1014
Bse21I	CCTNAGG	1 cut(s)	435
Bse3DI	GCAATG	1 cut(s)	142
BseBI	CCWGG	1 cut(s)	1290
BseCI	ATCGAT	1 cut(s)	665
BseDI	CCNNGG	2 cut(s)	354, 887
BseGI	GGATG	5 cut(s)	406, 841, 853, 882, 1211
BseLI	CCNNNNNNNGG	1 cut(s)	556
BseMI	GCAATG	1 cut(s)	142
BseMII	CTCAG	4 cut(s)	168, 341, 426, 458
BseNI	ACTGG	1 cut(s)	1014
BseRI	GAGGAG	3 cut(s)	452, 764, 779
BseXI	GCAGC	3 cut(s)	302, 442, 593
BsgI	GTGCAG	1 cut(s)	1113
Bsh1236I	CGCG	1 cut(s)	472
BshFI	GGCC	1 cut(s)	872
BshVI	ATCGAT	1 cut(s)	665
BsiHKAI	GWGCWC	1 cut(s)	994
BsiSI	CCGG	1 cut(s)	572
BslFI	GGGAC	4 cut(s)	546, 620, 1032, 1252
BslI	CCNNNNNNNGG	1 cut(s)	556
BsmAI	GTCTC	3 cut(s)	594, 1159, 1540
BsmFI	GGGAC	4 cut(s)	546, 620, 1032, 1252
BsnI	GGCC	1 cut(s)	872
Bsp1286I	GDGCHC	1 cut(s)	994
Bsp143I	GATC	3 cut(s)	13, 28, 1495
Bsp1720I	GCTNAGC	1 cut(s)	444
Bsp19I	CCATGG	1 cut(s)	354
Bsp68I	TCGCGA	1 cut(s)	472
BspACI	CCGC	4 cut(s)	335, 448, 624, 632
BspANI	GGCC	1 cut(s)	872
BspCNI	CTCAG	4 cut(s)	169, 340, 427, 457
BspDI	ATCGAT	1 cut(s)	665
BspFNI	CGCG	1 cut(s)	472
BspHI	TCATGA	1 cut(s)	1191
BspLI	GGNNCC	5 cut(s)	165, 561, 562, 1048, 1559
BspMAI	CTGCAG	2 cut(s)	320, 784
BspPI	GGATC	1 cut(s)	23
BsrDI	GCAATG	1 cut(s)	142
BsrI	ACTGG	1 cut(s)	1014
BssECI	CCNNGG	2 cut(s)	354, 887
BssMI	GATC	3 cut(s)	13, 28, 1495
BssNAI	GTATAC	1 cut(s)	1421
BssNI	GRCGYC	1 cut(s)	599
BssSI	CACGAG	1 cut(s)	348
BssT1I	CCWWGG	1 cut(s)	354
Bst1107I	GTATAC	1 cut(s)	1421
Bst2BI	CACGAG	1 cut(s)	348
Bst2UI	CCWGG	1 cut(s)	1290
Bst4CI	ACNGT	3 cut(s)	74, 658, 891
Bst6I	CTCTTC	2 cut(s)	1170, 1364
BstACI	GRCGYC	1 cut(s)	599
BstC8I	GCNNGC	3 cut(s)	453, 539, 990
BstDEI	CTNAG	4 cut(s)	177, 327, 435, 444
BstDSI	CCRYGG	2 cut(s)	354, 887
BstF5I	GGATG	5 cut(s)	406, 841, 853, 882, 1211
BstFNI	CGCG	1 cut(s)	472
BstHHI	GCGC	2 cut(s)	863, 1392
BstKTI	GATC	3 cut(s)	16, 31, 1498
BstMAI	GTCTC	3 cut(s)	594, 1159, 1540
BstMBI	GATC	3 cut(s)	13, 28, 1495
BstMWI	GCNNNNNNNGC	3 cut(s)	331, 869, 1466
BstNI	CCWGG	1 cut(s)	1290
BstPAI	GACNNNNGTC	1 cut(s)	1347
BstSCI	CCNGG	1 cut(s)	1288
BstSFI	CTRYAG	3 cut(s)	316, 627, 780
BstUI	CGCG	1 cut(s)	472
BstV1I	GCAGC	3 cut(s)	302, 442, 593
BstV2I	GAAGAC	4 cut(s)	422, 809, 1131, 1307
BstZ17I	GTATAC	1 cut(s)	1421
Bsu15I	ATCGAT	1 cut(s)	665
Bsu36I	CCTNAGG	1 cut(s)	435
BsuRI	GGCC	1 cut(s)	872
BsuTUI	ATCGAT	1 cut(s)	665
BtgI	CCRYGG	2 cut(s)	354, 887
BtgZI	GCGATG	1 cut(s)	487
BtrI	CACGTC	2 cut(s)	1122, 1313
BtsCI	GGATG	5 cut(s)	406, 841, 853, 882, 1211
BtsI	GCAGTG	2 cut(s)	789, 1516
BtsIMutI	CAGTG	2 cut(s)	789, 1516
BtuMI	TCGCGA	1 cut(s)	472
Cac8I	GCNNGC	3 cut(s)	453, 539, 990
CciI	TCATGA	1 cut(s)	1191
CfoI	GCGC	2 cut(s)	863, 1392
Cfr13I	GGNCC	3 cut(s)	519, 560, 1046
ClaI	ATCGAT	1 cut(s)	665
CseI	GACGC	1 cut(s)	588
Csp6I	GTAC	6 cut(s)	92, 120, 143, 466, 1328, 1576
CviAII	CATG	5 cut(s)	355, 710, 904, 1028, 1192
CviQI	GTAC	6 cut(s)	92, 120, 143, 466, 1328, 1576
DdeI	CTNAG	4 cut(s)	177, 327, 435, 444
DpnI	GATC	3 cut(s)	15, 30, 1497
DpnII	GATC	3 cut(s)	13, 28, 1495
DraI	TTTAAA	2 cut(s)	912, 1077
Eam1104I	CTCTTC	2 cut(s)	1170, 1364
EarI	CTCTTC	2 cut(s)	1170, 1364
Eco130I	CCWWGG	1 cut(s)	354
Eco47I	GGWCC	3 cut(s)	519, 560, 1046
Eco57I	CTGAAG	3 cut(s)	297, 355, 1316
Eco81I	CCTNAGG	1 cut(s)	435
EcoO109I	RGGNCCY	1 cut(s)	560
EcoRII	CCWGG	1 cut(s)	1288
EcoT14I	CCWWGG	1 cut(s)	354
ErhI	CCWWGG	1 cut(s)	354
FaeI	CATG	5 cut(s)	358, 713, 907, 1031, 1195
FalI	AAGNNNNNCTT	6 cut(s)	174, 206, 801, 833, 805, 837
FaqI	GGGAC	4 cut(s)	546, 620, 1032, 1252
FatI	CATG	5 cut(s)	354, 709, 903, 1027, 1191
FblI	GTMKAC	1 cut(s)	1420
Fnu4HI	GCNGC	5 cut(s)	316, 335, 449, 456, 582
FokI	GGATG	5 cut(s)	413, 848, 860, 869, 1198
Fsp4HI	GCNGC	5 cut(s)	316, 335, 449, 456, 582
FspBI	CTAG	1 cut(s)	290
FspI	TGCGCA	1 cut(s)	862
GlaI	GCGC	2 cut(s)	862, 1391
GluI	GCNGC	5 cut(s)	316, 335, 449, 456, 582
GsuI	CTGGAG	1 cut(s)	1382
HaeIII	GGCC	1 cut(s)	872
HapII	CCGG	1 cut(s)	572
HgaI	GACGC	1 cut(s)	588
HhaI	GCGC	2 cut(s)	863, 1392
Hin1I	GRCGYC	1 cut(s)	599
Hin1II	CATG	5 cut(s)	358, 713, 907, 1031, 1195
Hin6I	GCGC	2 cut(s)	861, 1390
HinP1I	GCGC	2 cut(s)	861, 1390
HincII	GTYRAC	1 cut(s)	1125
HindII	GTYRAC	1 cut(s)	1125
HindIII	AAGCTT	1 cut(s)	490
HinfI	GANTC	3 cut(s)	257, 1208, 1256
HpaII	CCGG	1 cut(s)	572
HphI	GGTGA	5 cut(s)	110, 407, 586, 725, 1352
Hpy166II	GTNNAC	5 cut(s)	143, 1125, 1398, 1421, 1517
Hpy188I	TCNGA	7 cut(s)	18, 178, 277, 330, 1255, 1335, 1416
Hpy8I	GTNNAC	5 cut(s)	143, 1125, 1398, 1421, 1517
Hpy99I	CGWCG	2 cut(s)	549, 604
HpyAV	CCTTC	6 cut(s)	176, 272, 379, 635, 710, 831
HpyCH4III	ACNGT	3 cut(s)	74, 658, 891
HpyCH4IV	ACGT	4 cut(s)	544, 553, 1121, 1312
HpyCH4V	TGCA	8 cut(s)	318, 581, 782, 882, 1130, 1310, 1430, 1509
HpyF10VI	GCNNNNNNNGC	3 cut(s)	331, 869, 1466
HpyF3I	CTNAG	4 cut(s)	177, 327, 435, 444
HpySE526I	ACGT	4 cut(s)	544, 553, 1121, 1312
Hsp92I	GRCGYC	1 cut(s)	599
Hsp92II	CATG	5 cut(s)	358, 713, 907, 1031, 1195
HspAI	GCGC	2 cut(s)	861, 1390
KflI	GGGWCCC	1 cut(s)	560
Kzo9I	GATC	3 cut(s)	13, 28, 1495
LmnI	GCTCC	5 cut(s)	163, 358, 766, 1231, 1557
Lsp1109I	GCAGC	3 cut(s)	302, 442, 593
LweI	GCATC	5 cut(s)	184, 370, 826, 891, 931
MaeI	CTAG	1 cut(s)	290
MaeII	ACGT	4 cut(s)	544, 553, 1121, 1312
MaeIII	GTNAC	7 cut(s)	21, 98, 340, 476, 652, 784, 1340
MalI	GATC	3 cut(s)	15, 30, 1497
MboI	GATC	3 cut(s)	13, 28, 1495
MhlI	GDGCHC	1 cut(s)	994
MluCI	AATT	8 cut(s)	35, 242, 390, 692, 1065, 1323, 1356, 1539
MlyI	GAGTC	2 cut(s)	1217, 1265
MroXI	GAANNNNTTC	1 cut(s)	186
MseI	TTAA	8 cut(s)	614, 911, 1019, 1064, 1076, 1107, 1409, 1434
MspA1I	CMGCKG	2 cut(s)	386, 448
MspI	CCGG	1 cut(s)	572
MspR9I	CCNGG	1 cut(s)	1290
MvaI	CCWGG	1 cut(s)	1290
MvnI	CGCG	1 cut(s)	472
MwoI	GCNNNNNNNGC	3 cut(s)	331, 869, 1466
NcoI	CCATGG	1 cut(s)	354
NdeII	GATC	3 cut(s)	13, 28, 1495
NlaIII	CATG	5 cut(s)	358, 713, 907, 1031, 1195
NlaIV	GGNNCC	5 cut(s)	165, 561, 562, 1048, 1559
NmeAIII	GCCGAG	1 cut(s)	551
NmuCI	GTSAC	5 cut(s)	98, 340, 476, 784, 1340
NruI	TCGCGA	1 cut(s)	472
NsbI	TGCGCA	1 cut(s)	862
PagI	TCATGA	1 cut(s)	1191
PcsI	WCGNNNNNNNCGW	1 cut(s)	550
PdmI	GAANNNNTTC	1 cut(s)	186
PfeI	GAWTC	1 cut(s)	257
PkrI	GCNGC	5 cut(s)	317, 336, 450, 457, 583
PleI	GAGTC	2 cut(s)	1216, 1264
PpsI	GAGTC	2 cut(s)	1216, 1264
PpuMI	RGGWCCY	1 cut(s)	560
PshAI	GACNNNNGTC	1 cut(s)	1347
PshBI	ATTAAT	1 cut(s)	1019
PsiI	TTATAA	1 cut(s)	1355
Psp5II	RGGWCCY	1 cut(s)	560
Psp6I	CCWGG	1 cut(s)	1288
PspGI	CCWGG	1 cut(s)	1288
PspN4I	GGNNCC	5 cut(s)	165, 561, 562, 1048, 1559
PspPI	GGNCC	3 cut(s)	519, 560, 1046
PspPPI	RGGWCCY	1 cut(s)	560
PstI	CTGCAG	2 cut(s)	320, 784
PvuII	CAGCTG	1 cut(s)	386
RruI	TCGCGA	1 cut(s)	472
RsaI	GTAC	6 cut(s)	93, 121, 144, 467, 1329, 1577
RsaNI	GTAC	6 cut(s)	92, 120, 143, 466, 1328, 1576
SaqAI	TTAA	8 cut(s)	614, 911, 1019, 1064, 1076, 1107, 1409, 1434
SatI	GCNGC	5 cut(s)	316, 335, 449, 456, 582
Sau3AI	GATC	3 cut(s)	13, 28, 1495
Sau96I	GGNCC	3 cut(s)	519, 560, 1046
SchI	GAGTC	2 cut(s)	1217, 1265
ScrFI	CCNGG	1 cut(s)	1290
SduI	GDGCHC	1 cut(s)	994
SfaNI	GCATC	5 cut(s)	184, 370, 826, 891, 931
SfcI	CTRYAG	3 cut(s)	316, 627, 780
SinI	GGWCC	3 cut(s)	519, 560, 1046
SpeI	ACTAGT	1 cut(s)	289
Sse9I	AATT	8 cut(s)	35, 242, 390, 692, 1065, 1323, 1356, 1539
SsiI	CCGC	4 cut(s)	335, 448, 624, 632
SspI	AATATT	3 cut(s)	966, 983, 1093
SspMI	CTAG	1 cut(s)	290
StyD4I	CCNGG	1 cut(s)	1288
StyI	CCWWGG	1 cut(s)	354
TaaI	ACNGT	3 cut(s)	74, 658, 891
TaiI	ACGT	4 cut(s)	547, 556, 1124, 1315
TaqI	TCGA	3 cut(s)	27, 665, 1494
TasI	AATT	8 cut(s)	35, 242, 390, 692, 1065, 1323, 1356, 1539
TatI	WGTACW	3 cut(s)	91, 119, 1327
TauI	GCSGC	2 cut(s)	337, 451
TfiI	GAWTC	1 cut(s)	257
Tru1I	TTAA	8 cut(s)	614, 911, 1019, 1064, 1076, 1107, 1409, 1434
Tru9I	TTAA	8 cut(s)	614, 911, 1019, 1064, 1076, 1107, 1409, 1434
TscAI	CASTG	2 cut(s)	789, 1516
TseFI	GTSAC	5 cut(s)	98, 340, 476, 784, 1340
TseI	GCWGC	3 cut(s)	315, 455, 581
Tsp45I	GTSAC	5 cut(s)	98, 340, 476, 784, 1340
TspDTI	ATGAA	2 cut(s)	822, 950
TspGWI	ACGGA	4 cut(s)	269, 848, 1235, 1495
TspRI	CASTG	2 cut(s)	789, 1516
VpaK11BI	GGWCC	3 cut(s)	519, 560, 1046
VspI	ATTAAT	1 cut(s)	1019
XapI	RAATTY	2 cut(s)	35, 692
XcmI	CCANNNNNNNNNTGG	1 cut(s)	40
XmiI	GTMKAC	1 cut(s)	1420
XmnI	GAANNNNTTC	1 cut(s)	186
XspI	CTAG	1 cut(s)	290

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.